Geodesic distance is the shortest path between two points in a Riemannian manifold. Manifold learning algorithms, such as Isomap, seek to learn a manifold that preserves geodesic distances. However, such methods operate on the ambient dimensionality, and are therefore fragile to noise dimensions. We developed an unsupervised random forest method (URerF) to approximately learn geodesic distances in linear and nonlinear manifolds with noise. URerF operates on low-dimensional sparse linear combinations of features, rather than the full observed dimensionality. To choose the optimal split in a computationally efficient fashion, we developed a fast Bayesian Information Criterion statistic for Gaussian mixture models. We introduce geodesic precision-recall curves which quantify performance relative to the true latent manifold. Empirical results on simulated and real data demonstrate that URerF is robust to high-dimensional noise, where as other methods, such as Isomap, UMAP, and FLANN, quickly deteriorate in such settings. In particular, URerF is able to estimate geodesic distances on a real connectome dataset better than other approaches.
Nonlinear manifold learning approaches, such as Isomap @cite_18 , Laplacian eigenmaps @cite_0 and UMAP @cite_19 , are designed to preserve geodesic distances, and even directly estimate them. Specifically, they follow a three-step process. First, they estimate geodesic distances in the original manifold. This is done by initially constructing a @math -nearest neighbor or @math -neighborhood graph in which the observations (data points) correspond to nodes, and pairwise Euclidean distances between these points correspond to the weights on the edges. Second, the all-pairs shortest paths of the nodes in the graph are computed. Third, the points are embedded in a lower dimensional space that ideally preserves these distances. This approach is significantly hampered by the first step, which operates in the original high-dimensional ambient space, since Euclidean distances often fail to provide good estimates of distances on the manifold. Moreover, given @math datapoints, computing all pairwise distances is @math space and time, and all pairwise shortest paths can require @math , both of which can be cost prohibitive for large sample sizes.
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Numerous methods or algorithms have been designed to solve the problem of nonlinear dimensionality reduction (NLDR). However, very few among them are able to embed efficiently 'circular' manifolds like cylinders or tori, which have one or more essential loops. This paper presents a simple and fast procedure that can tear or cut those manifolds, i.e. break their essential loops, in order to make their embedding in a low-dimensional space easier. The key idea is the following: starting from the available data points, the tearing procedure represents the underlying manifold by a graph and then builds a maximum subgraph with no loops anymore. Because it works with a graph, the procedure can preprocess data for all NLDR techniques that uses the same representation. Recent techniques using geodesic distances (Isomap, geodesic Sammon's mapping, geodesic CCA, etc.) or K-ary neighborhoods (LLE, hLLE, Laplacian eigenmaps) fall in that category. After describing the tearing procedure in details, the paper comments a few experimental results. (c) 2005 Elsevier B.V. All rights reserved. Previous efforts in hashing intend to preserve data variance or pairwise affinity, but neither is adequate in capturing the manifold structures hidden in most visual data. In this paper, we tackle this problem by reconstructing the locally linear structures of manifolds in the binary Hamming space, which can be learned by locality-sensitive sparse coding. We cast the problem as a joint minimization of reconstruction error and quantization loss, and show that, despite its NP-hardness, a local optimum can be obtained efficiently via alternative optimization. Our method distinguishes itself from existing methods in its remarkable ability to extract the nearest neighbors of the query from the same manifold, instead of from the ambient space. On extensive experiments on various image benchmarks, our results improve previous state-of-the-art by 28-74 typically, and 627 on the Yale face data. We consider semi-supervised regression when the predictor variables are drawn from an unknown manifold. A simple two step approach to this problem is to: (i) estimate the manifold geodesic distance between any pair of points using both the labeled and unlabeled instances; and (ii) apply a k nearest neighbor regressor based on these distance estimates. We prove that given sufficiently many unlabeled points, this simple method of geodesic kNN regression achieves the optimal finite-sample minimax bound on the mean squared error, as if the manifold were known. Furthermore, we show how this approach can be efficiently implemented, requiring only O(k N log N) operations to estimate the regression function at all N labeled and unlabeled points. We illustrate this approach on two datasets with a manifold structure: indoor localization using WiFi fingerprints and facial pose estimation. In both cases, geodesic kNN is more accurate and much faster than the popular Laplacian eigenvector regressor. We propose a novel approach for optical flow estimation, targeted at large displacements with significant occlusions. It consists of two steps: i) dense matching by edge-preserving interpolation from a sparse set of matches; ii) variational energy minimization initialized with the dense matches. The sparse-to-dense interpolation relies on an appropriate choice of the distance, namely an edge-aware geodesic distance. This distance is tailored to handle occlusions and motion boundaries - two common and difficult issues for optical flow computation. We also propose an approximation scheme for the geodesic distance to allow fast computation without loss of performance. Subsequent to the dense interpolation step, standard one-level variational energy minimization is carried out on the dense matches to obtain the final flow estimation. The proposed approach, called Edge-Preserving Interpolation of Correspondences (EpicFlow) is fast and robust to large displacements. It significantly outperforms the state of the art on MPI-Sintel and performs on par on Kitti and Middlebury.