---
pattern_name: exsertedAnatomicalEntity

pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/exsertedAnatomicalEntity.yaml

description: 'Use this phenotype pattern when an anatomical entity is
  abnormally protruding or projecting from the body. These anatomical
  entities may be described as being prolapsed, protuberant or sticking out.'

#  examples:
#    - http://purl.obolibrary.org/obo/ZP_0016742  # pectoral fin exserted, abnormal
#    - http://purl.obolibrary.org/obo/HP_0002035  # Rectal prolapse
#    - http://purl.obolibrary.org/obo/MP_0000493  # rectal prolapse

contributors:
  - https://orcid.org/0000-0001-8314-2140  # Ray Stefancsik
  - https://orcid.org/0000-0002-7356-1779  # Nicolas Matentzoglu
  - https://orcid.org/0000-0003-4606-0597  # Susan Bello
  - https://orcid.org/0000-0002-6490-7723  # Anna V. Anagnostopoulos

classes:
  exserted: PATO:0000623
  abnormal: PATO:0000460
  anatomical_entity: UBERON:0001062

relations:
  characteristic_of: RO:0000052
  has_modifier: RO:0002573
  has_part: BFO:0000051

annotationProperties:
  exact_synonym: oio:hasExactSynonym
  narrow_synonym: oio:hasNarrowSynonym

vars:
  anatomical_entity: "'anatomical_entity'"

name:
  text: "exserted %s"
  vars:
    - anatomical_entity

annotations:
  - annotationProperty: exact_synonym
    text: "protuberant %s"
    vars:
      - anatomical_entity

  - annotationProperty: narrow_synonym
    text: "%s prolapse"
    vars:
      - anatomical_entity

  - annotationProperty: narrow_synonym
    text: "prolapsed %s"
    vars:
      - anatomical_entity

def:
  text: "An exserted %s is protruding or projecting from the body abnormally."
  vars:
    - anatomical_entity

equivalentTo:
  text: "'has_part' some (
    'exserted' and
    ('characteristic_of' some %s) and
    ('has_modifier' some 'abnormal')
    )"
  vars:
    - anatomical_entity
...
