Original dataset

#2
by duongdqq - opened

Can I please have the original dataset chestx used?
And also the image path or image id so that I can refer to original dataset

Brachio Lab org

The pathologies are taken from the NIH Google Dataset, which we downloaded from torchxrayvision: https://github.com/mlmed/torchxrayvision

The structure segmentations were generated using torchxrayvision's segmenters.

Thank you for your response. The chestx does not provide image name or image id. Do you know how can I get it

Brachio Lab org

Unfortunately, it appears that I have misplaced my code that interacts with the NIH-Google dataset. However! Perhaps this may be helpful:
https://github.com/mlmed/torchxrayvision/blob/5a8984ceb3edff04c50200e82499f9b3da4da69b/torchxrayvision/datasets.py#L720

Hopefully, our source code for the labels and such will also be helpful:
https://github.com/BrachioLab/exlib/blob/f415d53a4ee4521a362d023bd8eca3b3eb2fcc9b/src/exlib/datasets/chestx.py#L22

Thank you so much. I got the mapping

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