Today, full-texts of scientific articles are often stored in different locations than the used datasets. Dataset registries aim at a closer integration by making datasets citable but authors typically refer to datasets using inconsistent abbreviations and heterogeneous metadata (e.g. title, publication year). It is thus hard to reproduce research results, to access datasets for further analysis, and to determine the impact of a dataset. Manually detecting references to datasets in scientific articles is time-consuming and requires expert knowledge in the underlying research domain.We propose and evaluate a semi-automatic three-step approach for finding explicit references to datasets in social sciences articles.We first extract pre-defined special features from dataset titles in the da|ra registry, then detect references to datasets using the extracted features, and finally match the references found with corresponding dataset titles. The approach does not require a corpus of articles (avoiding the cold start problem) and performs well on a test corpus. We achieved an F-measure of 0.84 for detecting references in full-texts and an F-measure of 0.83 for finding correct matches of detected references in the da|ra dataset registry.
proposed a rule-based citation mining technique @cite_11 . Their approach detects literature references from each document and then extracts citation metadata from each of them, such as title, authors, and venue. Based on the venue, it then extracts all related titles from the DBLP computer science bibliography, which contains more than three million articles. Finally, it tries to link the title of each extracted literature reference and titles found in DBLP.
@cite_11
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This article proposes a process to retrieve the URL of a document for which metadata records exist in a digital library catalog but a pointer to the full text of the document is not available. The process uses results from queries submitted to Web search engines for finding the URL of the corresponding full text or any related material. We present a comprehensive study of this process in different situations by investigating different query strategies applied to three general purpose search engines (Google, Yahoo!, MSN) and two specialized ones (Scholar and CiteSeer), considering five user scenarios. Specifically, we have conducted experiments with metadata records taken from the Brazilian Digital Library of Computing (BDBComp) and The DBLP Computer Science Bibliography (DBLP). We found that Scholar was the most effective search engine for this task in all considered scenarios and that simple strategies for combining and re-ranking results from Scholar and Google significantly improve the retrieval quality. Moreover, we study the influence of the number of query results on the effectiveness of finding missing information as well as the coverage of the proposed scenarios. We propose a new unsupervised learning technique for extracting information from large text collections. We model documents as if they were generated by a two-stage stochastic process. Each author is represented by a probability distribution over topics, and each topic is represented as a probability distribution over words for that topic. The words in a multi-author paper are assumed to be the result of a mixture of each authors' topic mixture. The topic-word and author-topic distributions are learned from data in an unsupervised manner using a Markov chain Monte Carlo algorithm. We apply the methodology to a large corpus of 160,000 abstracts and 85,000 authors from the well-known CiteSeer digital library, and learn a model with 300 topics. We discuss in detail the interpretation of the results discovered by the system including specific topic and author models, ranking of authors by topic and topics by author, significant trends in the computer science literature between 1990 and 2002, parsing of abstracts by topics and authors and detection of unusual papers by specific authors. An online query interface to the model is also discussed that allows interactive exploration of author-topic models for corpora such as CiteSeer. Some large scale topical digital libraries, such as CiteSeer, harvest online academic documents by crawling open-access archives, university and author homepages, and authors' self-submissions. While these approaches have so far built reasonable size libraries, they can suffer from having only a portion of the documents from specific publishing venues. We propose to use alternative online resources and techniques that maximally exploit other resources to build the complete document collection of any given publication venue. We investigate the feasibility of using publication metadata to guide the crawler towards authors' homepages to harvest what is missing from a digital library collection. We collect a real-world dataset from two Computer Science publishing venues, involving a total of 593 unique authors over a time frame of 1998 to 2004. We then identify the missing papers that are not indexed by CiteSeer. Using a fully automatic heuristic-based system that has the capability of locating authors' homepages and then using focused crawling to download the desired papers, we demonstrate that it is practical to harvest using a focused crawler academic papers that are missing from our digital library. Our harvester achieves a performance with an average recall level of 0.82 overall and 0.75 for those missing documents. Evaluation of the crawler's performance based on the harvest rate shows definite advantages over other crawling approaches and consistently outperforms a defined baseline crawler on a number of measures Due to name abbreviations, identical names, name misspellings, and pseudonyms in publications or bibliographies (citations), an author may have multiple names and multiple authors may share the same name. Such name ambiguity affects the performance of document retrieval, Web search, database integration, and may cause improper attribution to authors. We investigate two supervised learning approaches to disambiguate authors in the citations. One approach uses the naive Bayes probability model, a generative model; the other uses support vector machines (SVMs) [V. Vapnik (1995)] and the vector space representation of citations, a discriminative model. Both approaches utilize three types of citation attributes: coauthor names, the title of the paper, and the title of the journal or proceeding. We illustrate these two approaches on two types of data, one collected from the Web, mainly publication lists from homepages, the