We develop a Bayesian nonparametric model for reconstructing magnetic resonance images (MRIs) from highly undersampled (k ) -space data. We perform dictionary learning as part of the image reconstruction process. To this end, we use the beta process as a nonparametric dictionary learning prior for representing an image patch as a sparse combination of dictionary elements. The size of the dictionary and patch-specific sparsity pattern are inferred from the data, in addition to other dictionary learning variables. Dictionary learning is performed directly on the compressed image, and so is tailored to the MRI being considered. In addition, we investigate a total variation penalty term in combination with the dictionary learning model, and show how the denoising property of dictionary learning removes dependence on regularization parameters in the noisy setting. We derive a stochastic optimization algorithm based on Markov chain Monte Carlo for the Bayesian model, and use the alternating direction method of multipliers for efficiently performing total variation minimization. We present empirical results on several MRI, which show that the proposed regularization framework can improve reconstruction accuracy over other methods.
We use the following notation: Let @math be a @math MR image in vectorized form. Let @math , @math , be the undersampled Fourier encoding matrix and @math represent the sub-sampled set of @math -space measurements. The goal is to estimate @math from the small fraction of @math -space measurements @math . For dictionary learning, let @math be the @math th patch extraction matrix. That is, @math is a @math matrix of all zeros except for a one in each row that extracts a vectorized @math patch from the image, @math for @math . We work with overlapping image patches with a shift of one pixel and allow a patch to wrap around the image at the boundaries for mathematical convenience @cite_16 @cite_35 .
@cite_35 @cite_16
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Consider the problem of recovering an unknown signal from undersampled measurements, given the knowledge that the signal has a sparse representation in a specified dictionary @math . This problem is now understood to be well-posed and efficiently solvable under suitable assumptions on the measurements and dictionary if the number of measurements scales roughly with the sparsity level. One sufficient condition for such is the @math -restricted isometry property ( @math -RIP), which asks that the sampling matrix approximately preserve the norm of all signals which are sufficiently sparse in @math . While many classes of random matrices are known to satisfy such conditions, such matrices are not representative of the structural constraints imposed by practical sensing systems. We close this gap in the theory by demonstrating that one can subsample a fixed orthogonal matrix in such a way that the @math -RIP will hold, provided this basis is sufficiently incoherent with the sparsifying dictionary $ ... We study the recovery of sparse vectors from subsampled random convolutions via @math -minimization. We consider the setup in which both the subsampling locations as well as the generating vector are chosen at random. For a subgaussian generator with independent entries, we improve previously known estimates: if the sparsity @math is small enough, i.e., @math , we show that @math measurements are sufficient to recover @math -sparse vectors in dimension @math with high probability, matching the well-known condition for recovery from standard Gaussian measurements. If @math is larger, then essentially @math measurements are sufficient, again improving over previous estimates. Our results are shown via the so-called robust null space property which is weaker than the standard restricted isometry property. Our method of proof involves a novel combination of small ball estimates with chaining techniques which should be of independent interest. Let @math be an @math Fourier matrix over @math for some prime @math . We improve upon known lower bounds for the number of rows of @math that must be sampled so that the resulting matrix @math satisfies the restricted isometry property for @math -sparse vectors. This property states that @math is approximately @math for all @math -sparse vectors @math . In particular, if @math , we show that @math rows must be sampled to satisfy the restricted isometry property with constant probability. We give efficient algorithms for volume sampling, i.e., for picking @math -subsets of the rows of any given matrix with probabilities proportional to the squared volumes of the simplices defined by them and the origin (or the squared volumes of the parallelepipeds defined by these subsets of rows). In other words, we can efficiently sample @math -subsets of @math with probabilities proportional to the corresponding @math by @math principal minors of any given @math by @math positive semi definite matrix. This solves an open problem from the monograph on spectral algorithms by Kannan and Vempala (see Section @math of KV , also implicit in BDM, DRVW ). Our first algorithm for volume sampling @math -subsets of rows from an @math -by- @math matrix runs in @math arithmetic operations (where @math is the exponent of matrix multiplication) and a second variant of it for @math -approximate volume sampling runs in @math arithmetic operations, which is almost linear in the size of the input (i.e., the number of entries) for small @math . Our efficient volume sampling algorithms imply the following results for low-rank matrix approximation: (1) Given @math , in @math arithmetic operations we can find @math of its rows such that projecting onto their span gives a @math -approximation to the matrix of rank @math closest to @math under the Frobenius norm. This improves the @math -approximation of Boutsidis, Drineas and Mahoney BDM and matches the lower bound shown in DRVW . The method of conditional expectations gives a algorithm with the same complexity. The running time can be improved to @math at the cost of losing an extra @math in the approximation factor. (2) The same rows and projection as in the previous point give a @math -approximation to the matrix of rank @math closest to @math under the spectral norm. In this paper, we show an almost matching lower bound of @math , even for @math .