Network representation learning (NRL) aims to learn low-dimensional vectors for vertices in a network. Most existing NRL methods focus on learning representations from local context of vertices (such as their neighbors). Nevertheless, vertices in many complex networks also exhibit significant global patterns widely known as communities. It's intuitive that vertices in the same community tend to connect densely and share common attributes. These patterns are expected to improve NRL and benefit relevant evaluation tasks, such as link prediction and vertex classification. Inspired by the analogy between network representation learning and text modeling, we propose a unified NRL framework by introducing community information of vertices, named as Community-enhanced Network Representation Learning (CNRL). CNRL simultaneously detects community distribution of each vertex and learns embeddings of both vertices and communities. Moreover, the proposed community enhancement mechanism can be applied to various existing NRL models. In experiments, we evaluate our model on vertex classification, link prediction, and community detection using several real-world datasets. The results demonstrate that CNRL significantly and consistently outperforms other state-of-the-art methods while verifying our assumptions on the correlations between vertices and communities.
In recent years, community affiliation based algorithms show their effectiveness on overlapping community detection @cite_25 @cite_33 @cite_39 @cite_38 . Community affiliation based algorithms predefine the number of communities and learn a vertex-community strength vector for each vertex and assign communities to vertices according to the vector. For example, Yang @cite_38 proposes Non-negative Matrix Factorization (NMF) method, which approximates adjacency matrix @math by @math where matrix @math is vertex-community affinity matrix. Then the algorithm learns non-negative vertex embeddings and converts each dimension of the embeddings into a community. These community affiliation based algorithms try to approximate the adjacency matrix in value and design different objective functions for it. Our model follows the idea to represent the community relationship with a non-negative vector, but we don't explicitly set hard community membership for the vertices.
@cite_38 @cite_25 @cite_33 @cite_39
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Community detection is an important technique to understand structures and patterns in complex networks. Recently, overlapping community detection becomes a trend due to the ubiquity of overlapping and nested communities in real world. However, existing approaches have ignored the use of implicit link preference information, i.e., links can reflect a node's preference on the targets of connections it wants to build. This information has strong impact on community detection since a node prefers to build links with nodes inside its community than those outside its community. In this paper, we propose a preference-based nonnegative matrix factorization (PNMF) model to incorporate implicit link preference information. Unlike conventional matrix factorization approaches, which simply approximate the original adjacency matrix in value, our model maximizes the likelihood of the preference order for each node by following the intuition that a node prefers its neighbors than other nodes. Our model overcomes the indiscriminate penalty problem in which non-linked pairs inside one community are equally penalized in objective functions as those across two communities. We propose a learning algorithm which can learn a node-community membership matrix via stochastic gradient descent with bootstrap sampling. We evaluate our PNMF model on several real-world networks. Experimental results show that our model outperforms state-of-the-art approaches and can be applied to large datasets. Graph clustering has been widely applied in exploring regularities emerging in relational data. Recently, the rapid development of network theory correlates graph clustering with the detection of community structure, a common and important topological characteristic of networks. Most existing methods investigate the community structure at a single topological scale. However, as shown by empirical studies, the community structure of real world networks often exhibits multiple topological descriptions, corresponding to the clustering at different resolutions. Furthermore, the detection of multiscale community structure is heavily affected by the heterogeneous distribution of node degree. It is very challenging to detect multiscale community structure in heterogeneous networks. In this paper, we propose a novel, unified framework for detecting community structure from the perspective of dimensionality reduction. Based on the framework, we first prove that the well-known Laplacian matrix for network partition and the widely-used modularity matrix for community detection are two kinds of covariance matrices used in dimensionality reduction. We then propose a novel method to detect communities at multiple topological scales within our framework. We further show that existing algorithms fail to deal with heterogeneous node degrees. We develop a novel method to handle heterogeneity of networks by introducing a rescaling transformation into the covariance matrices in our framework. Extensive tests on real world and artificial networks demonstrate that the proposed correlation matrices significantly outperform Laplacian and modularity matrices in terms of their ability to identify multiscale community structure in heterogeneous networks. We consider the problem of fuzzy community detection in networks, which complements and expands the concept of overlapping community structure. Our approach allows each vertex of the graph to belong to multiple communities at the same time, determined by exact