pattern_name: abnormallyApoptoticAnatomicalEntity
pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormallyApoptoticAnatomicalEntity.yaml
description: "The abnormal presence of programmed cell death (apoptosis), consisting of blebbing of the nucleus and DNA fragmentation, in an anatomical entity."

contributors:
- https://orcid.org/0000-0002-7356-1779
- https://orcid.org/0000-0002-9900-7880
- https://orcid.org/0000-0002-9611-1279

classes:
  abnormal: PATO:0000460
  anatomical entity: UBERON:0001062
  apoptotic: PATO:0000638

relations:
  inheres_in: RO:0000052
  has_modifier: RO:0002573
  has_part: BFO:0000051

annotationProperties:
  exact_synonym: oio:hasExactSynonym

vars:
  anatomical_entity: "'anatomical entity'"

name:
  text: "abnormally apoptotic %s"
  vars:
  - anatomical_entity

def:
  text: "An abnormally apoptotic %s."
  vars:
  - anatomical_entity

annotations:
- annotationProperty: exact_synonym
  text: "%s with apoptosis"
  vars:
  - anatomical_entity

equivalentTo:
  text: "'has_part' some ('apoptotic' and ('inheres_in' some %s) and ('has_modifier' some 'abnormal'))"
  vars:
  - anatomical_entity
