We present an LDA approach to entity disambiguation. Each topic is associated with a Wikipedia article and topics generate either content words or entity mentions. Training such models is challenging because of the topic and vocabulary size, both in the millions. We tackle these problems using a novel distributed inference and representation framework based on a parallel Gibbs sampler guided by the Wikipedia link graph, and pipelines of MapReduce allowing fast and memoryfrugal processing of large datasets. We report state-of-the-art performance on a public dataset.
A few topic model-inspired approaches have been proposed for modeling entities @cite_27 @cite_14 @cite_4 . Early work @cite_27 presents extensions to LDA to model both words and entities; however, they treat entities as , not linked to a knowledge base. @cite_14 @cite_4 model a document as a collection of topic mentions, materializing as words or phrases, with topics being identified with Wikipedia articles. Kataria in particular investigate the use of the Wikipedia category graph as the topology of a hierarchical topic model. The main drawback of this proposal is its scalability both in terms of efficiency and topic coverage; they prune Wikipedia to a subset of approximately 60k entities, reporting training times of 2.6 days. Han & Sun carried out the largest experiment of this kind, training on 3M Wikipedia documents (and no graph), reporting training times of one week with a memory footprint of 20GB on one machine. Our goal is to provide full Wikipedia coverage and high annotation accuracy with reasonable training processing efficiency.
@cite_27 @cite_14 @cite_4
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Disambiguating entity references by annotating them with unique ids from a catalog is a critical step in the enrichment of unstructured content. In this paper, we show that topic models, such as Latent Dirichlet Allocation (LDA) and its hierarchical variants, form a natural class of models for learning accurate entity disambiguation models from crowd-sourced knowledge bases such as Wikipedia. Our main contribution is a semi-supervised hierarchical model called Wikipedia-based Pachinko Allocation Model (WPAM) that exploits: (1) All words in the Wikipedia corpus to learn word-entity associations (unlike existing approaches that only use words in a small fixed window around annotated entity references in Wikipedia pages), (2) Wikipedia annotations to appropriately bias the assignment of entity labels to annotated (and co-occurring unannotated) words during model learning, and (3) Wikipedia's category hierarchy to capture co-occurrence patterns among entities. We also propose a scheme for pruning spurious nodes from Wikipedia's crowd-sourced category hierarchy. In our experiments with multiple real-life datasets, we show that WPAM outperforms state-of-the-art baselines by as much as 16 in terms of disambiguation accuracy. Topic models, such as Latent Dirichlet Allocation (LDA), posit that documents are drawn from admixtures of distributions over words, known as topics. The inference problem of recovering topics from admixtures, is NP-hard. Assuming separability, a strong assumption, [4] gave the first provable algorithm for inference. For LDA model, [6] gave a provable algorithm using tensor-methods. But [4,6] do not learn topic vectors with bounded @math error (a natural measure for probability vectors). Our aim is to develop a model which makes intuitive and empirically supported assumptions and to design an algorithm with natural, simple components such as SVD, which provably solves the inference problem for the model with bounded @math error. A topic in LDA and other models is essentially characterized by a group of co-occurring words. Motivated by this, we introduce topic specific Catchwords, group of words which occur with strictly greater frequency in a topic than any other topic individually and are required to have high frequency together rather than individually. A major contribution of the paper is to show that under this more realistic assumption, which is empirically verified on real corpora, a singular value decomposition (SVD) based algorithm with a crucial pre-processing step of thresholding, can provably recover the topics from a collection of documents drawn from Dominant admixtures. Dominant admixtures are convex combination of distributions in which one distribution has a significantly higher contribution than others. Apart from the simplicity of the algorithm, the sample complexity has near optimal dependence on @math , the lowest probability that a topic is dominant, and is better than [4]. Empirical evidence shows that on several real world corpora, both Catchwords and Dominant admixture assumptions hold and the proposed algorithm substantially outperforms the state of the art [5]. Topic modeling has been widely used to mine topics from documents. However, a key weakness of topic modeling is that it needs a large amount of data (e.g., thousands of documents) to provide reliable statistics to generate coherent topics. However, in practice, many document collections do not have so many documents. Given a small number of documents, the classic topic model LDA generates very poor topics. Even with a large volume of data, unsupervised learning of topic models can still produce unsatisfactory results. In recently years, knowledge-based topic models have been proposed, which ask human