numerical membership degrees, even in the presence of uncertainty in the data being analyzed. We create an algorithm for determining the optimal membership degrees with respect to a given goal function. Based on the membership degrees, we introduce a measure that is able to identify outlier vertices that do not belong to any of the communities, bridge vertices that have significant membership in more than one single community, and regular vertices that fundamentally restrict their interactions within their own community, while also being able to quantify the centrality of a vertex with respect to its dominant community. The method can also be used for prediction in case of uncertainty in the data set analyzed. The number of communities can be given in advance, or determined by the algorithm itself, using a fuzzified variant of the modularity function. The technique is able to discover the fuzzy community structure of different real world networks including, but not limited to, social networks, scientific collaboration networks, and cortical networks, with high confidence. We introduce an algorithm for a non-negative 3D tensor factorization for the purpose of establishing a local parts feature decomposition from an object class of images. In the past, such a decomposition was obtained using non-negative matrix factorization (NMF) where images were vectorized before being factored by NMF. A tensor factorization (NTF) on the other hand preserves the 2D representations of images and provides a unique factorization (unlike NMF which is not unique). The resulting "factors" from the NTF factorization are both sparse (like with NMF) but also separable allowing efficient convolution with the test image. Results show a superior decomposition to what an NMF can provide on all fronts - degree of sparsity, lack of ghost residue due to invariant parts and efficiency of coding of around an order of magnitude better. Experiments on using the local parts decomposition for face detection using SVM and Adaboost classifiers demonstrate that the recovered features are discriminatory and highly effective for classification. Community detection is the task of detecting hidden communities from observed interactions. Guaranteed community detection has so far been mostly limited to models with non-overlapping communities such as the stochastic block model. In this paper, we remove this restriction, and provide guaranteed community detection for a family of probabilistic network models with overlapping communities, termed as the mixed membership Dirichlet model, first introduced by (2008). This model allows for nodes to have fractional memberships in multiple communities and assumes that the community memberships are drawn from a Dirichlet distribution. Moreover, it contains the stochastic block model as a special case. We propose a unified approach to learning these models via a tensor spectral decomposition method. Our estimator is based on low-order moment tensor of the observed network, consisting of 3-star counts. Our learning method is fast and is based on simple linear algebraic operations, e.g., singular value decomposition and tensor power iterations. We provide guaranteed recovery of community memberships and model parameters and present a careful finite sample analysis of our learning method. As an important special case, our results match the best known scaling requirements for the (homogeneous) stochastic block model. Non-negative matrix factorization (NMF), i.e. V ap WH where both V, W and H are non-negative has become a widely used blind source separation technique due to its part based representation. The NMF decomposition is not in general unique and a part based representation not guaranteed. However, imposing sparseness both improves the uniqueness of the decomposition and favors part based representation. Sparseness in the form of attaining as many zero elements in the solution as possible is appealing from a conceptional point of view and corresponds to minimizing reconstruction error with an L0 norm constraint. In general, solving for a given L0 norm is an NP hard problem thus convex relaxation to regularization by the L1 norm is often considered, i.e., minimizing (1 2||V - WH||F 2 + lambda||H||1).An open problem is to control the degree of sparsity lambda imposed. We here demonstrate that a full regularization path for the L1 norm regularized least squares NMF for fixed W can be calculated at the cost of an ordinary least squares solution based on a modification of the least angle regression and selection (LARS) algorithm forming a non-negativity constrained LARS (NLARS). With the full regularization path, the L1 regularization strength lambda that best approximates a given L0 can be directly accessed and in effect used to control the sparsity of H. The MATLAB code for the NLARS algorithm is available for download. Non-negative matrix factorization (NMF) has recently received a lot of attention in data mining, information retrieval, and computer vision. It factorizes a non-negative input matrix V into two non-negative matrix factors V = WH such that W describes "clusters" of the datasets. Analyzing genotypes, social networks, or images, it can be beneficial to ensure V to contain meaningful cluster centroids'', i.e., to restrict W to be convex combinations of data points. But how can we run this convex NMF in the wild, i.e., given millions of data points? Triggered by the simple observation that each data point is a convex combination of vertices of the data convex hull, we propose to restrict W further to be vertices of the convex hull. The benefits of this convex-hull NMF approach are twofold. First, the expected size of the convex hull of the candidate set typically grows much slower than the data set. Second, distance preserving low-dimensional embeddings allow one to compute candidate vertices efficiently. Our extensive