pattern_name: abnormalDegenerationOfCellularComponentInLocation
pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormalDegenerationOfCellularComponentInLocation.yaml
description: "Deterioration or loss of function of a cellular component that was once present in a location, such as HP_0007305 CNS demyelination."

classes:
  degenerate: PATO:0000639
  abnormal: PATO:0000460
  cellular component: GO:0005575
  independent continuant: BFO:0000004

relations:
  inheres_in: RO:0000052
  has_modifier: RO:0002573
  has_part: BFO:0000051
  part_of: BFO:0000050

annotationProperties:
  exact_synonym: oio:hasExactSynonym

vars:
  cellular_component: "'cellular component'"
  location: "'independent continuant'"

name:
  text: "%s degeneration in %s"
  vars:
  - cellular_component
  - location

annotations:
- annotationProperty: exact_synonym
  text: "degeneration of the %s in %s"
  vars:
  - cellular_component
  - location

def:
  text: "Partial or complete degeneration of %s tissue in the %s that was once present."
  vars:
  - cellular_component
  - location

equivalentTo:
  text: "'has_part' some ('degenerate' and ('inheres_in' some (%s and ('part_of' some %s))) and ('has_modifier' some 'abnormal'))"
  vars:
  - cellular_component
  - location
contributors:
- https://orcid.org/0000-0002-3528-5267
