|
--- |
|
license: cc-by-4.0 |
|
language: |
|
- es |
|
base_model: PlanTL-GOB-ES/bsc-bio-ehr-es |
|
--- |
|
|
|
# Training data |
|
|
|
Model trained on the species mentions of both [CARMEN-I](https://zenodo.org/records/10171540) and [LivingNER](https://doi.org/10.5281/zenodo.7684093). |
|
|
|
# Citation |
|
Please cite the following works: |
|
|
|
``` |
|
@article{livingner, |
|
title = {{Mention detection, normalization \& classification of species, pathogens, humans and food in clinical documents: Overview of LivingNER shared task and resources}}, |
|
author = {Miranda-Escalada, Antonio and Farr{\'e}-Maduell, Eul{`a}lia and Lima-L{\'o}pez, Salvador and Estrada, Darryl and Gasc{\'o}, Luis and Krallinger, Martin}, |
|
journal = {Procesamiento del Lenguaje Natural}, |
|
year = {2022} |
|
} |
|
|
|
@misc{carmen_physionet, |
|
author = {Farre Maduell, Eulalia and Lima-Lopez, Salvador and Frid, Santiago Andres and Conesa, Artur and Asensio, Elisa and Lopez-Rueda, Antonio and Arino, Helena and Calvo, Elena and Bertran, Maria Jesús and Marcos, Maria Angeles and Nofre Maiz, Montserrat and Tañá Velasco, Laura and Marti, Antonia and Farreres, Ricardo and Pastor, Xavier and Borrat Frigola, Xavier and Krallinger, Martin}, |
|
title = {{CARMEN-I: A resource of anonymized electronic health records in Spanish and Catalan for training and testing NLP tools (version 1.0.1)}}, |
|
year = {2024}, |
|
publisher = {PhysioNet}, |
|
url = {https://doi.org/10.13026/x7ed-9r91} |
|
} |
|
|
|
@article{physionet, |
|
author = {Ary L. Goldberger and Luis A. N. Amaral and Leon Glass and Jeffrey M. Hausdorff and Plamen Ch. Ivanov and Roger G. Mark and Joseph E. Mietus and George B. Moody and Chung-Kang Peng and H. Eugene Stanley }, |
|
title = {PhysioBank, PhysioToolkit, and PhysioNet }, |
|
journal = {Circulation}, |
|
volume = {101}, |
|
number = {23}, |
|
pages = {e215-e220}, |
|
year = {2000}, |
|
doi = {10.1161/01.CIR.101.23.e215}, |
|
URL = {https://www.ahajournals.org/doi/abs/10.1161/01.CIR.101.23.e215} |
|
} |
|
``` |
|
|
|
# Contacting authors |
|
jan.rodriguez [at] bsc.es |
|
|
|
## More information on data, usage, limitations, and performance metrics soon |