experimental evaluation shows that convex-hull NMF compares favorably to convex NMF for large data sets both in terms of speed and reconstruction quality. Moreover, we show that our method can easily be applied to large-scale, real-world data sets, in our case consisting of 1.6 million images respectively 160 million votes on World of Warcraft guilds. We propose an algorithm for finding overlapping community structure in very large networks. The algorithm is based on the label propagation technique of Raghavan, Albert and Kumara, but is able to detect communities that overlap. Like the original algorithm, vertices have labels that propagate between neighbouring vertices so that members of a community reach a consensus on their community membership. Our main contribution is to extend the label and propagation step to include information about more than one community: each vertex can now belong to up to v communities, where v is the parameter of the algorithm. Our algorithm can also handle weighted and bipartite networks. Tests on an independently designed set of benchmarks, and on real networks, show the algorithm to be highly effective in recovering overlapping communities. It is also very fast and can process very large and dense networks in a short time. Detecting hidden communities from observed interactions is a classical problem. Theoretical analysis of community detection has so far been mostly limited to models with non-overlapping communities such as the stochastic block model. In this paper, we provide guaranteed community detection for a family of probabilistic network models with overlapping communities, termed as the mixed membership Dirichlet model, first introduced in (2008). This model allows for nodes to have fractional memberships in multiple communities and assumes that the community memberships are drawn from a Dirichlet distribution. Moreover, it contains the stochastic block model as a special case. We propose a unified approach to learning communities in these models via a tensor spectral decomposition approach. Our estimator uses low-order moment tensor of the observed network, consisting of 3-star counts. Our learning method is based on simple linear algebraic operations such as singular value decomposition and tensor power iterations. We provide guaranteed recovery of community memberships and model parameters, and present a careful finite sample analysis of our learning method. Additionally, our results match the best known scaling requirements for the special case of the (homogeneous) stochastic block model. Communities of vertices within a giant network such as the World-Wide Web are likely to be vastly smaller than the network itself. However, Fortunato and Barth ' e lemy have proved that modularity maximization algorithms for community detection may fail to resolve communities with fewer than @math edges, where @math is the number of edges in the entire network. This resolution limit leads modularity maximization algorithms to have notoriously poor accuracy on many real networks. Fortunato and Barth ' e lemy's argument can be extended to networks with weighted edges as well, and we derive this corollary argument. We conclude that weighted modularity algorithms may fail to resolve communities with fewer than @math total edge weight, where @math is the total edge weight in the network and @math is the maximum weight of an inter-community edge. If @math is small, then small communities can be resolved. Given a weighted or unweighted network, we describe how to derive new edge weights in order to achieve a low @math , we modify the CNM'' community detection algorithm to maximize weighted modularity, and show that the resulting algorithm has greatly improved accuracy. In experiments with an emerging community standard benchmark, we find that our simple CNM variant is competitive with the most accurate community detection methods yet proposed. A simple deterministic algorithm for community detection is provided by using two rounds of minimum spanning trees. By comparing the first round minimum spanning tree (1st-MST) with the second round spanning tree (2nd-MST) of the network, communities are detected and their overlapping nodes are also identified. To generate the two MSTs, a distance matrix is defined and computed from the adjacent matrix of the network. Compared with the resistance matrix or the communicability matrix used in community detection in the literature, the proposed distance matrix is very simple in computation. The proposed algorithm is tested on real world social networks, graphs which are failed by the modularity maximization, and the LFR benchmark graphs for community detection. In this paper, we introduce a game-theoretic framework to address the community detection problem based on the structures of social networks. We formulate the dynamics of community formation as a strategic game called community formation game: Given an underlying social graph, we assume that each node is a selfish agent who selects communities to join or leave based on her own utility measurement. A community structure can be interpreted as an equilibrium of this game. We formulate the agents' utility by the combination of a gain function and a loss function. We allow each agent to select multiple communities, which naturally captures the concept of "overlapping communities". We propose a gain function based on the modularity concept introduced by Newman (Proc Natl Acad Sci 103(23):8577---8582, 2006), and a simple loss function that reflects the intrinsic costs incurred when people join the communities. We conduct extensive experiments under this framework, and our results show that our algorithm is effective in identifying overlapping communities, and are often better then other algorithms we evaluated especially when many people belong to multiple communities. To the best of our knowledge, this is the first time