The automated analysis of social networks has become an important problem due to the proliferation of social networks, such as LiveJournal, Flickr and Facebook. The scale of these social networks is massive and continues to grow rapidly. An important problem in social network analysis is proximity estimation that infers the closeness of different users. Link prediction, in turn, is an important application of proximity estimation. However, many methods for computing proximity measures have high computational complexity and are thus prohibitive for large-scale link prediction problems. One way to address this problem is to estimate proximity measures via low-rank approximation. However, a single low-rank approximation may not be sufficient to represent the behavior of the entire network. In this paper, we propose Multi-Scale Link Prediction (MSLP), a framework for link prediction, which can handle massive networks. The basis idea of MSLP is to construct low rank approximations of the network at multiple scales in an efficient manner. Based on this approach, MSLP combines predictions at multiple scales to make robust and accurate predictions. Experimental results on real-life datasets with more than a million nodes show the superior performance and scalability of our method.
Very little work has been done using hierarchical structures for link prediction. One exception is the method proposed by @cite_7 , which works by sampling a number of competitive hierarchical random graphs from a large pool of such graphs. Each sampled graph is associated with a probability indicating the strength of community structure over the original network. The probability of a link appearing between any two nodes is averaged over the corresponding connecting probability on the sampled graphs. However, to predict potential links, this algorithm needs to enumerate and average over almost all possible hierarchical partitions of a given network and thus is very costly to compute even with small networks. Compared with @cite_7 , our algorithm is much more efficient in terms of speed and thus can be scaled up to large-scale link prediction problems with millions of users.
@cite_7
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Although many successful ensemble clustering approaches have been developed in recent years, there are still two limitations to most of the existing approaches. First, they mostly overlook the issue of uncertain links, which may mislead the overall consensus process. Second, they generally lack the ability to incorporate global information to refine the local links. To address these two limitations, in this paper, we propose a novel ensemble clustering approach based on sparse graph representation and probability trajectory analysis. In particular, we present the elite neighbor selection strategy to identify the uncertain links by locally adaptive thresholds and build a sparse graph with a small number of probably reliable links. We argue that a small number of probably reliable links can lead to significantly better consensus results than using all graph links regardless of their reliability. The random walk process driven by a new transition probability matrix is utilized to explore the global information in the graph. We derive a novel and dense similarity measure from the sparse graph by analyzing the probability trajectories of the random walkers, based on which two consensus functions are further proposed. Experimental results on multiple real-world datasets demonstrate the effectiveness and efficiency of our approach. In this paper we discuss a very simple approach of combining content and link information in graph structures for the purpose of community discovery, a fundamental task in network analysis. Our approach hinges on the basic intuition that many networks contain noise in the link structure and that content information can help strengthen the community signal. This enables ones to eliminate the impact of noise (false positives and false negatives), which is particularly prevalent in online social networks and Web-scale information networks. Specifically we introduce a measure of signal strength between two nodes in the network by fusing their link strength with content similarity. Link strength is estimated based on whether the link is likely (with high probability) to reside within a community. Content similarity is estimated through cosine similarity or Jaccard coefficient. We discuss a simple mechanism for fusing content and link similarity. We then present a biased edge sampling procedure which retains edges that are locally relevant for each graph node. The resulting backbone graph can be clustered using standard community discovery algorithms such as Metis and Markov clustering. Through extensive experiments on multiple real-world datasets (Flickr, Wikipedia and CiteSeer) with varying sizes and characteristics, we demonstrate the effectiveness and efficiency of our methods over state-of-the-art learning and mining approaches several of which also attempt to combine link and content analysis for the purposes of community discovery. Specifically we always find a qualitative benefit when combining content with link analysis. Additionally our biased graph sampling approach realizes a quantitative benefit in that it is typically several orders of magnitude faster than competing approaches. We consider the task of topology discovery of sparse random graphs using end-to-end random measurements (e.g., delay) between a subset of nodes, referred to as the participants. The