Several techniques for visualization of dynamic graphs are based on different spatial arrangements of a temporal sequence of node-link diagrams. Many studies in the literature have investigated the importance of maintaining the user's mental map across this temporal sequence, but usually each layout is considered as a static graph drawing and the effect of user interaction is disregarded. We conducted a task-based controlled experiment to assess the effectiveness of two basic interaction techniques: the adjustment of the layout stability and the highlighting of adjacent nodes and edges. We found that generally both interaction techniques increase accuracy, sometimes at the cost of longer completion times, and that the highlighting outclasses the stability adjustment for many tasks except the most complex ones.
A profound understanding of analytical tasks is a necessary prerequisite to design novel visualization techniques as well as evaluate existing ones. @cite_33 propose a task taxonomy for dynamic graphs along three different axes: graph entities, temporal features, and properties (structural and domain-specific). According to @cite_14 , each task can be understood as a question containing references to two dimensions and requiring an answer in the third one. In this way, they distinguish between topological tasks, temporal tasks, and behavioural tasks. Archambault and Purchase @cite_7 structure their taxonomy along two dimension, mostly aiming at assessing the importance of the mental map. They distinguish between local and global tasks, and between distinguishable and undistinguishable tasks (depending on whether graph entities need to be distinguished from each other or can be aggregated). A task taxonomy for multivariate networks can be found in @cite_11 .
@cite_14 @cite_33 @cite_7 @cite_11
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We approached the temporal relation identification tasks of TempEval 2007 as pair-wise classification tasks. We introduced a variety of syntactically and semantically motivated features, including temporal-logic-based features derived from running our Task B system on the Task A and C data. We trained support vector machine models and achieved the second highest accuracies on the tasks: 61 on Task A, 75 on Task B and 54 on Task C. Many real-world domains can be represented as large node-link graphs: backbone Internet routers connect with 70,000 other hosts, mid-sized Web servers handle between 20,000 and 200,000 hyperlinked documents, and dictionaries contain millions of words defined in terms of each other. Computational manipulation of such large graphs is common, but previous tools for graph visualization have been limited to datasets of a few thousand nodes. Visual depictions of graphs and networks are external representations that exploit human visual processing to reduce the cognitive load of many tasks that require understanding of global or local structure. We assert that the two key advantages of computer-based systems for information visualization over traditional paper-based visual exposition are interactivity and scalability. We also argue that designing visualization software by taking the characteristics of a target user's task domain into account leads to systems that are more effective and scale to larger datasets than previous work. This thesis contains a detailed analysis of three specialized systems for the interactive exploration of large graphs, relating the intended tasks to the spatial layout and visual encoding choices. We present two novel algorithms for specialized layout and drawing that use quite different visual metaphors. The H3 system for visualizing the hyperlink structures of web sites scales to datasets of over 100,000 nodes by using a carefully chosen spanning tree as the layout backbone, 3D hyperbolic geometry for a Focus+Context view, and provides a fluid interactive experience through guaranteed frame rate drawing. The Constellation system features a highly specialized 2D layout intended to spatially encode domain-specific information for computational linguists checking the plausibility of a large semantic network created from dictionaries. The Planet Multicast system for displaying the tunnel topology of the Internet's multicast backbone provides a literal 3D geographic layout of arcs on a globe to help MBone maintainers find misconfigured long-distance tunnels. Each of these three systems provides a very different view of the graph structure, and we evaluate their efficacy for the intended task. We generalize these findings in our analysis of the importance of interactivity and specialization for graph visualization systems that are effective and scalable. Visualization has proven to be a useful tool for understanding network structures. Yet the dynamic nature of social media networks requires powerful visualization techniques that go beyond static network diagrams. To provide strong temporal network visualization tools, designers need to understand what tasks the users have to accomplish. This paper describes a taxonomy of temporal network visualization tasks. We identify the 1) entities, 2) properties, and 3) temporal features, which were extracted by surveying 53 existing temporal network visualization systems. By building and examining the task taxonomy, we report which tasks are well covered by existing systems and make suggestions for designing future visualization tools. The feedback from 12 network analysts helped refine the taxonomy. Do visual tasks have a relationship, or are they unrelated? For instance, could having surface normals simplify estimating the depth of an image? Intuition answers these questions positively, implying existence of a structure among visual tasks. Knowing this structure has notable values; it is the concept underlying transfer learning and provides a principled way for identifying redundancies across tasks, e.g., to seamlessly reuse supervision among related tasks or solve many tasks in one system without piling up the complexity. We proposes a fully computational approach for modeling the structure of space of visual tasks. This is done via finding (first and higher-order) transfer learning dependencies across a dictionary of twenty six 2D, 2.5D, 3D, and semantic tasks in a latent space. The product is a computational taxonomic map for task transfer learning. We study the consequences of this structure, e.g. nontrivial emerged relationships, and exploit them to reduce the demand for labeled data. For example, we