the community detection problem is addressed by a game-theoretic framework that considers community formation as the result of individual agents' rational behaviors. We consider the problem of community detection in the Stochastic Block Model with a finite number @math of communities of sizes linearly growing with the network size @math . This model consists in a random graph such that each pair of vertices is connected independently with probability @math within communities and @math across communities. One observes a realization of this random graph, and the objective is to reconstruct the communities from this observation. We show that under spectral algorithms, the number of misclassified vertices does not exceed @math with high probability as @math grows large, whenever @math , @math and where @math and @math denote the (fixed) proportions of vertices in the two smallest communities. In view of recent work by and , this establishes that the proposed spectral algorithms are able to exactly recover communities whenever this is at all possible in the case of networks with two communities with equal sizes. We conjecture that condition (1) is actually necessary to obtain less than @math misclassified vertices asymptotically, which would establish the optimality of spectral method in more general scenarios. This paper proposes a novel method based on fuzzy clustering to detect community structure in complex networks. In contrast to previous studies, our method does not focus on a graph model, but rather on a fuzzy relation model, which uses the operations of fuzzy relation to replace a traversal search of the graph for identifying community structure. In our method, we first use a fuzzy relation to describe the relation between vertices as well as the similarity in network topology to determine the membership grade of the relation. Then, we transform this fuzzy relation into a fuzzy equivalence relation. Finally, we map the non-overlapping communities as equivalence classes that satisfy a certain equivalence relation. Because most real-world networks are made of overlapping communities (e.g., in social networks, people may belong to multiple communities), we can consider the equivalence classes above as the skeletons of overlapping communities and extend our method by adding vertices to the skeletons to identify overlapping communities. We evaluated our method on artificial networks with built-in communities and real-world networks with known and unknown communities. The experimental results show that our method works well for detecting these communities and gives a new understanding of network division and community formation. Nonnegative Matrix Factorization (NMF) is an effective dimension reduction method for non-negative dyadic data, and has proven to be useful in many areas, such as text mining, bioinformatics and image processing. NMF is usually formulated as a constrained non-convex optimization problem, and many algorithms have been developed for solving it. Recently, a coordinate descent method, called FastHals, has been proposed to solve least squares NMF and is regarded as one of the state-of-the-art techniques for the problem. In this paper, we first show that FastHals has an inefficiency in that it uses a cyclic coordinate descent scheme and thus, performs unneeded descent steps on unimportant variables. We then present a variable selection scheme that uses the gradient of the objective function to arrive at a new coordinate descent method. Our new method is considerably faster in practice and we show that it has theoretical convergence guarantees. Moreover when the solution is sparse, as is often the case in real applications, our new method benefits by selecting important variables to update more often, thus resulting in higher speed. As an example, on a text dataset RCV1, our method is 7 times faster than FastHals, and more than 15 times faster when the sparsity is increased by adding an L1 penalty. We also develop new coordinate descent methods when error in NMF is measured by KL-divergence by applying the Newton method to solve the one-variable sub-problems. Experiments indicate that our algorithm for minimizing the KL-divergence is faster than the Lee & Seung multiplicative rule by a factor of 10 on the CBCL image dataset. Despite the prevalence of community detection algorithms, relatively less work has been done on understanding whether a network is indeed modular and how resilient the community structure is under perturbations. To address this issue, we propose a new vertex-based metric called "permanence", that can quantitatively give an estimate of the community- like structure of the network. The central idea of permanence is based on the observation that the strength of membership of a vertex to a community depends upon the following two factors: (i) the distribution of external connectivity of the vertex to individual communities and not the total external connectivity, and (ii) the strength of its internal connectivity and not just the total internal edges. In this paper, we demonstrate that compared to other metrics, permanence provides (i) a more accurate estimate of a derived community structure to the ground-truth community and (ii) is more sensitive to perturbations in the network. As a by-product of this study, we have also developed a community detection algorithm based on maximizing permanence. For a modular network structure, the results of our algorithm match well with ground-truth communities. Community detection is a common problem in various types of big graphs. It is meaningful to understand the functions and dynamics of networks. The challenges of detecting community for big graphs include high computational cost, no prior information, etc.. In this work, we analyze the process of random walking in graphs, and find out that the weight of an edge gotten by processing the vertices visited by