Deep learning models such as convolutional neural net- work have been widely used in 3D biomedical segmentation and achieve state-of-the-art performance. However, most of them often adapt a single modality or stack multiple modalities as different input channels. To better leverage the multi- modalities, we propose a deep encoder-decoder structure with cross-modality convolution layers to incorporate different modalities of MRI data. In addition, we exploit convolutional LSTM to model a sequence of 2D slices, and jointly learn the multi-modalities and convolutional LSTM in an end-to-end manner. To avoid converging to the certain labels, we adopt a re-weighting scheme and two-phase training to handle the label imbalance. Experimental results on BRATS-2015 show that our method outperforms state-of-the-art biomedical segmentation approaches.
Image Semantic Segmentation. Various deep methods have been developed and achieve significant progress in image segmentation @cite_17 @cite_5 @cite_1 @cite_2 . These methods use convolution neural network (CNN) to extract deep representations and up-sample the low-resolution feature maps to produce the dense prediction results. SegNet @cite_8 adopts an encoder-decoder structure to further improve the performance while requiring fewer model parameters. We adopt the encoder-decoder structure for 3D biomedical segmentation and further incorporate cross-modality convolution and convolutional LSTM to better exploit the multi-modal data and sequential information for consecutive slices.
@cite_8 @cite_1 @cite_2 @cite_5 @cite_17
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In this paper we address the problem of semantic labeling of indoor scenes on RGB-D data. With the availability of RGB-D cameras, it is expected that additional depth measurement will improve the accuracy. Here we investigate a solution how to incorporate complementary depth information into a semantic segmentation framework by making use of convolutional neural networks (CNNs). Recently encoder-decoder type fully convolutional CNN architectures have achieved a great success in the field of semantic segmentation. Motivated by this observation we propose an encoder-decoder type network, where the encoder part is composed of two branches of networks that simultaneously extract features from RGB and depth images and fuse depth features into the RGB feature maps as the network goes deeper. Comprehensive experimental evaluations demonstrate that the proposed fusion-based architecture achieves competitive results with the state-of-the-art methods on the challenging SUN RGB-D benchmark obtaining 76.27 global accuracy, 48.30 average class accuracy and 37.29 average intersection-over-union score. We present a novel and practical deep fully convolutional neural network architecture for semantic pixel-wise segmentation termed SegNet. This core trainable segmentation engine consists of an encoder network, a corresponding decoder network followed by a pixel-wise classification layer. The architecture of the encoder network is topologically identical to the 13 convolutional layers in the VGG16 network [1] . The role of the decoder network is to map the low resolution encoder feature maps to full input resolution feature maps for pixel-wise classification. The novelty of SegNet lies is in the manner in which the decoder upsamples its lower resolution input feature map(s). Specifically, the decoder uses pooling indices computed in the max-pooling step of the corresponding encoder to perform non-linear upsampling. This eliminates the need for learning to upsample. The upsampled maps are sparse and are then convolved with trainable filters to produce dense feature maps. We compare our proposed architecture with the widely adopted FCN [2] and also with the well known DeepLab-LargeFOV [3] , DeconvNet [4] architectures. This comparison reveals the memory versus accuracy trade-off involved in achieving good segmentation performance. SegNet was primarily motivated by scene understanding applications. Hence, it is designed to be efficient both in terms of memory and computational time during inference. It is also significantly smaller in the number of trainable parameters than other competing architectures and can be trained end-to-end using stochastic gradient descent. We also performed a controlled benchmark of SegNet and other architectures on both road scenes and SUN RGB-D indoor scene segmentation tasks. These quantitative assessments show that SegNet provides good performance with competitive inference time and most efficient inference memory-wise as compared to other architectures. We also provide a Caffe implementation of SegNet and a web demo at http: mi.eng.cam.ac.uk projects segnet . Deep convolutional neural networks (CNNs) have been immensely successful in many high-level computer vision tasks given large labelled datasets. However, for video semantic object segmentation, a domain where labels are scarce, effectively exploiting the representation power of CNN with limited training data remains a challenge. Simply borrowing the existing pre-trained CNN image recognition model for video segmentation task can severely hurt performance. We propose a semi-supervised approach to adapting CNN image recognition model trained from labelled image data to the target domain exploiting both semantic evidence learned from CNN, and the intrinsic structures of video data. By explicitly modelling and compensating for the domain shift from the source domain to the target domain, this proposed approach underpins a robust semantic object segmentation method against the changes in appearance, shape and occlusion in natural videos. We present extensive experiments on challenging datasets that demonstrate the superior performance of our approach compared with the state-of-the-art methods. Deep convolutional neural networks (CNNs) have been immensely successful in many high-level computer vision tasks given large labeled datasets. However, for video semantic object segmentation, a domain where labels are scarce, effectively exploiting the representation power of CNN with limited training data remains a challenge. Simply borrowing the existing pretrained CNN image recognition model for video segmentation task can severely hurt performance. We propose a semi-supervised approach to adapting CNN image recognition model trained from labeled image data to the target domain exploiting both semantic evidence learned from CNN, and the intrinsic structures of video data. By explicitly modeling and compensating for the domain shift from the source domain to the target domain, this proposed approach underpins a robust semantic object segmentation method against the changes in appearance, shape and occlusion in natural videos. We present extensive experiments on challenging datasets that demonstrate the superior performance of our approach compared with the state-of-the-art methods.