rest of the nodes are hidden, and do not provide any information for topology discovery. We consider topology discovery under two routing models: (a) the participants exchange messages along the shortest paths and obtain end-to-end measurements, and (b) additionally, the participants exchange messages along the second shortest path. For scenario (a), our proposed algorithm results in a sub-linear edit-distance guarantee using a sub-linear number of uniformly selected participants. For scenario (b), we obtain a much stronger result, and show that we can achieve consistent reconstruction when a sub-linear number of uniformly selected nodes participate. This implies that accurate discovery of sparse random graphs is tractable using an extremely small number of participants. We finally obtain a lower bound on the number of participants required by any algorithm to reconstruct the original random graph up to a given edit distance. We also demonstrate that while consistent discovery is tractable for sparse random graphs using a small number of participants, in general, there are graphs which cannot be discovered by any algorithm even with a significant number of participants, and with the availability of end-to-end information along all the paths between the participants. © 2012 Wiley Periodicals, Inc. Random Struct. Alg., 2013 Motivation: Analogous to biological sequence comparison, comparing cellular networks is an important problem that could provide insight into biological understanding and therapeutics. For technical reasons, comparing large networks is computationally infeasible, and thus heuristics, such as the degree distribution, clustering coefficient, diameter, and relative graphlet frequency distribution have been sought. It is easy to demonstrate that two networks are different by simply showing a short list of properties in which they differ. It is much harder to show that two networks are similar, as it requires demonstrating their similarity in all of their exponentially many properties. Clearly, it is computationally prohibitive to analyze all network properties, but the larger the number of constraints we impose in determining network similarity, the more likely it is that the networks will truly be similar. Results: We introduce a new systematic measure of a network's local structure that imposes a large number of similarity constraints on networks being compared. In particular, we generalize the degree distribution, which measures the number of nodes 'touching' k edges, into distributions measuring the number of nodes 'touching' k graphlets, where graphlets are small connected non-isomorphic subgraphs of a large network. Our new measure of network local structure consists of 73 graphlet degree distributions of graphlets with 2--5 nodes, but it is easily extendible to a greater number of constraints (i.e. graphlets), if necessary, and the extensions are limited only by the available CPU. Furthermore, we show a way to combine the 73 graphlet degree distributions into a network 'agreement' measure which is a number between 0 and 1, where 1 means that networks have identical distributions and 0 means that they are far apart. Based on this new network agreement measure, we show that almost all of the 14 eukaryotic PPI networks, including human, resulting from various high-throughput experimental techniques, as well as from curated databases, are better modeled by geometric random graphs than by Erdos--Reny, random scale-free, or Barabasi--Albert scale-free networks. Availability: Software executables are available upon request. Contact: natasha@ics.uci.edu The discovery and analysis of community structure in networks is a topic of considerable recent interest within the physics community, but most methods proposed so far are unsuitable for very large networks because of their computational cost. Here we present a hierarchical agglomeration algorithm for detecting community structure which is faster than many competing algorithms: its running time on a network with n vertices and m edges is O(m d log n) where d is the depth of the dendrogram describing the community structure. Many real-world networks are sparse and hierarchical, with m n and d log n, in which case our algorithm runs in essentially linear time, O(n log^2 n). As an example of the application of this algorithm we use it to analyze a network of items for sale on the web-site of a large online retailer, items in the network being linked if they are frequently purchased by the same buyer. The network has more than 400,000 vertices and 2 million edges. We show that our algorithm can extract meaningful communities from this network, revealing large-scale patterns present in the purchasing habits of customers. Many real-world domains can be represented as large node-link graphs: backbone Internet routers connect with 70,000 other hosts, mid-sized Web servers handle between 20,000 and 200,000 hyperlinked documents, and dictionaries contain millions of words defined in terms of each other. Computational manipulation of such large graphs is common, but previous tools for graph visualization have been limited to datasets of a few thousand nodes. Visual depictions of graphs and networks are external representations that exploit human visual processing to reduce the cognitive load of many tasks that require understanding of global or local structure. We assert that the two key advantages of computer-based systems for information visualization over traditional paper-based visual exposition are interactivity and scalability. We