pattern_name: abnormalFunctionalityOfPartOfAnatomicalEntity
pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormalFunctionalityOfPartOfAnatomicalEntity.yaml
description: "Dysfunction of a part of an anatomical entity, such as HP_0007905 'Abnormal iris vasculature'."

contributors:
  - https://orcid.org/0000-0001-5208-3432
  
classes:
  functionality: PATO:0001509
  abnormal: PATO:0000460
  anatomical entity: UBERON:0001062

relations: 
  inheres_in_part_of: RO:0002314
  has_modifier: RO:0002573
  has_part: BFO:0000051

annotationProperties:
  exact_synonym: oio:hasExactSynonym 

vars:
  anatomical_entity: "'anatomical entity'"

name:
  text: "abnormality of %s physiology"
  vars:
   - anatomical_entity

def:
  text: "Any functional anomaly of the %s."
  vars:
    - anatomical_entity

equivalentTo:
  text: "'has_part' some ('functionality' and ('inheres_in_part_of' some %s) and ('has_modifier' some 'abnormal'))"
  vars:
    - anatomical_entity
