public String generateNaturalAnalogSequencePeptide ( String notation ) throws HELM2HandledException , ValidationException , MonomerLoadingException , PeptideUtilsException , org . helm . notation2 . parser . exceptionparser . NotationException , ChemistryException { String result = SequenceConverter . getPeptideNaturalAnalogSequenceFromNotation ( validate ( notation ) ) ; setMonomerFactoryToDefault ( notation ) ; return result ; }
method to generate the natural analogue sequence for all peptide - sequences from an HELM input