also argue that designing visualization software by taking the characteristics of a target user's task domain into account leads to systems that are more effective and scale to larger datasets than previous work. This thesis contains a detailed analysis of three specialized systems for the interactive exploration of large graphs, relating the intended tasks to the spatial layout and visual encoding choices. We present two novel algorithms for specialized layout and drawing that use quite different visual metaphors. The H3 system for visualizing the hyperlink structures of web sites scales to datasets of over 100,000 nodes by using a carefully chosen spanning tree as the layout backbone, 3D hyperbolic geometry for a Focus+Context view, and provides a fluid interactive experience through guaranteed frame rate drawing. The Constellation system features a highly specialized 2D layout intended to spatially encode domain-specific information for computational linguists checking the plausibility of a large semantic network created from dictionaries. The Planet Multicast system for displaying the tunnel topology of the Internet's multicast backbone provides a literal 3D geographic layout of arcs on a globe to help MBone maintainers find misconfigured long-distance tunnels. Each of these three systems provides a very different view of the graph structure, and we evaluate their efficacy for the intended task. We generalize these findings in our analysis of the importance of interactivity and specialization for graph visualization systems that are effective and scalable. Uncovering the community structure exhibited by real networks is a crucial step toward an understanding of complex systems that goes beyond the local organization of their constituents. Many algorithms have been proposed so far, but none of them has been subjected to strict tests to evaluate their performance. Most of the sporadic tests performed so far involved small networks with known community structure and or artificial graphs with a simplified structure, which is very uncommon in real systems. Here we test several methods against a recently introduced class of benchmark graphs, with heterogeneous distributions of degree and community size. The methods are also tested against the benchmark by Girvan and Newman [Proc. Natl. Acad. Sci. U.S.A. 99, 7821 (2002)] and on random graphs. As a result of our analysis, three recent algorithms introduced by Rosvall and Bergstrom [Proc. Natl. Acad. Sci. U.S.A. 104, 7327 (2007); Proc. Natl. Acad. Sci. U.S.A. 105, 1118 (2008)], [J. Stat. Mech.: Theory Exp. (2008), P10008], and Ronhovde and Nussinov [Phys. Rev. E 80, 016109 (2009)] have an excellent performance, with the additional advantage of low computational complexity, which enables one to analyze large systems. Predicting the occurrence of links is a fundamental problem in networks. In the link prediction problem we are given a snapshot of a network and would like to infer which interactions among existing members are likely to occur in the near future or which existing interactions are we missing. Although this problem has been extensively studied, the challenge of how to effectively combine the information from the network structure with rich node and edge attribute data remains largely open. We develop an algorithm based on Supervised Random Walks that naturally combines the information from the network structure with node and edge level attributes. We achieve this by using these attributes to guide a random walk on the graph. We formulate a supervised learning task where the goal is to learn a function that assigns strengths to edges in the network such that a random walker is more likely to visit the nodes to which new links will be created in the future. We develop an efficient training algorithm to directly learn the edge strength estimation function. Our experiments on the Facebook social graph and large collaboration networks show that our approach outperforms state-of-the-art unsupervised approaches as well as approaches that are based on feature extraction. Predicting the occurrence of links is a fundamental problem in networks. In the link prediction problem we are given a snapshot of a network and would like to infer which interactions among existing members are likely to occur in the near future or which existing interactions are we missing. Although this problem has been extensively studied, the challenge of how to effectively combine the information from the network structure with rich node and edge attribute data remains largely open. We develop an algorithm based on Supervised Random Walks that naturally combines the information from the network structure with node and edge level attributes. We achieve this by using these attributes to guide a random walk on the graph. We formulate a supervised learning task where the goal is to learn a function that assigns strengths to edges in the network such that a random walker is more likely to visit the nodes to which new links will be created in the future. We develop an efficient training algorithm to directly learn the edge strength estimation function. Our experiments on the Facebook social graph and large collaboration networks show that our approach outperforms state-of-the-art unsupervised approaches as well as approaches that are based on feature extraction. Link prediction is a fundamental problem in social network analysis. The key technique in unsupervised link prediction is to find an appropriate similarity measure between nodes of a network. A class of wildly used