other collected from the DBLP citation databases. Citation recommendation is an interesting but challenging research problem. Most existing studies assume that all papers adopt the same criterion and follow the same behavioral pattern in deciding relevance and authority of a paper. However, in reality, papers have distinct citation behavioral patterns when looking for different references, depending on paper content, authors and target venues. In this study, we investigate the problem in the context of heterogeneous bibliographic networks and propose a novel cluster-based citation recommendation framework, called ClusCite, which explores the principle that citations tend to be softly clustered into interest groups based on multiple types of relationships in the network. Therefore, we predict each query's citations based on related interest groups, each having its own model for paper authority and relevance. Specifically, we learn group memberships for objects and the significance of relevance features for each interest group, while also propagating relative authority between objects, by solving a joint optimization problem. Experiments on both DBLP and PubMed datasets demonstrate the power of the proposed approach, with 17.68 improvement in Recall@50 and 9.57 growth in MRR over the best performing baseline. This paper reports on a novel technique for literature indexing and searching in a mechanized library system. The notion of relevance is taken as the key concept in the theory of information retrieval and a comparative concept of relevance is explicated in terms of the theory of probability. The resulting technique called “Probabilistic Indexing,” allows a computing machine, given a request for information, to make a statistical inference and derive a number (called the “relevance number”) for each document, which is a measure of the probability that the document will satisfy the given request. The result of a search is an ordered list of those documents which satisfy the request ranked according to their probable relevance. The paper goes on to show that whereas in a conventional library system the cross-referencing (“see” and “see also”) is based solely on the “semantical closeness” between index terms, statistical measures of closeness between index terms can be defined and computed. Thus, given an arbitrary request consisting of one (or many) index term(s), a machine can elaborate on it to increase the probability of selecting relevant documents that would not otherwise have been selected. Finally, the paper suggests an interpretation of the whole library problem as one where the request is considered as a clue on the basis of which the library system makes a concatenated statistical inference in order to provide as an output an ordered list of those documents which most probably satisfy the information needs of the user. Traditional text mining techniques transform free text into flat bags of words representation, which does not preserve sufficient semantics for the purpose of knowledge discovery. In this paper, we present a two-step procedure to mine generalized associations of semantic relations conveyed by the textual content of Web documents. First, RDF (resource description framework) metadata representing semantic relations are extracted from raw text using a myriad of natural language processing techniques. The relation extraction process also creates a term taxonomy in the form of a sense hierarchy inferred from WordNet. Then, a novel generalized association pattern mining algorithm (GP-Close) is applied to discover the underlying relation association patterns on RDF metadata. For pruning the large number of redundant overgeneralized patterns in relation pattern search space, the GP-Close algorithm adopts the notion of generalization closure for systematic overgeneralization reduction. The efficacy of our approach is demonstrated through empirical experiments conducted on an online database of terrorist activities To reveal information hiding in link space of bibliographical networks, link analysis has been studied from different perspectives in recent years. In this paper, we address a novel problem namely citation prediction, that is: given information about authors, topics, target publication venues as well as time of certain research paper, finding and predicting the citation relationship between a query paper and a set of previous papers. Considering the gigantic size of relevant papers, the loosely connected citation network structure as well as the highly skewed citation relation distribution, citation prediction is more challenging than other link prediction problems which have been studied before. By building a meta-path based prediction model on a topic discriminative search space, we here propose a two-phase citation probability learning approach, in order to predict citation relationship effectively and efficiently. Experiments are performed on real-world dataset with comprehensive measurements, which demonstrate that our framework has substantial advantages over commonly used link prediction approaches in predicting citation relations in bibliographical networks. The goal of information extraction is to extract database records from text or semi-structured sources. Traditionally, information extraction proceeds by first segmenting each candidate record separately, and then merging records that refer to the same entities. While computationally efficient, this approach is suboptimal, because it ignores the fact that segmenting one candidate record can help to segment similar ones. For example, resolving a well-segmented field with a less-clear one can disambiguate the latter's boundaries. In this paper we propose a joint approach to information extraction, where segmentation of all records and entity resolution are performed together in a single integrated inference process. While a number of previous authors have taken steps in this direction (eg., (2003), (2004)), to our knowledge this is the first fully joint approach. In experiments on the CiteSeer and Cora citation matching datasets, joint inference improved accuracy, and our approach outperformed previous ones. Further, by using Markov logic and the existing algorithms for it, our solution consisted mainly of writing the appropriate logical formulas, and required much less engineering than previous ones. We approach the problem of academic literature search by considering an unpublished manuscript as a query to a search system. We use the text of previous literature as well as the citation graph that connects it to find relevant related material. We evaluate our