pattern_name: prematureClosureOfAnatomicalEntity

pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/prematureClosureOfAnatomicalEntity.yaml

description: 'Use this phenotype pattern in cases of premature closure of anatomical entity, e.g. premature cranial suture closure. Please, note that there may be more specific patterns for cranial suture closure phenotypes if a suitable GO biological process term becomes available.'

#  examples:
#    - http://purl.obolibrary.org/obo/HP_0004440  # Coronal craniosynostosis
#    - http://purl.obolibrary.org/obo/MP_0030350  # premature coronal suture closure
#    - http://purl.obolibrary.org/obo/MP_0000081  # premature cranial suture closure

contributors:
  - https://orcid.org/0000-0001-8314-2140  # Ray Stefancsik
  - https://orcid.org/0000-0002-7073-9172  # David Osumi-Sutherland
  - https://orcid.org/0000-0003-4606-0597  # Susan Bello
  - https://orcid.org/0000-0002-9900-7880  # Yvonne M. Bradford

classes:
  premature_closure: PATO:0002166
  abnormal: PATO:0000460
  anatomical_entity: UBERON:0001062

relations:
  characteristic_of: RO:0000052
  has_modifier: RO:0002573
  has_part: BFO:0000051

annotationProperties:
  exact_synonym: oio:hasExactSynonym

vars:
  anatomical_entity: "'anatomical_entity'"

name:
  text: "premature %s closure"
  vars:
    - anatomical_entity

annotations:
  - annotationProperty: exact_synonym
    text: "premature closure of %s"
    vars:
      - anatomical_entity

def:
  text: "Premature closure of %s."
  vars:
    - anatomical_entity

equivalentTo:
  text: "'has_part' some (
        'premature_closure' and
        'characteristic_of' some %s and
        'has_modifier' some 'abnormal')"
  vars:
    - anatomical_entity
