## File description for: Mesculenta_305_v6_PROseq_ISM_LOG2FC.txt.gz ## Intergenic enhancer regions based on Lozano et al. 2021 (https://pubmed.ncbi.nlm.nih.gov/34499719/) ## Genome version: Manihot esculenta reference genome v6.1 from Phytozome ## CHR: Chromosome ## POS: Physical position (bp) ## REF: Reference allele ## ALT: Alternative allele ## LOG2FC: Log fold change in Intergenic enhancer probability (log2(p_mutated_sequence / p_original_sequence)) ## File description for: Mesculenta_v6_GeneExpression_ISM_LOG2FC.txt.gz ## Gene expression prediction based on: Wilson et al. 2016 (https://pubmed.ncbi.nlm.nih.gov/28116755/) ## Genome version: Manihot esculenta reference genome v6 from Ensembl 56 ## CHR: Chromosome ## POS: Physical position (bp) ## REF: Reference allele ## ALT: Alternative allele ## GENE: Gene ID ## STRAND: Gene strand ## TISSUE: Tissue type (Acronyms detailed in Figure 1 of Wilson et al.) ## LOG2FC: Gene expression log fold change (log2(gene_exp_mutated_sequence / gene_exp_original_sequence))