Networks have been a general tool for representing, analyzing, and modeling relational data arising in several domains. One of the most important aspect of network analysis is community detection or network clustering. Until recently, the major focus have been on discovering community structure in single (i.e., monoplex) networks. However, with the advent of relational data with multiple modalities, multiplex networks, i.e., networks composed of multiple layers representing different aspects of relations, have emerged. Consequently, community detection in multiplex network, i.e., detecting clusters of nodes shared by all layers, has become a new challenge. In this paper, we propose Network Fusion for Composite Community Extraction (NF-CCE), a new class of algorithms, based on four different non-negative matrix factorization models, capable of extracting composite communities in multiplex networks. Each algorithm works in two steps: first, it finds a non-negative, low-dimensional feature representation of each network layer; then, it fuses the feature representation of layers into a common non-negative, low-dimensional feature representation via collective factorization. The composite clusters are extracted from the common feature representation. We demonstrate the superior performance of our algorithms over the state-of-the-art methods on various types of multiplex networks, including biological, social, economic, citation, phone communication, and brain multiplex networks.
aims to group nodes into partitions such that the cut size , i.e., the total number of edges between any two partitions, is minimal. Two widely used graph partitioning algorithms that also take into account the size of partitions are Ratio Cut and Normalized Cut @cite_42 . Graph partitioning algorithms can be alternatively defined as spectral algorithms in which the objective is to partition the nodes into communities based on their eigenvectors obtained from eigendecomposition of graph Laplacian matrix @cite_36 .
@cite_36 @cite_42
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This paper presents a new spectral partitioning formulation which directly incorporates vertex size information by modifying the Laplacian of the graph. Modifying the Laplacian produces a generalized eigenvalue problem, which is reduced to the standard eigenvalue problem. Experiments show that the scaled ratio-cut costs of results on benchmarks with arbitrary vertex size improve by 22 when the eigenvectors of the Laplacian in the spectral partitioner KP are replaced by the eigenvectors of our modified Laplacian. The inability to handle vertex sizes in the spectral partitioning formulation has been a limitation in applying spectral partitioning in a multilevel setting. We investigate whether our new formulation effectively removes this limitation by combining it with a simple multilevel bottom-up clustering algorithm and an iterative improvement algorithm for partition refinement. Experiments show that in a multilevel setting where the spectral partitioner KP provides the initial partitions of the most contracted graph, using the modified Laplacian in place of the standard Laplacian is more efficient and more effective in the partitioning of graphs with arbitrary-size and unit-size vertices; average improvements of 17 and 18 are observed for graphs with arbitrary-size and unit-size vertices, respectively. Comparisons with other ratio-cut based partitioners on hypergraphs with unit-size as well as arbitrary-size vertices, show that the multilevel spectral partitioner produces either better results or almost identical results more efficiently. Let (G) be the minimum conductance of an undirected graph G, and let 0= = 2, (G) = O(k) , and this performance guarantee is achieved by the spectral partitioning algorithm. This improves Cheeger's inequality, and the bound is optimal up to a constant factor for any k. Our result shows that the spectral partitioning algorithm is a constant factor approximation algorithm for finding a sparse cut if $ is a constant for some constant k. This provides some theoretical justification to its empirical performance in image segmentation and clustering problems. We extend the analysis to other graph partitioning problems, including multi-way partition, balanced separator, and maximum cut. The graph partitioning problem is to divide the vertices of a graph into disjoint clusters to minimize the total cost of the edges cut by the clusters. A spectral partitioning heuristic uses the graph's eigenvectors to construct a geometric representation of the graph (e.g., linear orderings) which are subsequently partitioned. Our main result shows that when all the eigenvectors are used, graph partitioning reduces to a new vector partitioning problem. This result implies that as many eigenvectors as are practically possible should be used to construct a solution. This philosophy is in contrast to that of the widely used spectral bipartitioning (SB) heuristic (which uses only a single eigenvector) and several previous multi-way partitioning heuristics [8, 11, 17, 27, 38] (which use k eigenvectors to construct k-way partitionings). Our result motivates a simple ordering heuristic that is a multiple-eigenvector extension of SB. This heuristic not only significantly outperforms recursive SB, but can also yield excellent multi-way VLSI circuit partitionings as compared to [1, 11]. Our experiments suggest that the vector partitioning perspective opens the door to new and effective partitioning heuristics. The present paper updates and improves a preliminary version of this work [5]. We present a novel approach to graph partitioning based on the notion of . Our algorithm, called PUNCH, has two phases. The first phase performs a series of minimum-cut computations to identify and contract dense regions of the graph. This reduces the graph size, but preserves its general structure. The second phase uses a combination of greedy and local search heuristics to assemble the final partition. The algorithm performs especially well on road networks, which have an abundance of natural cuts (such as bridges, mountain passes, and ferries). In a few minutes, it obtains the best known partitions for continental-sized networks, significantly improving on previous results.