show that the total number of labeled datapoints needed for solving a set of 10 tasks can be reduced by roughly 2 3 (compared to training independently) while keeping the performance nearly the same. We provide a set of tools for computing and probing this taxonomical structure including a solver that users can employ to devise efficient supervision policies for their use cases. Identifying, tracking and understanding changes in dynamic networks are complex and cognitively demanding tasks. We present GraphDiaries, a visual interface designed to improve support for these tasks in any node-link based graph visualization system. GraphDiaries relies on animated transitions that highlight changes in the network between time steps, thus helping users identify and understand those changes. To better understand the tasks related to the exploration of dynamic networks, we first introduce a task taxonomy, that informs the design of GraphDiaries, presented afterwards. We then report on a user study, based on representative tasks identified through the taxonomy, and that compares GraphDiaries to existing techniques for temporal navigation in dynamic networks, showing that it outperforms them in terms of both task time and errors for several of these tasks. This paper presents our work in mapping the design space of techniques for temporal graph visualisation. We identify two independent dimensions upon which the techniques can be classified: graph structural encoding and temporal encoding. Based on these dimensions, we create a matrix into which we organise existing techniques. We identify gaps in this design space which may prove interesting opportunities for the development of novel techniques. We also consider additional dimensions on which further useful classification could be made. In organising the disparate existing approaches from a wide range of domains, our classification will assist those new to the research area, and designers and evaluators developing systems for temporal graph data by raising awareness of the range of possible approaches available, and highlighting possible directions for further research. Do visual tasks have a relationship, or are they unrelated? For instance, could having surface normals simplify estimating the depth of an image? Intuition answers these questions positively, implying existence of a structure among visual tasks. Knowing this structure has notable values; it is the concept underlying transfer learning and provides a principled way for identifying redundancies across tasks, e.g., to seamlessly reuse supervision among related tasks or solve many tasks in one system without piling up the complexity. We proposes a fully computational approach for modeling the structure of space of visual tasks. This is done via finding (first and higher-order) transfer learning dependencies across a dictionary of twenty six 2D, 2.5D, 3D, and semantic tasks in a latent space. The product is a computational taxonomic map for task transfer learning. We study the consequences of this structure, e.g. nontrivial emerged relationships, and exploit them to reduce the demand for labeled data. We provide a set of tools for computing and probing this taxonomical structure including a solver users can employ to find supervision policies for their use cases. Graph-structured data arise naturally in many different application domains. By representing data as graphs, we can capture entities (i.e., nodes) as well as their relationships (i.e., edges) with each other. Many useful insights can be derived from graph-structured data as demonstrated by an ever-growing body of work focused on graph mining. However, in the real-world, graphs can be both large - with many complex patterns - and noisy which can pose a problem for effective graph mining. An effective way to deal with this issue is to incorporate "attention" into graph mining solutions. An attention mechanism allows a method to focus on task-relevant parts of the graph, helping it to make better decisions. In this work, we conduct a comprehensive and focused survey of the literature on the emerging field of graph attention models. We introduce three intuitive taxonomies to group existing work. These are based on problem setting (type of input and output), the type of attention mechanism used, and the task (e.g., graph classification, link prediction, etc.). We motivate our taxonomies through detailed examples and use each to survey competing approaches from a unique standpoint. Finally, we highlight several challenges in the area and discuss promising directions for future work. Following the success of deep convolutional networks in various vision and speech related tasks, researchers have started investigating generalizations of the well-known technique for graph-structured data. A recently-proposed method called Graph Convolutional Networks has been able to achieve state-of-the-art results in the task of node classification. However, since the proposed method relies on localized first-order approximations of spectral graph convolutions, it is unable to capture higher-order interactions between nodes in the graph. In this work, we propose a motif-based graph attention model, called Motif Convolutional Networks (MCNs), which generalizes past approaches by using weighted multi-hop motif adjacency matrices to capture higher-order neighborhoods. A novel attention mechanism is used to allow each individual node to select the most relevant neighborhood to apply its filter. Experiments show that our proposed method is able to achieve state-of-the-art results on the semi-supervised node classification task. In this article, we describe a taxonomy of generic graph related tasks along with a computer-based evaluation designed to assess the readability of two representations of graphs: matrix-based representations and node-link diagrams. This evaluation encompasses seven generic tasks and leads to insightful recommendations for the representation of graphs according to their size and density. Typically, we show that when graphs are bigger than twenty vertices, the matrix-based visualization outperforms node-link diagrams on most tasks. Only path finding is consistently in favor of node-link diagrams throughout the evaluation. Visual attributes, from simple objects (e.g., backpacks, hats) to soft-biometrics (e.g., gender, height, clothing) have proven to be a powerful representational approach for many applications such as image description and human identification. In this paper, we introduce