technique with manual and automatic evaluation methods, and find an order of magnitude improvement in mean average precision as compared to a text similarity baseline. We propose an unsupervised learning technique for extracting information about authors and topics from large text collections. We model documents as if they were generated by a two-stage stochastic process. An author is represented by a probability distribution over topics, and each topic is represented as a probability distribution over words. The probability distribution over topics in a multi-author paper is a mixture of the distributions associated with the authors. The topic-word and author-topic distributions are learned from data in an unsupervised manner using a Markov chain Monte Carlo algorithm. We apply the methodology to three large text corpora: 150,000 abstracts from the CiteSeer digital library, 1740 papers from the Neural Information Processing Systems (NIPS) Conferences, and 121,000 emails from the Enron corporation. We discuss in detail the interpretation of the results discovered by the system including specific topic and author models, ranking of authors by topic and topics by author, parsing of abstracts by topics and authors, and detection of unusual papers by specific authors. Experiments based on perplexity scores for test documents and precision-recall for document retrieval are used to illustrate systematic differences between the proposed author-topic model and a number of alternatives. Extensions to the model, allowing for example, generalizations of the notion of an author, are also briefly discussed. Citations play an essential role in navigating academic literature and following chains of evidence in research. With the growing availability of large digital archives of scientific papers, the automated extraction and analysis of citations is becoming increasingly relevant. However, existing approaches to citation extraction still fall short of the high accuracy required to build more sophisticated and reliable tools for citation analysis and corpus navigation. In this paper, we present techniques for high accuracy extraction of citations and references from academic papers. By collecting multiple sources of evidence about entities from documents, and integrating citation extraction, reference segmentation, and citation-reference matching, we are able to significantly improve performance in subtasks including citation identification, author named entity recognition, and citation-reference matching. Applying our algorithm to previously-unseen documents, we demonstrate high F-measure performance of 0.980 for citation extraction, 0.983 for author named entity recognition, and 0.948 for citation-reference matching. In this paper, we present the results of a user study on exploratory search activities in a social science digital library. We conducted a user study with 32 participants with a social sciences background—16 postdoctoral researchers and 16 students—who were asked to solve a task on searching related work to a given topic. The exploratory search task was performed in a 10-min time slot. The use of certain search activities is measured and compared to gaze data recorded with an eye tracking device. We use a novel tree graph representation to visualise the users’ search patterns and introduce a way to combine multiple search session trees. The tree graph representation is capable of creating one single tree for multiple users and identifying common search patterns. In addition, the information behaviour of students and postdoctoral researchers is being compared. The results show that search activities on the stratagem level are frequently utilised by both user groups. The most heavily used search activities were keyword search, followed by browsing through references and citations, and author searching. The eye tracking results showed an intense examination of documents metadata, especially on the level of citations and references. When comparing the group of students and postdoctoral researchers, we found significant differences regarding gaze data on the area of the journal name of the seed document. In general, we found a tendency of the postdoctoral researchers to examine the metadata records more intensively with regard to dwell time and the number of fixations. By creating combined session trees and deriving subtrees from those, we were able to identify common patterns like economic (explorative) and exhaustive (navigational) behaviour. Our results show that participants utilised multiple search strategies starting from the seed document, which means that they examined different paths to find related publications. Scientists continue to find challenges in the ever increasing amount of information that has been produced on a world wide scale, during the last decades. When writing a paper, an author searches for the most relevant citations that started or were the foundation of a particular topic, which would very likely explain the thinking or algorithms that are employed. The search is usually done using specific keywords submitted to literature search engines such as Google Scholar and CiteSeer. However, finding relevant citations is distinctive from producing articles that are only topically similar to an author's proposal. In this paper, we address the problem of citation recommendation using a singular value decomposition approach. The models are trained and evaluated on the Citeseer digital library. The results of our experiments show that the proposed approach achieves significant success when compared with collaborative filtering methods on the citation recommendation task. This paper describes a simple method for extracting metadata fields from citations using hidden Markov models. The method is easy to implement and can achieve levels of precision and recall for heterogeneous citations comparable to or greater than other HMM-based methods. The method consists largely of string manipulation and otherwise depends only on an implementation of the Viterbi algorithm, which is widely available, and so can be implemented by diverse digital library systems. Researchers and scientists increasingly find themselves in the position of having to quickly understand large amounts of technical material. Our goal is to effectively serve this need by using bibliometric text mining and summarization techniques to generate summaries of scientific literature. We show how we can use citations to produce automatically generated, readily consumable, technical extractive summaries. We first propose C-LexRank, a model for summarizing single scientific articles based