Understanding large amounts of spatiotemporal data from particle-based simulations, such as molecular dynamics, often relies on the computation and analysis of aggregate measures. These, however, by virtue of aggregation, hide structural information about the space time localization of the studied phenomena. This leads to degenerate cases where the measures fail to capture distinct behaviour. In order to drill into these aggregate values, we propose a multi-scale visual exploration technique. Our novel representation, based on partial domain aggregation, enables the construction of a continuous scale-space for discrete datasets and the simultaneous exploration of scales in both space and time. We link these two scale-spaces in a scale-space space-time cube and model linked views as orthogonal slices through this cube, thus enabling the rapid identification of spatio-temporal patterns at multiple scales. To demonstrate the effectiveness of our approach, we showcase an advanced exploration of a protein-ligand simulation.
Our approach is based on the concept of the space-time cube, coined by H "a gerstrand @cite_16 in 1970. Since then it was repeatedly used, either explicitly or as an underlying concept. Recently, @cite_35 presented a useful overview of related techniques. They describe the theoretical concept of a generalized space-time cube together with a taxonomy of all elementary space-time operations and their combinations that can be performed on such a space-time cube. A more abstract approach to time-dependent volume data analysis has been proposed by @cite_41 , based on hyperplane slicing of a four-dimensional space-time hypercube. Other examples of slicing higher-dimensional data (not necessarily time dependent) include Sliceplorer @cite_0 , Hyperslice @cite_19 , Hypersliceplorer @cite_26 and HyperMoVal @cite_27 .
@cite_35 @cite_26 @cite_41 @cite_0 @cite_19 @cite_27 @cite_16
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We present the generalized space-time cube, a descriptive model for visualizations of temporal data. Visualizations are described as operations on the cube, which transform the cube's 3D shape into readable 2D visualizations. Operations include extracting subparts of the cube, flattening it across space or time or transforming the cubes geometry and content. We introduce a taxonomy of elementary space-time cube operations and explain how these operations can be combined and parameterized. The generalized space-time cube has two properties: 1 it is purely conceptual without the need to be implemented, and 2 it applies to all datasets that can be represented in two dimensions plus time e.g. geo-spatial, videos, networks, multivariate data. The proper choice of space-time cube operations depends on many factors, for example, density or sparsity of a cube. Hence, we propose a characterization of structures within space-time cubes, which allows us to discuss strengths and limitations of operations. We finally review interactive systems that support multiple operations, allowing a user to customize his view on the data. With this framework, we hope to facilitate the description, criticism and comparison of temporal data visualizations, as well as encourage the exploration of new techniques and systems. This paper is an extension of﾿Bach et﾿al.'s 2014 work. We introduce a volumetric space-time technique for the reconstruction of moving and deforming objects from point data. The output of our method is a four-dimensional space-time solid, made up of spatial slices, each of which is a three-dimensional solid bounded by a watertight manifold. The motion of the object is described as an incompressible flow of material through time. We optimize the flow so that the distance material moves from one time frame to the next is bounded, the density of material remains constant, and the object remains compact. This formulation overcomes deficiencies in the acquired data, such as persistent occlusions, errors, and missing frames. We demonstrate the performance of our flow-based technique by reconstructing coherent sequences of watertight models from incomplete scanner data. We present an alternative method for viewing time-varying volumetric data. We consider such data as a four-dimensional data field, rather than considering space and time as separate entities. If we treat the data in this manner, we can apply high dimensional slicing and projection techniques to generate an image hyperplane. The user is provided with an intuitive user interface to specify arbitrary hyperplanes in 4D, which can be displayed with standard volume rendering techniques. From the volume specification, we are able to extract arbitrary hyperslices, combine slices together into a hyperprojection volume, or apply a 4D raycasting method to generate the same results. In combination with appropriate integration operators and transfer functions, we are able to extract and present different space-time features to the user. This paper describes a generalized axiomatic scale-space theory that makes it possible to derive the notions of linear scale-space, affine Gaussian scale-space and linear spatio-temporal scale-space using a similar set of assumptions (scale-space axioms). The notion of non-enhancement of local extrema is generalized from previous application over discrete and rotationally symmetric kernels to continuous and more general non-isotropic kernels over both spatial and spatio-temporal image domains. It is shown how a complete classification can be given of the linear (Gaussian) scale-space concepts that satisfy these conditions on isotropic spatial, non-isotropic spatial and spatio-temporal domains, which results in a general taxonomy of Gaussian scale-spaces for continuous image data. The resulting theory allows filter shapes to be tuned from specific context information and provides a theoretical foundation for the recently exploited mechanisms of shape adaptation and velocity adaptation, with highly useful applications in computer vision. It is also shown how time-causal spatio-temporal scale-spaces can be derived from similar assumptions. The mathematical structure of these scale-spaces is analyzed in detail concerning transformation properties over space and time, the temporal cascade structure they satisfy over time as well as properties of the resulting multi-scale spatio-temporal derivative operators. It is also shown how temporal derivatives with respect to transformed time can be defined, leading to the formulation of a novel analogue of scale normalized derivatives for time-causal scale-spaces. The kernels generated from these two types of theories have interesting relations to biological vision. We show how filter kernels generated from the Gaussian spatio-temporal scale-space as well as the time-causal spatio-temporal scale-space relate to spatio-temporal receptive field profiles registered from mammalian vision. Specifically, we show that there are close analogies to space-time separable cells in the LGN as well as to both space-time separable and non-separable cells in the striate cortex. We do also present a set of plausible models for complex cells using extended quasi-quadrature measures expressed in terms of scale normalized spatio-temporal derivatives. The theories presented as well as their relations to biological vision show that it is possible to describe a general set of Gaussian and or time-causal scale-spaces using a unified framework, which generalizes and complements previously presented scale-space formulations in this area.