similarity measures are based on random walk on graph. The traditional random walk (TRW) considers the link structures by treating all nodes in a network equivalently, and ignores the centrality of nodes of a network. However, in many real networks, nodes of a network not only prefer to link to the similar node, but also prefer to link to the central nodes of the network. To address this issue, we use maximal entropy random walk (MERW) for link prediction, which incorporates the centrality of nodes of the network. First, we study certain important properties of MERW on graph @math by constructing an eigen-weighted graph G. We show that the transition matrix and stationary distribution of MERW on G are identical to the ones of TRW on G. Based on G, we further give the maximal entropy graph Laplacians, and show how to fast compute the hitting time and commute time of MERW. Second, we propose four new graph kernels and two similarity measures based on MERW for link prediction. Finally, to exhibit the power of MERW in link prediction, we compare 27 various link prediction methods over 3 synthetic and 8 real networks. The results show that our newly proposed MERW based methods outperform the state-of-the-art method on most datasets. This work presents a novel modeling and analysis framework for graph sequences which addresses the challenge of detecting and contextualizing anomalies in labeled, streaming graph data. We introduce a generalization of the BTER model of by adding flexibility to community structure, and use this model to perform multi-scale graph anomaly detection. Specifically, probability models describing coarse subgraphs are built by aggregating node probabilities, and these related hierarchical models simultaneously detect deviations from expectation. This technique provides insight into the graphs' structure and helps contextualized detected event. For evaluation, two new hierarchical detectors are tested against a baseline Gaussian method on a synthetic graph sequence with seeded anomalies. We demonstrate that in a labeled setting with community structure, our graph statistics-based approach outperforms both a distribution-based detector and the baseline, accurately detecting anomalies at the node, subgraph, and graph levels. This work addresses graph-based semi-supervised classification and betweenness computation in large, sparse, networks (several millions of nodes). The objective of semi-supervised classification is to assign a label to unlabeled nodes using the whole topology of the graph and the labeling at our disposal. Two approaches are developed to avoid explicit computation of pairwise proximity between the nodes of the graph, which would be impractical for graphs containing millions of nodes. The first approach directly computes, for each class, the sum of the similarities between the nodes to classify and the labeled nodes of the class, as suggested initially in [1,2]. Along this approach, two algorithms exploiting different state-of-the-art kernels on a graph are developed. The same strategy can also be used in order to compute a betweenness measure. The second approach works on a trellis structure built from biased random walks on the graph, extending an idea introduced in [3]. These random walks allow to define a biased bounded betweenness for the nodes of interest, defined separately for each class. All the proposed algorithms have a linear computing time in the number of edges while providing good results, and hence are applicable to large sparse networks. They are empirically validated on medium-size standard data sets and are shown to be competitive with state-of-the-art techniques. Finally, we processed a novel data set, which is made available for benchmarking, for multi-class classification in a large network: the U.S. patents citation network containing 3M nodes (of six different classes) and 38M edges. The three proposed algorithms achieve competitive results (around 85 classification rate) on this large network-they classify the unlabeled nodes within a few minutes on a standard workstation. In practical military or first responder deployment scenarios, information flows need to adhere to specified policies regardless of the physical connectivity of nodes. Nodes in such networks are associated with various levels in a command-and-control hierarchy, and therefore typically form a logical hierarchical tree network that is used to route both command and data traffic. Associated with this logical hierarchical network is a communication network that represents the connectivity of these nodes in the deployed scenario. Such composite networks introduce constraints that can result in information flows having to traverse much longer paths in the underlying communication network. In this paper, we look at the problem of adding edges to a logical hierarchical network (or any other social network) so as to minimize the number of hops required to route data traffic in the underlying communication network from a node to other specified nodes. The edges added are a subset of all possible edges in the complementary logical hierarchical graph and have to satisfy specified hierarchical constraints. First, we consider the general problem of minimizing the eccentricity of a source node 's' (where eccentricity of 's' is the maximum of the shortest paths from 's' to all other nodes) in a metric graph on adding upto 'B' unequal cost metric edges from the set of all edges in the complementary graph. We develop an efficient constant factor approximation algorithm for