users to provide some prior domain knowledge to guide the model to produce better topics. Our research takes a radically different approach. We propose to learn as humans do, i.e., retaining the results learned in the past and using them to help future learning. When faced with a new task, we first mine some reliable (prior) knowledge from the past learning modeling results and then use it to guide the model inference to generate more coherent topics. This approach is possible because of the big data readily available on the Web. The proposed algorithm mines two forms of knowledge: must-link (meaning that two words should be in the same topic) and cannot-link (meaning that two words should not be in the same topic). It also deals with two problems of the automatically mined knowledge, i.e., wrong knowledge and knowledge transitivity. Experimental results using review documents from 100 product domains show that the proposed approach makes dramatic improvements over state-of-the-art baselines. In this work, we address the problem of joint modeling of text and citations in the topic modeling framework. We present two different models called the Pairwise-Link-LDA and the Link-PLSA-LDA models. The Pairwise-Link-LDA model combines the ideas of LDA [4] and Mixed Membership Block Stochastic Models [1] and allows modeling arbitrary link structure. However, the model is computationally expensive, since it involves modeling the presence or absence of a citation (link) between every pair of documents. The second model solves this problem by assuming that the link structure is a bipartite graph. As the name indicates, Link-PLSA-LDA model combines the LDA and PLSA models into a single graphical model. Our experiments on a subset of Citeseer data show that both these models are able to predict unseen data better than the baseline model of Erosheva and Lafferty [8], by capturing the notion of topical similarity between the contents of the cited and citing documents. Our experiments on two different data sets on the link prediction task show that the Link-PLSA-LDA model performs the best on the citation prediction task, while also remaining highly scalable. In addition, we also present some interesting visualizations generated by each of the models. Continuous space word embeddings learned from large, unstructured corpora have been shown to be effective at capturing semantic regularities in language. In this paper we replace LDA’s parameterization of “topics” as categorical distributions over opaque word types with multivariate Gaussian distributions on the embedding space. This encourages the model to group words that are a priori known to be semantically related into topics. To perform inference, we introduce a fast collapsed Gibbs sampling algorithm based on Cholesky decompositions of covariance matrices of the posterior predictive distributions. We further derive a scalable algorithm that draws samples from stale posterior predictive distributions and corrects them with a Metropolis–Hastings step. Using vectors learned from a domain-general corpus (English Wikipedia), we report results on two document collections (20-newsgroups and NIPS). Qualitatively, Gaussian LDA infers different (but still very sensible) topics relative to standard LDA. Quantitatively, our technique outperforms existing models at dealing with OOV words in held-out documents. The past year alone has seen unprecedented leaps in the area of learning-based image translation, namely Cycle-GAN, by But experiments so far have been tailored to merely two domains at a time, and scaling them to more would require an quadratic number of models to be trained. And with two-domain models taking days to train on current hardware, the number of domains quickly becomes limited by the time and resources required to process them. In this paper, we propose a multi-component image translation model and training scheme which scales linearly - both in resource consumption and time required - with the number of domains. We demonstrate its capabilities on a dataset of paintings by 14 different artists and on images of the four different seasons in the Alps. Note that 14 data groups would need (14 choose 2) = 91 different CycleGAN models: a total of 182 generator discriminator pairs; whereas our model requires only 14 generator discriminator pairs. The problem of topic modeling can be seen as a generalization of the clustering problem, in that it posits that observations are generated due to multiple latent factors (e.g., the words in each document are generated as a mixture of several active topics, as opposed to just one). This increased representational power comes at the cost of a more challenging unsupervised learning problem of estimating the topic probability vectors (the distributions over words for each topic), when only the words are observed and the corresponding topics are hidden. We provide a simple and efficient learning procedure that is guaranteed to recover the parameters for a wide class of mixture models, including the popular latent Dirichlet allocation (LDA) model. For LDA, the procedure correctly recovers both the topic probability vectors and the prior over the topics, using only trigram statistics (i.e., third order moments, which may be estimated with documents containing just three words). The method, termed Excess Correlation Analysis (ECA), is based on a spectral decomposition of low order moments (third and