on citations, which employs community detection and extracts salient information-rich sentences. Next, we further extend our experiments to summarize a set of papers, which cover the same scienti fic topic. We generate extractive summaries of a set of Question Answering (QA) and Dependency Parsing (DP) papers, their abstracts, and their citation sentences and show that citations have unique information amenable to creating a summary. Published scientific articles are linked together into a graph, the citation graph, through their citations. This paper explores the notion of similarity based on connectivity alone, and proposes several algorithms to quantify it. Our metrics take advantage of the local neighborhoods of the nodes in the citation graph. Two variants of link-based similarity estimation between two nodes are described, one based on the separate local neighborhoods of the nodes, and another based on the joint local neighborhood expanded from both nodes at the same time. The algorithms are implemented and evaluated on a subgraph of the citation graph of computer science in a retrieval context. The results are compared with text-based similarity, and demonstrate the complementarity of link-based and text-based retrieval. This dissertation investigates the role of contextual information in the automated retrieval and display of full-text documents, using robust natural language processing algorithms to automatically detect structure in and assign topic labels to texts. Many long texts are comprised of complex topic and subtopic structure, a fact ignored by existing information access methods. I present two algorithms which detect such structure, and two visual display paradigms which use the results of these algorithms to show the interactions of multiple main topics, multiple subtopics, and the relations between main topics and subtopics. The first algorithm, called TextTiling , recognizes the subtopic structure of texts as dictated by their content. It uses domain-independent lexical frequency and distribution information to partition texts into multi-paragraph passages. The results are found to correspond well to reader judgments of major subtopic boundaries. The second algorithm assigns multiple main topic labels to each text, where the labels are chosen from pre-defined, intuitive category sets; the algorithm is trained on unlabeled text. A new iconic representation, called TileBars uses TextTiles to simultaneously and compactly display query term frequency, query term distribution and relative document length. This representation provides an informative alternative to ranking long texts according to their overall similarity to a query. For example, a user can choose to view those documents that have an extended discussion of one set of terms and a brief but overlapping discussion of a second set of terms. This representation also allows for relevance feedback on patterns of term distribution. TileBars display documents only in terms of words supplied in the user query. For a given retrieved text, if the query words do not correspond to its main topics, the user cannot discern in what context the query terms were used. For example, a query on contaminants may retrieve documents whose main topics relate to nuclear power, food, or oil spills. To address this issue, I describe a graphical interface, called Cougar , that displays retrieved documents in terms of interactions among their automatically-assigned main topics, thus allowing users to familiarize themselves with the topics and terminology of a text collection. In this paper, we propose a novel image indexing and retrieval algorithm using local tetra patterns (LTrPs) for content-based image retrieval (CBIR). The standard local binary pattern (LBP) and local ternary pattern (LTP) encode the relationship between the referenced pixel and its surrounding neighbors by computing gray-level difference. The proposed method encodes the relationship between the referenced pixel and its neighbors, based on the directions that are calculated using the first-order derivatives in vertical and horizontal directions. In addition, we propose a generic strategy to compute nth-order LTrP using (n - 1)th-order horizontal and vertical derivatives for efficient CBIR and analyze the effectiveness of our proposed algorithm by combining it with the Gabor transform. The performance of the proposed method is compared with the LBP, the local derivative patterns, and the LTP based on the results obtained using benchmark image databases viz., Corel 1000 database (DB1), Brodatz texture database (DB2), and MIT VisTex database (DB3). Performance analysis shows that the proposed method improves the retrieval result from 70.34 44.9 to 75.9 48.7 in terms of average precision average recall on database DB1, and from 79.97 to 85.30 and 82.23 to 90.02 in terms of average retrieval rate on databases DB2 and DB3, respectively, as compared with the standard LBP. Text mining and information retrieval techniques have been developed to assist us with analyzing, organizing and retrieving documents with the help of computers. In many cases, it is desirable that the authors of such documents remain anonymous: Search logs can reveal sensitive details about a user, critical articles or messages about a company or government might have severe or fatal consequences for a critic, and negative feedback in customer surveys might negatively impact business relations if they are identified. Simply removing personally identifying information from a document is, however, insufficient to protect the writer's identity: Given some reference texts of suspect authors, so-called authorship attribution methods can reidentfy the author from the text itself. One of the most prominent models to represent documents in many common text mining and information retrieval tasks is the vector space model where each document is represented as a vector, typically containing its term frequencies or related quantities. We therefore propose an automated text anonymization approach that produces synthetic term frequency vectors for the input documents that can be used in lieu of the original vectors. We evaluate our method on an exemplary text classification task and demonstrate that it only has a low impact on its accuracy. In contrast, we show that our method strongly affects authorship attribution techniques to the level that they become infeasible with a much stronger decline in accuracy. Other than previous authorship obfuscation methods, our approach is the first that fulfills differential privacy and hence comes with a provable plausible deniability guarantee.