Phenotyping is the process of measuring an organism's observable traits. Manual phenotyping of crops is a labor-intensive, time-consuming, costly, and error prone process. Accurate, automated, high-throughput phenotyping can relieve a huge burden in the crop breeding pipeline. In this paper, we propose a scalable, high-throughput approach to automatically count and segment panicles (heads), a key phenotype, from aerial sorghum crop imagery. Our counting approach uses the image density map obtained from dot or region annotation as the target with a novel deep convolutional neural network architecture. We also propose a novel instance segmentation algorithm using the estimated density map, to identify the individual panicles in the presence of occlusion. With real Sorghum aerial images, we obtain a mean absolute error (MAE) of 1.06 for counting which is better than using well-known crowd counting approaches such as CCNN, MCNN and CSRNet models. The instance segmentation model also produces respectable results which will be ultimately useful in reducing the manual annotation workload for future data.
A simple but elegant member of this family is the multi-column CNN (MCNN) @cite_0 , as seen in Figure , where the component models in the ensemble are CCNNs with the receptive fields in the convolutional kernel designed for a particular head size. The resulting CCNN predictors are then combined into one density map with a fully convolutional layer. The CCNN tends to over estimate the count when the density is very low and under estimate the count near the horizon line where the density is extremely high. This was used advantageously in the DecideNet model @cite_44 where they noted that the counting by detection approach is particularly good when the density is very low. They then used another neural network to estimate an attention map and combine the two approaches.
@cite_0 @cite_44
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In this paper we address the problem of counting objects instances in images. Our models are able to precisely estimate the number of vehicles in a traffic congestion, or to count the humans in a very crowded scene. Our first contribution is the proposal of a novel convolutional neural network solution, named Counting CNN (CCNN). Essentially, the CCNN is formulated as a regression model where the network learns how to map the appearance of the image patches to their corresponding object density maps. Our second contribution consists in a scale-aware counting model, the Hydra CNN, able to estimate object densities in different very crowded scenarios where no geometric information of the scene can be provided. Hydra CNN learns a multiscale non-linear regression model which uses a pyramid of image patches extracted at multiple scales to perform the final density prediction. We report an extensive experimental evaluation, using up to three different object counting benchmarks, where we show how our solutions achieve a state-of-the-art performance. This paper aims to develop a method than can accurately estimate the crowd count from an individual image with arbitrary crowd density and arbitrary perspective. To this end, we have proposed a simple but effective Multi-column Convolutional Neural Network (MCNN) architecture to map the image to its crowd density map. The proposed MCNN allows the input image to be of arbitrary size or resolution. By utilizing filters with receptive fields of different sizes, the features learned by each column CNN are adaptive to variations in people head size due to perspective effect or image resolution. Furthermore, the true density map is computed accurately based on geometry-adaptive kernels which do not need knowing the perspective map of the input image. Since exiting crowd counting datasets do not adequately cover all the challenging situations considered in our work, we have collected and labelled a large new dataset that includes 1198 images with about 330,000 heads annotated. On this challenging new dataset, as well as all existing datasets, we conduct extensive experiments to verify the effectiveness of the proposed model and method. In particular, with the proposed simple MCNN model, our method outperforms all existing methods. In addition, experiments show that our model, once trained on one dataset, can be readily transferred to a new dataset. Crowd counting, for estimating the number of people in a crowd using vision-based computer techniques, has attracted much interest in the research community. Although many attempts have been reported, real-world problems, such as huge variation in subjects' sizes in images and serious occlusion among people, make it still a challenging problem. In this paper, we propose an Adaptive Counting Convolutional Neural Network (A-CCNN) and consider the scale variation of objects in a frame adaptively so as to improve the accuracy of counting. Our method takes advantages of contextual information to provide more accurate and adaptive density maps and crowd counting in a scene. Extensively experimental evaluation is conducted using different benchmark datasets for object-counting and shows that the proposed approach is effective and outperforms state-of-the-art approaches. In real-world crowd counting applications, the crowd densities vary greatly in spatial and temporal domains. A detection based counting method will estimate crowds accurately in low density scenes, while its reliability in congested areas is downgraded. A regression based approach, on the other hand, captures the general density information in crowded regions. Without knowing the location of each person, it tends to overestimate the count in low density areas. Thus, exclusively using either one of them is not sufficient to handle all kinds of scenes with varying densities. To address this issue, a novel end-to-end crowd counting framework, named DecideNet (DEteCtIon and Density Estimation Network) is proposed. It can adaptively decide the appropriate counting mode for different locations on the image based on its real density conditions. DecideNet starts with estimating the crowd density by generating detection and regression based density maps separately. To capture inevitable variation in densities, it incorporates an attention module, meant to adaptively assess the reliability of the two types of estimations. The final crowd counts are obtained with the guidance of the attention module to adopt suitable estimations from the two kinds of density maps. Experimental results show that our method achieves state-of-the-art performance on three challenging crowd counting datasets. The task of crowd counting is to automatically estimate the pedestrian number in crowd images. To cope with the scale and perspective changes that commonly exist in crowd images, state-of-the-art approaches employ multi-column CNN architectures to regress density maps of crowd images. Multiple columns have different receptive fields corresponding to pedestrians (heads) of different scales. We instead propose a scale-adaptive CNN (SaCNN) architecture with a backbone of fixed small receptive fields. We extract feature maps from multiple layers and adapt them to have the same output size; we combine them to produce the final density map. The number of people is computed by integrating the density map. We also introduce a relative count loss along with the density map