fourth order) via two singular value decompositions (SVDs). Moreover, the algorithm is scalable since the SVD operations are carried out on @math matrices, where @math is the number of latent factors (e.g. the number of topics), rather than in the @math -dimensional observed space (typically @math ). Many data sets contain rich information about objects, as well as pairwise relations between them. For instance, in networks of websites, scientific papers, and other documents, each node has content consisting of a collection of words, as well as hyperlinks or citations to other nodes. In order to perform inference on such data sets, and make predictions and recommendations, it is useful to have models that are able to capture the processes which generate the text at each node and the links between them. In this paper, we combine classic ideas in topic modeling with a variant of the mixed-membership block model recently developed in the statistical physics community. The resulting model has the advantage that its parameters, including the mixture of topics of each document and the resulting overlapping communities, can be inferred with a simple and scalable expectation-maximization algorithm. We test our model on three data sets, performing unsupervised topic classification and link prediction. For both tasks, our model outperforms several existing state-of-the-art methods, achieving higher accuracy with significantly less computation, analyzing a data set with 1.3 million words and 44 thousand links in a few minutes. Algorithms such as Latent Dirichlet Allocation (LDA) have achieved significant progress in modeling word document relationships. These algorithms assume each word in the document was generated by a hidden topic and explicitly model the word distribution of each topic as well as the prior distribution over topics in the document. Given these parameters, the topics of all words in the same document are assumed to be independent. In this paper, we propose modeling the topics of words in the document as a Markov chain. Specifically, we assume that all words in the same sentence have the same topic, and successive sentences are more likely to have the same topics. Since the topics are hidden, this leads to using the well-known tools of Hidden Markov Models for learning and inference. We show that incorporating this dependency allows us to learn better topics and to disambiguate words that can belong to different topics. Quantitatively, we show that we obtain better perplexity in modeling documents with only a modest increase in learning and inference complexity. Topic modeling has been widely used for analyzing text document collections. Recently, there have been significant advancements in various topic modeling techniques, particularly in the form of probabilistic graphical modeling. State-of-the-art techniques such as Latent Dirichlet Allocation (LDA) have been successfully applied in visual text analytics. However, most of the widely-used methods based on probabilistic modeling have drawbacks in terms of consistency from multiple runs and empirical convergence. Furthermore, due to the complicatedness in the formulation and the algorithm, LDA cannot easily incorporate various types of user feedback. To tackle this problem, we propose a reliable and flexible visual analytics system for topic modeling called UTOPIAN (User-driven Topic modeling based on Interactive Nonnegative Matrix Factorization). Centered around its semi-supervised formulation, UTOPIAN enables users to interact with the topic modeling method and steer the result in a user-driven manner. We demonstrate the capability of UTOPIAN via several usage scenarios with real-world document corpuses such as InfoVis VAST paper data set and product review data sets. This paper presents online topic model (OLDA), a topic model that automatically captures the thematic patterns and identifies emerging topics of text streams and their changes over time. Our approach allows the topic modeling framework, specifically the latent Dirichlet allocation (LDA) model, to work in an online fashion such that it incrementally builds an up-to-date model (mixture of topics per document and mixture of words per topic) when a new document (or a set of documents) appears. A solution based on the empirical Bayes method is proposed. The idea is to incrementally update the current model according to the information inferred from the new stream of data with no need to access previous data. The dynamics of the proposed approach also provide an efficient mean to track the topics over time and detect the emerging topics in real time. Our method is evaluated both qualitatively and quantitatively using benchmark datasets. In our experiments, the OLDA has discovered interesting patterns by just analyzing a fraction of data at a time. Our tests also prove the ability of OLDA to align the topics across the epochs with which the evolution of the topics over time is captured. The OLDA is also comparable to, and sometimes better than, the original LDA in predicting the likelihood of unseen documents. Cross-document coreference, the problem of resolving entity mentions across multi-document collections, is crucial to automated knowledge base construction and data mining tasks. However, the scarcity of large labeled data sets has hindered supervised machine learning research for this task. In this paper we develop and demonstrate an approach based