Relation extraction (RE) is an indispensable information extraction task in several disciplines. RE models typically assume that named entity recognition (NER) is already performed in a previous step by another independent model. Several recent efforts, under the theme of end-to-end RE, seek to exploit inter-task correlations by modeling both NER and RE tasks jointly. Earlier work in this area commonly reduces the task to a table-filling problem wherein an additional expensive decoding step involving beam search is applied to obtain globally consistent cell labels. In efforts that do not employ table-filling, global optimization in the form of CRFs with Viterbi decoding for the NER component is still necessary for competitive performance. We introduce a novel neural architecture utilizing the table structure, based on repeated applications of 2D convolutions for pooling local dependency and metric-based features, that improves on the state-of-the-art without the need for global optimization. We validate our model on the ADE and CoNLL04 datasets for end-to-end RE and demonstrate @math gain (in F-score) over prior best results with training and testing times that are seven to ten times faster --- the latter highly advantageous for time-sensitive end user applications.
Other recent approaches not utilizing a table structure involve modeling the entity and relation extraction task jointly with shared parameters @cite_9 @cite_24 @cite_5 @cite_0 @cite_3 @cite_26 @cite_10 . katiyar2017going and bekoulis2018join specifically use attention mechanisms for the RE component without the need for dependency parse features. zheng2017joint_tag operate by reducing the problem to a sequence-labeling task that relies on a novel tagging scheme. zeng2018extracting use an encoder-decoder network such that the input sentence is encoded as fixed-length vector and decoded to relation triples directly. Most recently, bekoulis2018adversarial found that adversarial training (AT) is an effective regularization approach for performance.
@cite_26 @cite_9 @cite_3 @cite_24 @cite_0 @cite_5 @cite_10
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We present an incremental joint framework to simultaneously extract entity mentions and relations using structured perceptron with efficient beam-search. A segment-based decoder based on the idea of semi-Markov chain is adopted to the new framework as opposed to traditional token-based tagging. In addition, by virtue of the inexact search, we developed a number of new and effective global features as soft constraints to capture the interdependency among entity mentions and relations. Experiments on Automatic Content Extraction (ACE) 1 corpora demonstrate that our joint model significantly outperforms a strong pipelined baseline, which attains better performance than the best-reported end-to-end system. The wealth of interaction information provided in biomedical articles motivated the implementation of text mining approaches to automatically extract biomedical relations. This paper presents an unsupervised method based on pattern clustering and sentence parsing to deal with biomedical relation extraction. Pattern clustering algorithm is based on Polynomial Kernel method, which identifies interaction words from unlabeled data; these interaction words are then used in relation extraction between entity pairs. Dependency parsing and phrase structure parsing are combined for relation extraction. Based on the semi-supervised KNN algorithm, we extend the proposed unsupervised approach to a semi-supervised approach by combining pattern clustering, dependency parsing and phrase structure parsing rules. We evaluated the approaches on two different tasks: (1) Protein–protein interactions extraction, and (2) Gene–suicide association extraction. The evaluation of task (1) on the benchmark dataset (AImed corpus) showed that our proposed unsupervised approach outperformed three supervised methods. The three supervised methods are rule based, SVM based, and Kernel based separately. The proposed semi-supervised approach is superior to the existing semi-supervised methods. The evaluation on gene–suicide association extraction on a smaller dataset from Genetic Association Database and a larger dataset from publicly available PubMed showed that the proposed unsupervised and semi-supervised methods achieved much higher F-scores than co-occurrence based method. We present a novel approach to relation extraction that integrates information across documents, performs global inference and requires no labelled text. In particular, we tackle relation extraction and entity identification jointly. We use distant supervision to train a factor graph model for relation extraction based on an existing knowledge base (Freebase, derived in parts from Wikipedia). For inference we run an efficient Gibbs sampler that leads to linear time joint inference. We evaluate our approach both for an indomain (Wikipedia) and a more realistic out-of-domain (New York Times Corpus) setting. For the in-domain setting, our joint model leads to 4 higher precision than an isolated local approach, but has no advantage over a pipeline. For the out-of-domain data, we benefit strongly from joint modelling, and observe improvements in precision of 13 over the pipeline, and 15 over the isolated baseline. © 2013 Association for Computational Linguistics. Traditional relation extraction predicts relations within some fixed and finite target schema. Machine learning approaches to this task require either manual annotation or, in the case of distant supervision, existing structured sources of the same schema. The need for existing datasets can be avoided by using a universal schema: the union of all involved schemas (surface form predicates as in OpenIE, and relations in the schemas of preexisting databases). This schema has an almost unlimited set of relations (due to surface forms), and supports integration with existing structured data (through the relation types of existing databases). To populate a database of such schema we present matrix factorization models that learn latent feature vectors for entity tuples and relations. We show that such latent models achieve substantially higher accuracy than a traditional classification approach. More importantly, by operating simultaneously on relations observed in text and in pre-existing structured DBs such as Freebase, we are able to reason about unstructured and structured data in mutually-supporting ways. By doing so our approach outperforms stateof- the-Art distant supervision.