private ProtoNetwork failProteinFamilies ( final ProtoNetwork pn , final StringBuilder bldr , String pfLocation , String errorMessage ) { bldr . append ( "PROTEIN FAMILY RESOLUTION FAILURE in " ) ; bldr . append ( pfLocation ) ; bldr . append ( "\n\treason: " ) ; bldr . append ( errorMessage ) ; stageWarning ( bldr . toString ( ) ) ; // could not resolve protein family resource so return original // proto network. return pn ; }
Logic to recover from a failed protein family document .