Over 50 million scholarly articles have been published: they constitute a unique repository of knowledge. In particular, one may infer from them relations between scientific concepts, such as synonyms and hyponyms. Artificial neural networks have been recently explored for relation extraction. In this work, we continue this line of work and present a system based on a convolutional neural network to extract relations. Our model ranked first in the SemEval-2017 task 10 (ScienceIE) for relation extraction in scientific articles (subtask C).
More recently, a few studies have investigated the use of artificial neural networks for relation extraction @cite_33 @cite_6 @cite_3 . Our approach follows this line of work.
@cite_3 @cite_33 @cite_6
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Over 50 million scholarly articles have been published: they constitute a unique repository of knowledge. In particular, one may infer from them relations between scientific concepts, such as synonyms and hyponyms. Artificial neural networks have been recently explored for relation extraction. In this work, we continue this line of work and present a system based on a convolutional neural network to extract relations. Our model ranked first in the SemEval-2017 task 10 (ScienceIE) for relation extraction in scientific articles (subtask C). Relation extraction has been widely studied to extract new relational facts from open corpus. Previous relation extraction methods are faced with the problem of wrong labels and noisy data, which substantially decrease the performance of the model. In this paper, we propose an ensemble neural network model - Adaptive Boosting LSTMs with Attention, to more effectively perform relation extraction. Specifically, our model first employs the recursive neural network LSTMs to embed each sentence. Then we import attention into LSTMs by considering that the words in a sentence do not contribute equally to the semantic meaning of the sentence. Next via adaptive boosting, we build strategically several such neural classifiers. By ensembling multiple such LSTM classifiers with adaptive boosting, we could build a more effective and robust joint ensemble neural networks based relation extractor. Experiment results on real dataset demonstrate the superior performance of the proposed model, improving F1-score by about 8 compared to the state-of-the-art models. The code of this work is publicly available on this https URL Up to now, relation extraction systems have made extensive use of features generated by linguistic analysis modules. Errors in these features lead to errors of relation detection and classification. In this work, we depart from these traditional approaches with complicated feature engineering by introducing a convolutional neural network for relation extraction that automatically learns features from sentences and minimizes the dependence on external toolkits and resources. Our model takes advantages of multiple window sizes for filters and pre-trained word embeddings as an initializer on a non-static architecture to improve the performance. We emphasize the relation extraction problem with an unbalanced corpus. The experimental results show that our system significantly outperforms not only the best baseline systems for relation extraction but also the state-of-the-art systems for relation classification. Abstract Biomedical relation extraction can automatically extract high-quality biomedical relations from biomedical texts, which is a vital step for the mining of biomedical knowledge hidden in the literature. Recurrent neural networks (RNNs) and convolutional neural networks (CNNs) are two major neural network models for biomedical relation extraction. Neural network-based methods for biomedical relation extraction typically focus on the sentence sequence and employ RNNs or CNNs to learn the latent features from sentence sequences separately. However, RNNs and CNNs have their own advantages for biomedical relation extraction. Combining RNNs and CNNs may improve biomedical relation extraction. In this paper, we present a hybrid model for the extraction of biomedical relations that combines RNNs and CNNs. First, the shortest dependency path (SDP) is generated based on the dependency graph of the candidate sentence. To make full use of the SDP, we divide the SDP into a dependency word sequence and a relation sequence. Then, RNNs and CNNs are employed to automatically learn the features from the sentence sequence and the dependency sequences, respectively. Finally, the output features of the RNNs and CNNs are combined to detect and extract biomedical relations. We evaluate our hybrid model using five public (protein-protein interaction) PPI corpora and a (drug-drug interaction) DDI corpus. The experimental results suggest that the advantages of RNNs and CNNs in biomedical relation extraction are complementary. Combining RNNs and CNNs can effectively boost biomedical relation extraction performance.