on distantly-labeling'' a data set from which we can train a discriminative cross-document coreference model. In particular we build a dataset of more than a million people mentions extracted from 3.5 years of New York Times articles, leverage Wikipedia for distant labeling with a generative model (and measure the reliability of such labeling); then we train and evaluate a conditional random field coreference model that has factors on cross-document entities as well as mention-pairs. This coreference model obtains high accuracy in resolving mentions and entities that are not present in the training data, indicating applicability to non-Wikipedia data. Given the large amount of data, our work is also an exercise demonstrating the scalability of our approach. Topic Model such as Latent Dirichlet Allocation(LDA) makes assumption that topic assignment of different words are conditionally independent. In this paper, we propose a new model Extended Global Topic Random Field (EGTRF) to model non-linear dependencies between words. Specifically, we parse sentences into dependency trees and represent them as a graph, and assume the topic assignment of a word is influenced by its adjacent words and distance-2 words. Word similarity information learned from large corpus is incorporated to enhance word topic assignment. Parameters are estimated efficiently by variational inference and experimental results on two datasets show EGTRF achieves lower perplexity and higher log predictive probability. Topic models, such as latent Dirichlet allocation (LDA), can be useful tools for the statistical analysis of document collections and other discrete data. The LDA model assumes that the words of each document arise from a mixture of topics, each of which is a distribution over the vocabulary. A limitation of LDA is the inability to model topic correlation even though, for example, a document about genetics is more likely to also be about disease than X-ray astronomy. This limitation stems from the use of the Dirichlet distribution to model the variability among the topic proportions. In this paper we develop the correlated topic model (CTM), where the topic proportions exhibit correlation via the logistic normal distribution [J. Roy. Statist. Soc. Ser. B 44 (1982) 139--177]. We derive a fast variational inference algorithm for approximate posterior inference in this model, which is complicated by the fact that the logistic normal is not conjugate to the multinomial. We apply the CTM to the articles from Science published from 1990--1999, a data set that comprises 57M words. The CTM gives a better fit of the data than LDA, and we demonstrate its use as an exploratory tool of large document collections. Topic models provide a powerful tool for analyzing large text collections by representing high dimensional data in a low dimensional subspace. Fitting a topic model given a set of training documents requires approximate inference techniques that are computationally expensive. With today's large-scale, constantly expanding document collections, it is useful to be able to infer topic distributions for new documents without retraining the model. In this paper, we empirically evaluate the performance of several methods for topic inference in previously unseen documents, including methods based on Gibbs sampling, variational inference, and a new method inspired by text classification. The classification-based inference method produces results similar to iterative inference methods, but requires only a single matrix multiplication. In addition to these inference methods, we present SparseLDA, an algorithm and data structure for evaluating Gibbs sampling distributions. Empirical results indicate that SparseLDA can be approximately 20 times faster than traditional LDA and provide twice the speedup of previously published fast sampling methods, while also using substantially less memory. This paper presents an LDA-style topic model that captures not only the low-dimensional structure of data, but also how the structure changes over time. Unlike other recent work that relies on Markov assumptions or discretization of time, here each topic is associated with a continuous distribution over timestamps, and for each generated document, the mixture distribution over topics is influenced by both word co-occurrences and the document's timestamp. Thus, the meaning of a particular topic can be relied upon as constant, but the topics' occurrence and correlations change significantly over time. We present results on nine months of personal email, 17 years of NIPS research papers and over 200 years of presidential state-of-the-union addresses, showing improved topics, better timestamp prediction, and interpretable trends. Search algorithms incorporating some form of topic model have a long history in information retrieval. For example, cluster-based retrieval has been studied since the 60s and has recently produced good results in the language model framework. An approach to building topic models based on a formal generative model of documents, Latent Dirichlet Allocation (LDA), is heavily cited in the machine learning literature, but its feasibility and effectiveness in information retrieval is mostly unknown. In this paper, we study how to efficiently use LDA to improve ad-hoc retrieval. We propose an LDA-based document model within the language modeling framework, and evaluate it on several TREC collections. Gibbs