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Upload 176d_MC with huggingface_hub

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  1. 176d_MC +239 -0
176d_MC ADDED
@@ -0,0 +1,239 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Residue conformations -------------------------------------------
2
+ A1 : GPN
3
+ A2 : APN
4
+ A3 : APN
5
+ A4 : CPN
6
+ A5 : TPN
7
+ A6 : CPN
8
+ B7 : G C2p_exo anti
9
+ B8 : A C2p_exo anti
10
+ B9 : G C3p_endo anti
11
+ B10 : U C3p_endo anti
12
+ B11 : U C3p_endo anti
13
+ B12 : C C3p_endo anti
14
+ Adjacent stackings ----------------------------------------------
15
+ B7-B8 : adjacent_5p upward
16
+ B8-B9 : adjacent_5p upward
17
+ B9-B10 : adjacent_5p upward
18
+ B11-B12 : adjacent_5p upward
19
+ Non-Adjacent stackings ------------------------------------------
20
+ Number of stackings = 4
21
+ Number of adjacent stackings = 4
22
+ Number of non adjacent stackings = 0
23
+ Base-pairs ------------------------------------------------------
24
+ A1-B12 : GPN-C pairing parallel one_hbond
25
+ Residue conformations -------------------------------------------
26
+ A1 : GPN
27
+ A2 : APN
28
+ A3 : APN
29
+ A4 : CPN
30
+ A5 : TPN
31
+ A6 : CPN
32
+ B7 : G C2p_exo anti
33
+ B8 : A C3p_endo anti
34
+ B9 : G C3p_endo anti
35
+ B10 : U C3p_endo anti
36
+ B11 : U C3p_endo anti
37
+ B12 : C C3p_endo anti
38
+ Adjacent stackings ----------------------------------------------
39
+ B7-B8 : adjacent_5p upward
40
+ B8-B9 : adjacent_5p upward
41
+ B9-B10 : adjacent_5p upward
42
+ B11-B12 : adjacent_5p upward
43
+ Non-Adjacent stackings ------------------------------------------
44
+ Number of stackings = 4
45
+ Number of adjacent stackings = 4
46
+ Number of non adjacent stackings = 0
47
+ Base-pairs ------------------------------------------------------
48
+ A1-B12 : GPN-C pairing parallel one_hbond
49
+ Residue conformations -------------------------------------------
50
+ A1 : GPN
51
+ A2 : APN
52
+ A3 : APN
53
+ A4 : CPN
54
+ A5 : TPN
55
+ A6 : CPN
56
+ B7 : G C2p_exo anti
57
+ B8 : A C3p_endo anti
58
+ B9 : G C3p_endo anti
59
+ B10 : U C3p_endo anti
60
+ B11 : U C3p_endo anti
61
+ B12 : C C3p_endo anti
62
+ Adjacent stackings ----------------------------------------------
63
+ B7-B8 : adjacent_5p upward
64
+ B8-B9 : adjacent_5p upward
65
+ B9-B10 : adjacent_5p upward
66
+ Non-Adjacent stackings ------------------------------------------
67
+ Number of stackings = 3
68
+ Number of adjacent stackings = 3
69
+ Number of non adjacent stackings = 0
70
+ Base-pairs ------------------------------------------------------
71
+ A1-B12 : GPN-C pairing parallel one_hbond
72
+ Residue conformations -------------------------------------------
73
+ A1 : GPN
74
+ A2 : APN
75
+ A3 : APN
76
+ A4 : CPN
77
+ A5 : TPN
78
+ A6 : CPN
79
+ B7 : G C2p_exo anti
80
+ B8 : A C3p_endo anti
81
+ B9 : G C2p_exo anti
82
+ B10 : U C3p_endo anti
83
+ B11 : U C3p_endo anti
84
+ B12 : C C3p_endo anti
85
+ Adjacent stackings ----------------------------------------------
86
+ B7-B8 : adjacent_5p upward
87
+ B8-B9 : adjacent_5p upward
88
+ B9-B10 : adjacent_5p upward
89
+ B11-B12 : adjacent_5p upward
90
+ Non-Adjacent stackings ------------------------------------------
91
+ Number of stackings = 4
92
+ Number of adjacent stackings = 4
93
+ Number of non adjacent stackings = 0
94
+ Base-pairs ------------------------------------------------------
95
+ A1-B12 : GPN-C pairing parallel one_hbond
96
+ Residue conformations -------------------------------------------
97
+ A1 : GPN
98
+ A2 : APN
99
+ A3 : APN
100
+ A4 : CPN
101
+ A5 : TPN
102
+ A6 : CPN
103
+ B7 : G C2p_exo anti
104
+ B8 : A C3p_endo anti
105
+ B9 : G C2p_exo anti
106
+ B10 : U C3p_endo anti
107
+ B11 : U C3p_endo anti
108
+ B12 : C C3p_endo anti
109
+ Adjacent stackings ----------------------------------------------
110
+ B7-B8 : adjacent_5p upward
111
+ B8-B9 : adjacent_5p upward
112
+ B9-B10 : adjacent_5p upward
113
+ B10-B11 : adjacent_5p upward
114
+ B11-B12 : adjacent_5p upward
115
+ Non-Adjacent stackings ------------------------------------------
116
+ Number of stackings = 5
117
+ Number of adjacent stackings = 5
118
+ Number of non adjacent stackings = 0
119