the walker could be an indicator to measure the closeness of vertex connection. Based on this idea, we propose a community detection algorithm for undirected big graphs which consists of three steps, including random walking using a single walker, weight calculating for edges and community detecting. Our algorithm is running in O(n2) without prior information. Experimental results show that our algorithm is capable of detecting the community structure and the overlapping parts of graphs in real-world effectively, and handling the challenges of community detection in big graph era. Complex networks are ubiquitous in our daily life, with the World Wide Web, social networks, and academic citation networks being some of the common examples. It is well understood that modeling and understanding the network structure is of crucial importance to revealing the network functions. One important problem, known as community detection, is to detect and extract the community structure of networks. More recently, the focus in this research topic has been switched to the detection of overlapping communities. In this paper, based on the matrix factorization approach, we propose a method called bounded nonnegative matrix tri-factorization (BNMTF). Using three factors in the factorization, we can explicitly model and learn the community membership of each node as well as the interaction among communities. Based on a unified formulation for both directed and undirected networks, the optimization problem underlying BNMTF can use either the squared loss or the generalized KL-divergence as its loss function. In addition, to address the sparsity problem as a result of missing edges, we also propose another setting in which the loss function is defined only on the observed edges. We report some experiments on real-world datasets to demonstrate the superiority of BNMTF over other related matrix factorization methods. Community detection, which aims to cluster @math nodes in a given graph into @math distinct groups based on the observed undirected edges, is an important problem in network data analysis. In this paper, the popular stochastic block model (SBM) is extended to the generalized stochastic block model (GSBM) that allows for adversarial outlier nodes, which are connected with the other nodes in the graph in an arbitrary way. Under this model, we introduce a procedure using convex optimization followed by @math -means algorithm with @math . Both theoretical and numerical properties of the method are analyzed. A theoretical guarantee is given for the procedure to accurately detect the communities with small misclassification rate under the setting where the number of clusters can grow with @math . This theoretical result admits to the best-known result in the literature of computationally feasible community detection in SBM without outliers. Numerical results show that our method is both computationally fast and robust to different kinds of outliers, while some popular computationally fast community detection algorithms, such as spectral clustering applied to adjacency matrices or graph Laplacians, may fail to retrieve the major clusters due to a small portion of outliers. We apply a slight modification of our method to a political blogs data set, showing that our method is competent in practice and comparable to existing computationally feasible methods in the literature. To the best of the authors' knowledge, our result is the first in the literature in terms of clustering communities with fast growing numbers under the GSBM where a portion of arbitrary outlier nodes exist. Four major factors govern the intricacies of community extraction in networks: (1) the literature offers a multitude of disparate community detection algorithms whose output exhibits high structural variability across the collection, (2) communities identified by algorithms may differ structurally from real communities that arise in practice, (3) there is no consensus characterizing how to discriminate communities from noncommunities, and (4) the application domain includes a wide variety of networks of fundamentally different natures. In this article, we present a class separability framework to tackle these challenges through a comprehensive analysis of community properties. Our approach enables the assessment of the structural dissimilarity among the output of multiple community detection algorithms and between the output of algorithms and communities that arise in practice. In addition, our method provides us with a way to organize the vast collection of community detection algorithms by grouping those that behave similarly. Finally, we identify the most discriminative graph-theoretical properties of community signature and the small subset of properties that account for most of the biases of the different community detection algorithms. We illustrate our approach with an experimental analysis, which reveals nuances of the structure of real and extracted communities. In our experiments, we furnish our framework with the output of 10 different community detection procedures, representative of categories of popular algorithms available in the literature, applied to a diverse collection of large-scale real network datasets whose domains span biology, online shopping, and social systems. We also analyze communities identified by annotations that accompany the data, which reflect exemplar communities in various domain. We characterize these communities using a broad spectrum of community properties to produce the different structural classes. As our experiments show that community structure is not a universal concept, our framework enables an informed choice of the most suitable community detection method for identifying communities of a specific type in a given network and allows for a comparison of existing community detection algorithms while guiding the design of new ones.