Deep learning models such as convolutional neural net- work have been widely used in 3D biomedical segmentation and achieve state-of-the-art performance. However, most of them often adapt a single modality or stack multiple modalities as different input channels. To better leverage the multi- modalities, we propose a deep encoder-decoder structure with cross-modality convolution layers to incorporate different modalities of MRI data. In addition, we exploit convolutional LSTM to model a sequence of 2D slices, and jointly learn the multi-modalities and convolutional LSTM in an end-to-end manner. To avoid converging to the certain labels, we adopt a re-weighting scheme and two-phase training to handle the label imbalance. Experimental results on BRATS-2015 show that our method outperforms state-of-the-art biomedical segmentation approaches.
Existing CNN-based methods (e.g., @cite_3 @cite_10 ) often treat modalities as different channels in the input data. However, the correlations between them are not well utilized. To our best knowledge, we are the first to jointly exploit the correlations between different modalities, and the spatial and sequential dependencies for consecutive slices.
@cite_10 @cite_3
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Convolutional neural network (CNN), which comprises one or more convolutional and pooling layers followed by one or more fully-connected layers, has gained popularity due to its ability to learn fruitful representations from images or speeches, capturing local dependency and slight-distortion invariance. CNN has recently been applied to the problem of activity recognition, where 1D kernels are applied to capture local dependency over time in a series of observations measured at inertial sensors (3-axis accelerometers and gyroscopes). In this paper we present a multi-modal CNN where we use 2D kernels in both convolutional and pooling layers, to capture local dependency over time as well as spatial dependency over sensors. Experiments on benchmark datasets demonstrate the high performance of our multi-modal CNN, compared to several state of the art methods. In this paper, we describe a novel deep convolutional neural network (CNN) that is deeper and wider than other existing deep networks for hyperspectral image classification. Unlike current state-of-the-art approaches in CNN-based hyperspectral image classification, the proposed network, called contextual deep CNN, can optimally explore local contextual interactions by jointly exploiting local spatio-spectral relationships of neighboring individual pixel vectors. The joint exploitation of the spatio-spectral information is achieved by a multi-scale convolutional filter bank used as an initial component of the proposed CNN pipeline. The initial spatial and spectral feature maps obtained from the multi-scale filter bank are then combined together to form a joint spatio-spectral feature map. The joint feature map representing rich spectral and spatial properties of the hyperspectral image is then fed through a fully convolutional network that eventually predicts the corresponding label of each pixel vector. The proposed approach is tested on three benchmark data sets: the Indian Pines data set, the Salinas data set, and the University of Pavia data set. Performance comparison shows enhanced classification performance of the proposed approach over the current state-of-the-art on the three data sets. The performance of single image super-resolution has achieved significant improvement by utilizing deep convolutional neural networks (CNNs). The features in deep CNN contain different types of information which make different contributions to image reconstruction. However, most CNN-based models lack discriminative ability for different types of information and deal with them equally, which results in the representational capacity of the models being limited. On the other hand, as the depth of neural networks grows, the long-term information coming from preceding layers is easy to be weaken or lost in late layers, which is adverse to super-resolving image. To capture more informative features and maintain long-term information for image super-resolution, we propose a channel-wise and spatial feature modulation (CSFM) network in which a sequence of feature-modulation memory (FMM) modules is cascaded with a densely connected structure to transform low-resolution features to high informative features. In each FMM module, we construct a set of channel-wise and spatial attention residual (CSAR) blocks and stack them in a chain structure to dynamically modulate multi-level features in a global-and-local manner. This feature modulation strategy enables the high contribution information to be enhanced and the redundant information to be suppressed. Meanwhile, for long-term information persistence, a gated fusion (GF) node is attached at the end of the FMM module to adaptively fuse hierarchical features and distill more effective information via the dense skip connections and the gating mechanism. Extensive quantitative and qualitative evaluations on benchmark datasets illustrate the superiority of our proposed method over the state-of-the-art methods. Deep convolutional neural networks (CNNs) have become a key element in the recent breakthrough of salient object detection. However, existing CNN-based methods are based on either patchwise (regionwise) training and inference or fully convolutional networks. Methods in the former category are generally time-consuming due to severe storage and computational redundancies among overlapping patches. To overcome this deficiency, methods in the second category attempt to directly map a raw input image to a predicted dense saliency map in a single network forward pass. Though being very efficient, it is arduous for these methods to detect salient objects of different scales or salient regions with weak semantic information. In this paper, we develop hybrid contrast-oriented deep neural networks to overcome the aforementioned limitations. Each of our deep networks is composed of two complementary components, including a fully convolutional stream for dense prediction and a segment-level spatial pooling stream for sparse saliency inference. We further propose an attentional module that learns weight maps for fusing the two saliency predictions from these two streams. A tailored alternate scheme is designed to train these deep networks by fine-tuning pretrained baseline models. Finally, a customized fully connected conditional random field model incorporating a salient contour feature embedding can be optionally applied as a postprocessing step to improve spatial coherence and contour positioning in the fused result from these two streams. Extensive experiments on six benchmark data sets demonstrate that our proposed model can significantly outperform the state of the art in terms of all popular evaluation metrics.