this case that outperforms existing constant factor algorithms for eccentricity minimization. Here the added edge metric cost as well as the graph edge metric cost correspond to the number of hops in the shortest path required to route traffic in the actual deployed topology (i.e., underlying communication network). Next, we consider the case where the set of possible added edges is a specified subset of the edges in the complementary graph and the set of destinations is a subset of the graph nodes. For this case, we develop heuristic algorithms based on the previous eccentricity minimizing algorithm that show good performance. We validate our algorithms using two realistic military deployment scenarios. We find that adding even a low number of hierarchically constrained edges (of the order of 10) can cause a significant decrease (around 50 ) in the eccentricity of a node in the logical hierarchical network and thus can reduce the number of hops required for data traffic traversal. An accurate Internet topology graph is important in many areas of networking, from deciding ISP business relationships to diagnosing network anomalies. Most Internet mapping efforts have derived the network structure, at the level of interconnected autonomous systems (ASes), from a limited number of either BGP- or traceroute- based data sources. While techniques for charting the topology continue to improve, the growth of the number of vantage points is significantly outpaced by the rapid growth of the Internet. In this paper, we argue that a promising approach to revealing the hidden areas of the Internet topology is through active measurement from an observation platform that scales with the growing Internet. By leveraging measurements performed by an extension to a popular P2P system, we show that this approach indeed exposes significant new topological information. Based on traceroute measurements from more than 992,000 IPs in over 3,700 ASes distributed across the Internet hierarchy, our proposed heuristics identify 23,914 new AS links not visible in the publicly-available BGP data - 12.86 more customer-provider links and 40.99 more peering links, than previously reported. We validate our heuristics using data from a tier-1 ISP and show that they correctly filter out all false links introduced by public IP-to-AS mapping. We have made the identified set of links and their inferred relationships publically available Graph clustering has been widely applied in exploring regularities emerging in relational data. Recently, the rapid development of network theory correlates graph clustering with the detection of community structure, a common and important topological characteristic of networks. Most existing methods investigate the community structure at a single topological scale. However, as shown by empirical studies, the community structure of real world networks often exhibits multiple topological descriptions, corresponding to the clustering at different resolutions. Furthermore, the detection of multiscale community structure is heavily affected by the heterogeneous distribution of node degree. It is very challenging to detect multiscale community structure in heterogeneous networks. In this paper, we propose a novel, unified framework for detecting community structure from the perspective of dimensionality reduction. Based on the framework, we first prove that the well-known Laplacian matrix for network partition and the widely-used modularity matrix for community detection are two kinds of covariance matrices used in dimensionality reduction. We then propose a novel method to detect communities at multiple topological scales within our framework. We further show that existing algorithms fail to deal with heterogeneous node degrees. We develop a novel method to handle heterogeneity of networks by introducing a rescaling transformation into the covariance matrices in our framework. Extensive tests on real world and artificial networks demonstrate that the proposed correlation matrices significantly outperform Laplacian and modularity matrices in terms of their ability to identify multiscale community structure in heterogeneous networks. We propose a new Monte Carlo method, based on dynamic importance sampling, to estimate the probability that a given set of nodes is connected in a graph (or network) where each link is failed with a given probability. The method generates the link states one by one, using a sampling strategy that approximates an ideal zero-variance importance sampling scheme. The approximation is based on minimal cuts in subgraphs. In an asymptotic rare-event regime where failure probability becomes very small, we prove that the relative error of our estimator remains bounded, and even converges to 0 under additional conditions, when the unreliability of individual links converges to 0. The empirical performance of the new sampling scheme is illustrated by examples. Comparing graphs to determine the level of underlying structural similarity between them is a widely encountered problem in computer science. It is particularly relevant to the study of Internet topologies, such as the generation of synthetic topologies to represent the Internet's AS topology. We derive a new metric that enables exactly such a structural comparison: the weighted spectral distribution. We then apply this metric to three aspects of the study of the Internet's AS topology. i) We use it to quantify the effect of changing the mixing properties of a simple synthetic network generator. ii) We use this quantitative