+ Base-pairs ------------------------------------------------------
120
+ A1-B12 : GPN-C pairing parallel one_hbond
121
+ Residue conformations -------------------------------------------
122
+ A1 : GPN
123
+ A2 : APN
124
+ A3 : APN
125
+ A4 : CPN
126
+ A5 : TPN
127
+ A6 : CPN
128
+ B7 : G C2p_exo anti
129
+ B8 : A C3p_endo anti
130
+ B9 : G C2p_exo anti
131
+ B10 : U C3p_endo anti
132
+ B11 : U C3p_endo anti
133
+ B12 : C C3p_endo anti
134
+ Adjacent stackings ----------------------------------------------
135
+ B7-B8 : adjacent_5p upward
136
+ B8-B9 : adjacent_5p upward
137
+ B9-B10 : adjacent_5p upward
138
+ Non-Adjacent stackings ------------------------------------------
139
+ Number of stackings = 3
140
+ Number of adjacent stackings = 3
141
+ Number of non adjacent stackings = 0
142
+ Base-pairs ------------------------------------------------------
143
+ A1-B12 : GPN-C pairing parallel one_hbond
144
+ Residue conformations -------------------------------------------
145
+ A1 : GPN
146
+ A2 : APN
147
+ A3 : APN
148
+ A4 : CPN
149
+ A5 : TPN
150
+ A6 : CPN
151
+ B7 : G C2p_exo anti
152
+ B8 : A C3p_endo anti
153
+ B9 : G C3p_endo anti
154
+ B10 : U C3p_endo anti
155
+ B11 : U C3p_endo anti
156
+ B12 : C C3p_endo anti
157
+ Adjacent stackings ----------------------------------------------
158
+ B7-B8 : adjacent_5p upward
159
+ B8-B9 : adjacent_5p upward
160
+ B9-B10 : adjacent_5p upward
161
+ B11-B12 : adjacent_5p upward
162
+ Non-Adjacent stackings ------------------------------------------
163
+ Number of stackings = 4
164
+ Number of adjacent stackings = 4
165
+ Number of non adjacent stackings = 0
166
+ Base-pairs ------------------------------------------------------
167
+ A1-B12 : GPN-C pairing parallel one_hbond
168
+ Residue conformations -------------------------------------------
169
+ A1 : GPN
170
+ A2 : APN
171
+ A3 : APN
172
+ A4 : CPN
173
+ A5 : TPN
174
+ A6 : CPN
175
+ B7 : G C2p_exo anti
176
+ B8 : A C3p_endo anti
177
+ B9 : G C2p_exo anti
178
+ B10 : U C3p_endo anti
179
+ B11 : U C3p_endo anti
180
+ B12 : C C3p_endo anti
181
+ Adjacent stackings ----------------------------------------------
182
+ B7-B8 : adjacent_5p upward
183
+ B8-B9 : adjacent_5p upward
184
+ B9-B10 : adjacent_5p upward
185
+ B10-B11 : adjacent_5p upward
186
+ B11-B12 : adjacent_5p upward
187
+ Non-Adjacent stackings ------------------------------------------
188
+ Number of stackings = 5
189
+ Number of adjacent stackings = 5
190
+ Number of non adjacent stackings = 0
191
+ Base-pairs ------------------------------------------------------
192
+ A1-B12 : GPN-C pairing parallel one_hbond
193
+ Residue conformations -------------------------------------------
194
+ A1 : GPN
195
+ A2 : APN
196
+ A3 : APN
197
+ A4 : CPN
198
+ A5 : TPN
199
+ A6 : CPN
200
+ B7 : G C2p_exo anti
201
+ B8 : A C3p_endo anti
202
+ B9 : G C3p_endo anti
203
+ B10 : U C3p_endo anti
204
+ B11 : U C3p_endo anti
205
+ B12 : C C3p_endo anti
206
+ Adjacent stackings ----------------------------------------------
207
+ B7-B8 : adjacent_5p upward
208
+ B8-B9 : adjacent_5p upward
209
+ B9-B10 : adjacent_5p upward
210
+ B11-B12 : adjacent_5p upward
211
+ Non-Adjacent stackings ------------------------------------------
212
+ Number of stackings = 4
213
+ Number of adjacent stackings = 4
214
+ Number of non adjacent stackings = 0
215
+ Base-pairs ------------------------------------------------------
216
+ A1-B12 : GPN-C pairing parallel one_hbond
217
+ Residue conformations -------------------------------------------
218
+ A1 : GPN
219
+ A2 : APN
220
+ A3 : APN
221
+ A4 : CPN
222
+ A5 : TPN
223
+ A6 : CPN
224
+ B7 : G C2p_exo anti
225
+ B8 : A C2p_exo anti
226
+ B9 : G C3p_endo anti
227
+ B10 : U C3p_endo anti
228
+ B11 : U C3p_endo anti
229
+ B12 : C C3p_endo anti
230
+ Adjacent stackings ----------------------------------------------
231
+ B7-B8 : adjacent_5p upward
232
+ B8-B9 : adjacent_5p upward
233
+ B9-B10 : adjacent_5p upward
234
+ Non-Adjacent stackings ------------------------------------------
235
+ Number of stackings = 3
236
+ Number of adjacent stackings = 3
237
+ Number of non adjacent stackings = 0
238
+ Base-pairs ------------------------------------------------------
239
+ A1-B12 : GPN-C pairing parallel one_hbond