a novel method to combine the advantages of both multi-task and curriculum learning in a visual attribute classification framework. Individual tasks are grouped based on their correlation so that two groups of strongly and weakly correlated tasks are formed. The two groups of tasks are learned in a curriculum learning setup by transferring the acquired knowledge from the strongly to the weakly correlated. The learning process within each group though, is performed in a multi-task classification setup. The proposed method learns better and converges faster than learning all the tasks in a typical multi-task learning paradigm. We demonstrate the effectiveness of our approach on the publicly available, SoBiR, VIPeR and PETA datasets and report state-of-the-art results across the board. Multi-task learning (MTL) aims to improve generalization performance by learning multiple related tasks simultaneously. While sometimes the underlying task relationship structure is known, often the structure needs to be estimated from data at hand. In this paper, we present a novel family of models for MTL, applicable to regression and classification problems, capable of learning the structure of task relationships. In particular, we consider a joint estimation problem of the task relationship structure and the individual task parameters, which is solved using alternating minimization. The task relationship structure learning component builds on recent advances in structure learning of Gaussian graphical models based on sparse estimators of the precision (inverse covariance) matrix. We illustrate the effectiveness of the proposed model on a variety of synthetic and benchmark datasets for regression and classification. We also consider the problem of combining climate model outputs for better projections of future climate, with focus on temperature in South America, and show that the proposed model outperforms several existing methods for the problem. Scientific literature with rich metadata can be represented as a labeled directed graph. This graph representation enables a number of scientific tasks such as ad hoc retrieval or named entity recognition (NER) to be formulated as typed proximity queries in the graph. One popular proximity measure is called Random Walk with Restart (RWR), and much work has been done on the supervised learning of RWR measures by associating each edge label with a parameter. In this paper, we describe a novel learnable proximity measure which instead uses one weight per edge label sequence: proximity is defined by a weighted combination of simple "path experts", each corresponding to following a particular sequence of labeled edges. Experiments on eight tasks in two subdomains of biology show that the new learning method significantly outperforms the RWR model (both trained and untrained). We also extend the method to support two additional types of experts to model intrinsic properties of entities: query-independent experts, which generalize the PageRank measure, and popular entity experts which allow rankings to be adjusted for particular entities that are especially important. Object detection, scene graph generation and region captioning, which are three scene understanding tasks at different semantic levels, are tied together: scene graphs are generated on top of objects detected in an image with their pairwise relationship predicted, while region captioning gives a language description of the objects, their attributes, relations and other context information. In this work, to leverage the mutual connections across semantic levels, we propose a novel neural network model, termed as Multi-level Scene Description Network (denoted as MSDN), to solve the three vision tasks jointly in an end-to-end manner. Object, phrase, and caption regions are first aligned with a dynamic graph based on their spatial and semantic connections. Then a feature refining structure is used to pass messages across the three levels of semantic tasks through the graph. We benchmark the learned model on three tasks, and show the joint learning across three tasks with our proposed method can bring mutual improvements over previous models. Particularly, on the scene graph generation task, our proposed method outperforms the stateof- art method with more than 3 margin. Code has been made publicly available. Multi-task learning (MTL) aims to improve generalization performance by learning multiple related tasks simultaneously. While sometimes the underlying task relationship structure is known, often the structure needs to be estimated from data at hand. In this paper, we present a novel family of models for MTL, applicable to regression and classification problems, capable of learning the structure of tasks relationship. In particular, we consider a joint estimation problem of the tasks relationship structure and the individual task parameters, which is solved using alternating minimization. The task relationship revealed by structure learning is founded on recent advances in Gaussian graphical models endowed with sparse estimators of the precision (inverse covariance) matrix. An extension to include exible Gaussian copula models that relaxes the Gaussian marginal assumption is also proposed. We illustrate the effectiveness of the proposed model on a variety of synthetic and benchmark data sets for regression and classification. We also consider the problem of combining Earth System Model (ESM) outputs for better projections of future climate, with focus on projections of temperature by combining ESMs in South and North America, and show that the proposed model outperforms several existing methods for the problem. Many popular knowledge graphs such as Freebase, YAGO or DBPedia maintain a list of non-discrete attributes for each entity. Intuitively, these attributes such as height, price or population count are able to richly characterize entities in knowledge graphs. This additional source of information may help to alleviate the inherent sparsity and incompleteness problem that are prevalent in knowledge graphs. Unfortunately, many state-of-the-art relational learning models ignore this information due to the challenging nature of dealing with non-discrete data types in the inherently binary-natured knowledge graphs. In this paper, we propose a novel multi-task neural network approach for both encoding and prediction of non-discrete attribute information in a relational setting. Specifically, we train a neural network for triplet prediction along with a