---
pattern_name: abnormalThicknessOfAnatomicalEntity

pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormalThicknessOfAnatomicalEntity.yaml

description: 'Use this phenotype pattern when an anatomical entity displays
  abnormal thickness.'

#  examples:
#    - http://purl.obolibrary.org/obo/HP_0011486  # Abnormality of corneal thickness
#    - http://purl.obolibrary.org/obo/MP_0011961  # abnormal cornea thickness
#    - http://purl.obolibrary.org/obo/MP_0020135  # abnormal heart ventricle wall thickness

contributors:
  - https://orcid.org/0000-0001-8314-2140  # Ray Stefancsik
  - https://orcid.org/0000-0001-5208-3432  # Nicole Vasilevsky
  - https://orcid.org/0000-0002-3528-5267  # Sofia Robb
  - https://orcid.org/0000-0002-6490-7723  # Anna V. Anagnostopoulos
  - https://orcid.org/0000-0002-7356-1779  # Nicolas Matentzoglu
  - https://orcid.org/0000-0003-4606-0597  # Susan Bello

classes:
  thickness: PATO:0000915
  abnormal: PATO:0000460
  anatomical_entity: UBERON:0001062

relations:
  characteristic_of: RO:0000052
  has_modifier: RO:0002573
  has_part: BFO:0000051

annotationProperties:
  exact_synonym: oio:hasExactSynonym

vars:
  anatomical_entity: "'anatomical_entity'"

name:
  text: "abnormal %s thickness"
  vars:
    - anatomical_entity

annotations:
  - annotationProperty: exact_synonym
    text: "%s thickness abnormality"
    vars:
      - anatomical_entity

def:
  text: "Abnormal thickness of %s in a dimension that is perpendicular to its
    length or width."
  vars:
    - anatomical_entity

equivalentTo:
  text: "'has_part' some (
    'thickness' and
    ('characteristic_of' some %s) and
    ('has_modifier' some 'abnormal')
    )"
  vars:
    - anatomical_entity
...
