private ProtoNetwork failGeneScaffolding ( final ProtoNetwork pn , final StringBuilder bldr , String gsLocation , String errorMessage ) { bldr . append ( "GENE SCAFFOLDING RESOURCE RESOLUTION FAILURE in " ) ; bldr . append ( gsLocation ) ; bldr . append ( "\n\treason: " ) ; bldr . append ( errorMessage ) ; stageWarning ( bldr . toString ( ) ) ; // could not resolve gene scaffolding resource so return original // proto network. return pn ; }
Logic to recover from a failure to resolve the gene scaffolding resource .