separate network for attribute value regression. Via multi-task learning, we are able to learn representations of entities, relations and attributes that encode information about both tasks. Moreover, such attributes are not only central to many predictive tasks as an information source but also as a prediction target. Therefore, models that are able to encode, incorporate and predict such information in a relational learning context are highly attractive as well. We show that our approach outperforms many state-of-the-art methods for the tasks of relational triplet classification and attribute value prediction. Determining interrelatedness structure of various entities from multiple time series data is of significant interest to many areas. Knowledge of such a structure can aid in identifying cause and effect relationships, clustering of similar entities, identification of representative elements and model reduction. The majority of existing results are based on correlation based indices which effectively assume a static relationship between the time series data and are not suitable for detecting interrelatedness when the time series are dynamically related or when the time series involve loops. In this paper, a methodology for identifying the interrelatedness structure of dynamically related time series data is presented that also allows for the presence of loops in the connectivity structure. A linear dynamic graph model is presented where it is assumed that each time series data is the sum of an independent stochastic noise source and a dynamically weighted sum of other time series data. A link is assumed to be present between two time series if the weight of a time series, which is a linear time-invariant filter, is nonzero in the formation of the other. Reconstruction of the link connectivity structure under various scenarios is considered. It is shown that when the linear dynamic graph is allowed to admit non-causal weights, then the links structure can be recovered with the possibility of identifying spurious connections. However, it is shown that the spurious links remain local, where, a spurious link is restricted to be within one hop of a true link. Furthermore, strategies for exact reconstruction of the link structure when the weights are restricted to be causal are developed. The main tools for determining the network topology are based on variations of Wiener filtering. A significant insight provided by the article is that, in the class of network models considered in the paper, the Wiener filter estimating a stochastic process based on other processes remains local in the sense that the Wiener filter utilizes only measurements local to the node being estimated. Many text classification tasks are known to be highly domain-dependent. Unfortunately, the availability of training data can vary drastically across domains. Worse still, for some domains there may not be any annotated data at all. In this work, we propose a multinomial adversarial network (MAN) to tackle the text classification problem in this real-world multidomain setting (MDTC). We provide theoretical justifications for the MAN framework, proving that different instances of MANs are essentially minimizers of various f-divergence metrics (Ali and Silvey, 1966) among multiple probability distributions. MANs are thus a theoretically sound generalization of traditional adversarial networks that discriminate over two distributions. More specifically, for the MDTC task, MAN learns features that are invariant across multiple domains by resorting to its ability to reduce the divergence among the feature distributions of each domain. We present experimental results showing that MANs significantly outperform the prior art on the MDTC task. We also show that MANs achieve state-of-the-art performance for domains with no labeled data. Multi-task learning is the problem of maximizing the performance of a system across a number of related tasks. When applied to multiple domains for the same task, it is similar to domain adaptation, but symmetric, rather than limited to improving performance on a target domain. We present a more principled, better performing model for this problem, based on the use of a hierarchical Bayesian prior. Each domain has its own domain-specific parameter for each feature but, rather than a constant prior over these parameters, the model instead links them via a hierarchical Bayesian global prior. This prior encourages the features to have similar weights across domains, unless there is good evidence to the contrary. We show that the method of (Daume III, 2007), which was presented as a simple "preprocessing step," is actually equivalent, except our representation explicitly separates hyperparameters which were tied in his work. We demonstrate that allowing different values for these hyperparameters significantly improves performance over both a strong baseline and (Daume III, 2007) within both a conditional random field sequence model for named entity recognition and a discriminatively trained dependency parser. Multivariate graphs are prolific across many fields, including transportation and neuroscience. A key task in graph analysis is the exploration of connectivity, to, for example, analyze how signals flow through neurons, or to explore how well different cities are connected by flights. While standard node-link diagrams are helpful in judging connectivity, they do not scale to large networks. Adjacency matrices also do not scale to large networks and are only suitable to judge connectivity of adjacent nodes. A key approach to realize scalable graph visualization are queries: instead of displaying the whole network, only a relevant subset is shown. Query-based techniques for analyzing connectivity in graphs, however, can also easily suffer from cluttering if the query result is big enough. To remedy this, we introduce techniques that provide an overview of the connectivity and reveal details on demand. We have two main contributions: 1 two novel visualization techniques that work in concert for summarizing graph connectivity; and 2 Graffinity, an open-source implementation of these visualizations supplemented by detail views to enable a complete analysis workflow. Graffinity was designed in a close collaboration with neuroscientists and is optimized for connectomics data analysis, yet the technique is applicable across domains. We validate the connectivity overview and our open-source tool with illustrative examples using flight and connectomics data.