Phenotyping is the process of measuring an organism's observable traits. Manual phenotyping of crops is a labor-intensive, time-consuming, costly, and error prone process. Accurate, automated, high-throughput phenotyping can relieve a huge burden in the crop breeding pipeline. In this paper, we propose a scalable, high-throughput approach to automatically count and segment panicles (heads), a key phenotype, from aerial sorghum crop imagery. Our counting approach uses the image density map obtained from dot or region annotation as the target with a novel deep convolutional neural network architecture. We also propose a novel instance segmentation algorithm using the estimated density map, to identify the individual panicles in the presence of occlusion. With real Sorghum aerial images, we obtain a mean absolute error (MAE) of 1.06 for counting which is better than using well-known crowd counting approaches such as CCNN, MCNN and CSRNet models. The instance segmentation model also produces respectable results which will be ultimately useful in reducing the manual annotation workload for future data.
Crowd and Traffic Monitoring : Counting people in a crowd @cite_16 @cite_20 @cite_3 @cite_53 is perhaps the focus area of new counting approaches in many mainstream computer vision venues, and hence expanded in Section . There is also a good amount of literature on methods used for counting vehicles @cite_50 @cite_36 @cite_14 @cite_42 . Medical imaging : For general cell counting @cite_35 , cell counting and detection using fully convolutional regression networks @cite_25 , counting cells for images showing a developing human embryo @cite_33 , and counting bacteria colonies @cite_23 .
@cite_35 @cite_14 @cite_33 @cite_36 @cite_53 @cite_42 @cite_3 @cite_50 @cite_23 @cite_16 @cite_25 @cite_20
2964264515 2072232009 2729018917 2094950164
The task of crowd counting is to automatically estimate the pedestrian number in crowd images. To cope with the scale and perspective changes that commonly exist in crowd images, state-of-the-art approaches employ multi-column CNN architectures to regress density maps of crowd images. Multiple columns have different receptive fields corresponding to pedestrians (heads) of different scales. We instead propose a scale-adaptive CNN (SaCNN) architecture with a backbone of fixed small receptive fields. We extract feature maps from multiple layers and adapt them to have the same output size; we combine them to produce the final density map. The number of people is computed by integrating the density map. We also introduce a relative count loss along with the density map loss to improve the network generalization on crowd scenes with few pedestrians, where most representative approaches perform poorly on. We conduct extensive experiments on the ShanghaiTech, UCF CC 50 and WorldExpo'10 datasets as well as a new dataset SmartCity that we collect for crowd scenes with few people. The results demonstrate significant improvements of SaCNN over the state-of-the-art. We propose to leverage multiple sources of information to compute an estimate of the number of individuals present in an extremely dense crowd visible in a single image. Due to problems including perspective, occlusion, clutter, and few pixels per person, counting by human detection in such images is almost impossible. Instead, our approach relies on multiple sources such as low confidence head detections, repetition of texture elements (using SIFT), and frequency-domain analysis to estimate counts, along with confidence associated with observing individuals, in an image region. Secondly, we employ a global consistency constraint on counts using Markov Random Field. This caters for disparity in counts in local neighborhoods and across scales. We tested our approach on a new dataset of fifty crowd images containing 64K annotated humans, with the head counts ranging from 94 to 4543. This is in stark contrast to datasets used for existing methods which contain not more than tens of individuals. We experimentally demonstrate the efficacy and reliability of the proposed approach by quantifying the counting performance. Abstract Estimating count and density maps from crowd images has a wide range of applications such as video surveillance, traffic monitoring, public safety and urban planning. In addition, techniques developed for crowd counting can be applied to related tasks in other fields of study such as cell microscopy, vehicle counting and environmental survey. The task of crowd counting and density map estimation is riddled with many challenges such as occlusions, non-uniform density, intra-scene and inter-scene variations in scale and perspective. Nevertheless, over the last few years, crowd count analysis has evolved from earlier methods that are often limited to small variations in crowd density and scales to the current state-of-the-art methods that have developed the ability to perform successfully on a wide range of scenarios. The success of crowd counting methods in the recent years can be largely attributed to deep learning and publications of challenging datasets. In this paper, we provide a comprehensive survey of recent Convolutional Neural Network (CNN) based approaches that have demonstrated significant improvements over earlier methods that rely largely on hand-crafted representations. First, we briefly review the pioneering methods that use hand-crafted representations and then we delve in detail into the deep learning-based approaches and recently published datasets. Furthermore, we discuss the merits and drawbacks of existing CNN-based approaches and identify promising avenues of research in this rapidly evolving field. Real-time accurate crowd counting is one of important tasks in intelligent visual surveillance systems. Most previous works can only count passing people robustly without heavy occlusions which are very common in the practical surveillance scenes. To solve this difficult problem, we propose a new method for crowd counting for RGB-D (RGB plus depth) data using a commodity depth camera. In our method, we first detect each head-shoulder of the passing or still person in the surveillance region with fast template matching based on depth information including pedestrian filling with convex hull segmentation. Then, we track and count each detected head-shoulder based on RGB information bidirectionally. By using this approach, we have built a practical system for robust and fast crowd counting. Extensive experimental results show that our method achieves significant improvement comparing to states-of-the-art approach, and the built system is not only robust to heavy occlusions, but also can be deployed in the real time crowd counting application scenes.