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- README.md +27 -0
- test/data.mdb +0 -0
- test/lock.mdb +0 -0
- train/data.mdb +3 -0
- train/lock.mdb +0 -0
- valid/data.mdb +0 -0
- valid/lock.mdb +0 -0
.gitattributes
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README.md
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---
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license: mit
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---
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---
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license: mit
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---
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# Description
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β-Lactamase Prediction studies the activity among first-order mutants of the TEM-1 beta-lactamase protein. The target *y* ∈ *R* is the experimentally tested fitness score which records the scaled mutation effect for each mutant.
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# Splits
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**Structure type:** None
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The dataset is from [**PEER: A Comprehensive and Multi-Task Benchmark for Protein Sequence Understanding**](https://arxiv.org/abs/2206.02096). We follow the original data splits, with the number of training, validation and test set shown below:
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- Train: 4158
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- Valid: 520
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- Test: 520
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# Data format
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We organize all data in LMDB format. The architecture of the databse is like:
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**length:** The number of samples
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**0:**
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- **seq:** The structure-aware sequence
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- **fitness:** fitness label of the sequence
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**1:**
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**···**
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test/data.mdb
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Binary file (508 kB). View file
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test/lock.mdb
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Binary file (8.19 kB). View file
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train/data.mdb
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version https://git-lfs.github.com/spec/v1
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oid sha256:b1243c0b5b737dfc653ed533bdb948dc3fdf8a48d8d106dc37887993baf493cb
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size 3989504
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train/lock.mdb
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Binary file (8.19 kB). View file
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valid/data.mdb
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Binary file (508 kB). View file
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valid/lock.mdb
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Binary file (8.19 kB). View file
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