pattern_name: abnormalAgenesisOfAnatomicalEntity
pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormalAgenesisOfAnatomicalEntity.yaml
description: "Abnormal absence of a tissue or organ due to failure to develop. Agenesis is a specific process to describe the failure of a tissue to develop, such as HP_0001341 Olfactory lobe agenesis. It is more specific than an absent anatomical entity."

contributors:
  - https://orcid.org/0000-0001-5208-3432
  
classes:
  agenesis: PATO:0002291
  abnormal: PATO:0000460
  anatomical entity: UBERON:0001062

relations: 
  inheres_in: RO:0000052
  has_modifier: RO:0002573
  has_part: BFO:0000051

annotationProperties:
  exact_synonym: oio:hasExactSynonym

vars:
  anatomical_entity: "'anatomical entity'"

name:
  text: "agenesis of %s"
  vars:
   - anatomical_entity

def:
  text: "Agenesis of %s."
  vars:
    - anatomical_entity

equivalentTo:
  text: "'has_part' some ('agenesis' and ('inheres_in' some %s) and ('has_modifier' some 'abnormal'))"
  vars:
    - anatomical_entity
