Collagen fiber orientations in bones, visible with Second Harmonic Generation (SHG) microscopy, represent the inner structure and its alteration due to influences like cancer. While analyses of these orientations are valuable for medical research, it is not feasible to analyze the needed large amounts of local orientations manually. Since we have uncertain borders for these local orientations only rough regions can be segmented instead of a pixel-wise segmentation. We analyze the effect of these uncertain borders on human performance by a user study. Furthermore, we compare a variety of 2D and 3D methods such as classical approaches like Fourier analysis with state-of-the-art deep neural networks for the classification of local fiber orientations. We present a general way to use pretrained 2D weights in 3D neural networks, such as Inception-ResNet-3D a 3D extension of Inception-ResNet-v2. In a 10 fold cross-validation our two stage segmentation based on Inception-ResNet-3D and transferred 2D ImageNet weights achieves a human comparable accuracy.
While 3D extensions of Inception-ResNet-v2 have been presented in @cite_2 @cite_22 the usage of 2D pretraining is not so widely used. Parallel to our research proposed a 2D weight transfer strategy to 3D @cite_17 which is most similar to ours (see subsec:weight ).
@cite_17 @cite_22 @cite_2
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This paper presents incremental network quantization (INQ), a novel method, targeting to efficiently convert any pre-trained full-precision convolutional neural network (CNN) model into a low-precision version whose weights are constrained to be either powers of two or zero. Unlike existing methods which are struggled in noticeable accuracy loss, our INQ has the potential to resolve this issue, as benefiting from two innovations. On one hand, we introduce three interdependent operations, namely weight partition, group-wise quantization and re-training. A well-proven measure is employed to divide the weights in each layer of a pre-trained CNN model into two disjoint groups. The weights in the first group are responsible to form a low-precision base, thus they are quantized by a variable-length encoding method. The weights in the other group are responsible to compensate for the accuracy loss from the quantization, thus they are the ones to be re-trained. On the other hand, these three operations are repeated on the latest re-trained group in an iterative manner until all the weights are converted into low-precision ones, acting as an incremental network quantization and accuracy enhancement procedure. Extensive experiments on the ImageNet classification task using almost all known deep CNN architectures including AlexNet, VGG-16, GoogleNet and ResNets well testify the efficacy of the proposed method. Specifically, at 5-bit quantization (a variable-length encoding: 1 bit for representing zero value, and the remaining 4 bits represent at most 16 different values for the powers of two), our models have improved accuracy than the 32-bit floating-point references. Taking ResNet-18 as an example, we further show that our quantized models with 4-bit, 3-bit and 2-bit ternary weights have improved or very similar accuracy against its 32-bit floating-point baseline. Besides, impressive results with the combination of network pruning and INQ are also reported. We believe that our method sheds new insights on how to make deep CNNs to be applicable on mobile or embedded devices. The code will be made publicly available. The purpose of this study is to determine whether current video datasets have sufficient data for training very deep convolutional neural networks (CNNs) with spatio-temporal three-dimensional (3D) kernels. Recently, the performance levels of 3D CNNs in the field of action recognition have improved significantly. However, to date, conventional research has only explored relatively shallow 3D architectures. We examine the architectures of various 3D CNNs from relatively shallow to very deep ones on current video datasets. Based on the results of those experiments, the following conclusions could be obtained: (i) ResNet-18 training resulted in significant overfitting for UCF-101, HMDB-51, and ActivityNet but not for Kinetics. (ii) The Kinetics dataset has sufficient data for training of deep 3D CNNs, and enables training of up to 152 ResNets layers, interestingly similar to 2D ResNets on ImageNet. ResNeXt-101 achieved 78.4 average accuracy on the Kinetics test set. (iii) Kinetics pretrained simple 3D architectures outperforms complex 2D architectures, and the pretrained ResNeXt-101 achieved 94.5 and 70.2 on UCF-101 and HMDB-51, respectively. The use of 2D CNNs trained on ImageNet has produced significant progress in various tasks in image. We believe that using deep 3D CNNs together with Kinetics will retrace the successful history of 2D CNNs and ImageNet, and stimulate advances in computer vision for videos. The codes and pretrained models used in this study are publicly available1. The purpose of this study is to determine whether current video datasets have sufficient data for training very deep convolutional neural networks (CNNs) with spatio-temporal three-dimensional (3D) kernels. Recently, the performance levels of 3D CNNs in the field of action recognition have improved significantly. However, to date, conventional research has only explored relatively shallow3Darchitectures. We examine the architectures of various 3D CNNs from relatively shallow to very deep ones on current video datasets. Based on the results of those experiments, the following conclusions could be obtained: (i) ResNet-18 training resulted in significant overfitting for UCF-101, HMDB-51, and ActivityNet but not for Kinetics. (ii) The Kinetics dataset has sufficient data for training of deep 3D CNNs, and enables training of up to 152 ResNets layers, interestingly similar to 2D ResNets on ImageNet. (iii) Kinetics pretrained simple 3D architectures outperforms complex2D architectures, and the pretrained ResNeXt-101 achieved 94.5 and 70.2 on UCF-101 and HMDB-51, respectively. The use of 2D CNNs trained on ImageNet has produced significant progress in various tasks in image. We believe that using deep 3D CNNs together with Kinetics will retrace the successful history of 2D CNNs and ImageNet, and stimulate advances in computer vision for videos. The codes and pretrained models used in this study are publicly available. We introduce techniques for rapidly transferring the information stored in one neural net into another neural net. The main purpose is to accelerate the training of a significantly larger neural net. During real-world workflows, one often trains very many different neural networks during the experimentation and design process. This is a wasteful process in which each new model is trained from scratch. Our Net2Net technique accelerates the experimentation process by instantaneously transferring the knowledge from a previous network to each new deeper or wider network. Our techniques are based on the concept of function-preserving transformations between neural network specifications. This differs from previous approaches to pre-training that altered the function represented by a neural net when adding layers to it. Using our knowledge transfer mechanism to add depth to Inception modules, we demonstrate a new state of the art accuracy rating on the ImageNet dataset.