understanding to examine the evolution of the Internet's AS topology over approximately seven years, finding that the distinction between the Internet core and periphery has blurred over time. iii) We use the metric to derive optimal parameterizations of several widely used AS topology generators with respect to a large-scale measurement of the real AS topology. Graphs or networks can be used to model complex systems. Detecting community structures from large network data is a classic and challenging task. In this paper, we propose a novel community detection algorithm, which utilizes a dynamic process by contradicting the network topology and the topology-based propinquity, where the propinquity is a measure of the probability for a pair of nodes involved in a coherent community structure. Through several rounds of mutual reinforcement between topology and propinquity, the community structures are expected to naturally emerge. The overlapping vertices shared between communities can also be easily identified by an additional simple postprocessing. To achieve better efficiency, the propinquity is incrementally calculated. We implement the algorithm on a vertex-oriented bulk synchronous parallel(BSP) model so that the mining load can be distributed on thousands of machines. We obtained interesting experimental results on several real network data. In this paper we study the problem of building a constant-degree connected dominating set (CCDS), a network structure that can be used as a communication backbone, in the dual graph radio network model ( in J Parallel Distrib Comput 64:89–96, 2004; in Proceedings of the international symposium on principles of distributed computing 2009, Distrib Comput 24(3–4):187–206 2011, Proceedings of the international symposium on principles of distributed computing 2010). This model includes two types of links: reliable, which always deliver messages, and unreliable, which sometimes fail to deliver messages. Real networks compensate for this differing quality by deploying low-layer detection protocols to filter unreliable from reliable links. With this in mind, we begin by presenting an algorithm that solves the CCDS problem in the dual graph model under the assumption that every process (u ) is provided with a local link detector set consisting of every neighbor connected to (u ) by a reliable link. The algorithm solves the CCDS problem in (O ( ^2 n b + ^3 n ) ) rounds, with high probability, where ( ) is the maximum degree in the reliable link graph, (n ) is the network size, and (b ) is an upper bound in bits on the message size. The algorithm works by first building a Maximal Independent Set (MIS) in ( ^3 n ) time, and then leveraging the local topology knowledge to efficiently connect nearby MIS processes. A natural follow-up question is whether the link detector must be perfectly reliable to solve the CCDS problem. With this in mind, we first describe an algorithm that builds a CCDS in (O( )polylog ((n)) ) time under the assumption of (O(1) ) unreliable links included in each link detector set. We then prove this algorithm to be (almost) tight by showing that the possible inclusion of only a single unreliable link in each process’s local link detector set is sufficient to require ( ( ) ) rounds to solve the CCDS problem, regardless of message size. We conclude by discussing how to apply our algorithm in the setting where the topology of reliable and unreliable links can change over time. Determining interrelatedness structure of various entities from multiple time series data is of significant interest to many areas. Knowledge of such a structure can aid in identifying cause and effect relationships, clustering of similar entities, identification of representative elements and model reduction. The majority of existing results are based on correlation based indices which effectively assume a static relationship between the time series data and are not suitable for detecting interrelatedness when the time series are dynamically related or when the time series involve loops. In this paper, a methodology for identifying the interrelatedness structure of dynamically related time series data is presented that also allows for the presence of loops in the connectivity structure. A linear dynamic graph model is presented where it is assumed that each time series data is the sum of an independent stochastic noise source and a dynamically weighted sum of other time series data. A link is assumed to be present between two time series if the weight of a time series, which is a linear time-invariant filter, is nonzero in the formation of the other. Reconstruction of the link connectivity structure under various scenarios is considered. It is shown that when the linear dynamic graph is allowed to admit non-causal weights, then the links structure can be recovered with the possibility of identifying spurious connections. However, it is shown that the spurious links remain local, where, a spurious link is restricted to be within one hop of a true link. Furthermore, strategies for exact reconstruction of the link structure when the weights are restricted to be causal are developed. The main tools for determining the network topology are based on variations of Wiener filtering. A significant insight provided by the article is that, in the class of network models considered in the paper, the Wiener filter estimating a stochastic process based on other processes remains local in the sense that the Wiener filter utilizes only measurements local to the node being estimated.