public static AffineGapAlignmentScoring < NucleotideSequence > getNucleotideBLASTScoring ( int gapOpenPenalty , int gapExtensionPenalty ) { return new AffineGapAlignmentScoring <> ( NucleotideSequence . ALPHABET , 5 , - 4 , gapOpenPenalty , gapExtensionPenalty ) ; }
Returns Nucleotide BLAST scoring