sampling is employed to conduct approximate inference in LDA and the computational complexity is analyzed. We show that improvements over retrieval using cluster-based models can be obtained with reasonable efficiency. It is difficult to apply machine learning to new domains because often we lack labeled problem instances. In this paper, we provide a solution to this problem that leverages domain knowledge in the form of affinities between input features and classes. For example, in a baseball vs. hockey text classification problem, even without any labeled data, we know that the presence of the word puck is a strong indicator of hockey. We refer to this type of domain knowledge as a labeled feature. In this paper, we propose a method for training discriminative probabilistic models with labeled features and unlabeled instances. Unlike previous approaches that use labeled features to create labeled pseudo-instances, we use labeled features directly to constrain the model's predictions on unlabeled instances. We express these soft constraints using generalized expectation (GE) criteria --- terms in a parameter estimation objective function that express preferences on values of a model expectation. In this paper we train multinomial logistic regression models using GE criteria, but the method we develop is applicable to other discriminative probabilistic models. The complete objective function also includes a Gaussian prior on parameters, which encourages generalization by spreading parameter weight to unlabeled features. Experimental results on text classification data sets show that this method outperforms heuristic approaches to training classifiers with labeled features. Experiments with human annotators show that it is more beneficial to spend limited annotation time labeling features rather than labeling instances. For example, after only one minute of labeling features, we can achieve 80 accuracy on the ibm vs. mac text classification problem using GE-FL, whereas ten minutes labeling documents results in an accuracy of only 77 We automatically create enormous, free and multilingual silver-standard training annotations for named entity recognition (ner) by exploiting the text and structure of Wikipedia. Most ner systems rely on statistical models of annotated data to identify and classify names of people, locations and organisations in text. This dependence on expensive annotation is the knowledge bottleneck our work overcomes. We first classify each Wikipedia article into named entity (ne) types, training and evaluating on 7200 manually-labelled Wikipedia articles across nine languages. Our cross-lingual approach achieves up to 95 accuracy. We transform the links between articles into ne annotations by projecting the target [email protected]?s classifications onto the anchor text. This approach yields reasonable annotations, but does not immediately compete with existing gold-standard data. By inferring additional links and heuristically tweaking the Wikipedia corpora, we better align our automatic annotations to gold standards. We annotate millions of words in nine languages, evaluating English, German, Spanish, Dutch and Russian Wikipedia-trained models against conll shared task data and other gold-standard corpora. Our approach outperforms other approaches to automatic ne annotation (Richman and Schone, 2008 [61], , 2008 [46]) competes with gold-standard training when tested on an evaluation corpus from a different source; and performs 10 better than newswire-trained models on manually-annotated Wikipedia text. Objective Build probabilistic topic model representations of hospital admissions processes and compare the ability of such models to predict clinical order patterns as compared to preconstructed order sets. @PARASPLIT Materials and Methods The authors evaluated the first 24 hours of structured electronic health record data for > 10 K inpatients. Drawing an analogy between structured items (e.g., clinical orders) to words in a text document, the authors performed latent Dirichlet allocation probabilistic topic modeling. These topic models use initial clinical information to predict clinical orders for a separate validation set of > 4 K patients. The authors evaluated these topic model-based predictions vs existing human-authored order sets by area under the receiver operating characteristic curve, precision, and recall for subsequent clinical orders. @PARASPLIT Results Existing order sets predict clinical orders used within 24 hours with area under the receiver operating characteristic curve 0.81, precision 16 , and recall 35 . This can be improved to 0.90, 24 , and 47 ( P < 10−20) by using probabilistic topic models to summarize clinical data into up to 32 topics. Many of these latent topics yield natural clinical interpretations (e.g., “critical care,” “pneumonia,” “neurologic evaluation”). @PARASPLIT Discussion Existing order sets tend to provide nonspecific, process-oriented aid, with usability limitations impairing more precise, patient-focused support. Algorithmic summarization has the potential to breach this usability barrier by automatically inferring patient context, but with potential tradeoffs in interpretability. @PARASPLIT Conclusion Probabilistic topic modeling provides an automated approach to detect thematic trends in patient care and generate decision support content. A potential use case finds related clinical orders for decision support.