loss to improve the network generalization on crowd scenes with few pedestrians, where most representative approaches perform poorly on. We conduct extensive experiments on the ShanghaiTech, UCF CC 50 and WorldExpo'10 datasets as well as a new dataset SmartCity that we collect for crowd scenes with few people. The results demonstrate significant improvements of SaCNN over the state-of-the-art. For crowded scenes, the accuracy of object-based computer vision methods declines when the images are low-resolution and objects have severe occlusions. Taking counting methods for example, almost all the recent state-of-the-art counting methods bypass explicit detection and adopt regression-based methods to directly count the objects of interest. Among regression-based methods, density map estimation, where the number of objects inside a subregion is the integral of the density map over that subregion, is especially promising because it preserves spatial information, which makes it useful for both counting and localization (detection and tracking). With the power of deep convolutional neural networks (CNNs) the counting performance has improved steadily. The goal of this paper is to evaluate density maps generated by density estimation methods on a variety of crowd analysis tasks, including counting, detection, and tracking. Most existing CNN methods produce density maps with resolution that is smaller than the original images, due to the downsample strides in the convolution pooling operations. To produce an original-resolution density map, we also evaluate a classical CNN that uses a sliding window regressor to predict the density for every pixel in the image. We also consider a fully convolutional adaptation, with skip connections from lower convolutional layers to compensate for loss in spatial information during upsampling. In our experiments, we found that the lower-resolution density maps sometimes have better counting performance. In contrast, the original-resolution density maps improved localization tasks, such as detection and tracking, compared with bilinear upsampling the lower-resolution density maps. Finally, we also propose several metrics for measuring the quality of a density map, and relate them to experiment results on counting and localization. For crowded scenes, the accuracy of object-based computer vision methods declines when the images are low-resolution and objects have severe occlusions. Taking counting methods for example, almost all the recent state-of-the-art counting methods bypass explicit detection and adopt regression-based methods to directly count the objects of interest. Among regression-based methods, density map estimation, where the number of objects inside a subregion is the integral of the density map over that subregion, is especially promising because it preserves spatial information, which makes it useful for both counting and localization (detection and tracking). With the power of deep convolutional neural networks (CNNs) the counting performance has improved steadily. The goal of this paper is to evaluate density maps generated by density estimation methods on a variety of crowd analysis tasks, including counting, detection, and tracking. Most existing CNN methods produce density maps with resolution that is smaller than the original images, due to the downsample strides in the convolution pooling operations. To produce an original-resolution density map, we also evaluate a classical CNN that uses a sliding window regressor to predict the density for every pixel in the image. We also consider a fully convolutional (FCNN) adaptation, with skip connections from lower convolutional layers to compensate for loss in spatial information during upsampling. In our experiments, we found that the lower-resolution density maps sometimes have better counting performance. In contrast, the original-resolution density maps improved localization tasks, such as detection and tracking, compared to bilinear upsampling the lower-resolution density maps. Finally, we also propose several metrics for measuring the quality of a density map, and relate them to experiment results on counting and localization. In this work, we tackle the problem of crowd counting in images. We present a Convolutional Neural Network (CNN) based density estimation approach to solve this problem. Predicting a high resolution density map in one go is a challenging task. Hence, we present a two branch CNN architecture for generating high resolution density maps, where the first branch generates a low resolution density map, and the second branch incorporates the low resolution prediction and feature maps from the first branch to generate a high resolution density map. We also propose a multi-stage extension of our approach where each stage in the pipeline utilizes the predictions from all the previous stages. Empirical comparison with the previous state-of-the-art crowd counting methods shows that our method achieves the lowest mean absolute error on three challenging crowd counting benchmarks: Shanghaitech, WorldExpo’10, and UCF datasets. We propose a novel crowd counting model that maps a given crowd scene to its density. Crowd analysis is compounded by myriad of factors like inter-occlusion between people due to extreme crowding, high similarity of appearance between people and background elements, and large variability of camera view-points. Current state-of-the art approaches tackle these factors by using multi-scale CNN architectures, recurrent networks and late fusion of features from multi-column CNN with different receptive fields. We propose switching convolutional neural network that leverages variation of crowd density within an image to improve the accuracy and localization of the predicted crowd count. Patches from a grid within a crowd scene are relayed to independent CNN regressors based on crowd count prediction quality of the CNN established during training. The independent CNN regressors are designed to have different receptive fields and a switch classifier is trained to relay the crowd scene patch to the best CNN regressor. We perform extensive experiments on all major crowd counting datasets and evidence better performance compared to current state-of-the-art methods. We provide interpretable representations of the multichotomy of space of crowd scene patches inferred from the switch. It is observed that the switch relays an image patch to a particular CNN column based on density of crowd. We present a novel method called Contextual Pyramid CNN (CP-CNN) for generating high-quality crowd density and count estimation by explicitly incorporating global and local contextual information of crowd images. The proposed CP-CNN consists of four modules: Global Context Estimator (GCE), Local Context Estimator (LCE), Density Map Estimator (DME) and a Fusion-CNN (F-CNN). GCE is a VGG-16 based CNN that encodes global context and it is trained to classify input images into different density classes, whereas LCE is another CNN that encodes local context information and it is trained to perform patch-wise classification of input images into different density classes. DME is a multi-column architecture-based CNN that aims to generate high-dimensional feature maps from the input image which are fused with the contextual information estimated by GCE and LCE using F-CNN. To generate high resolution and high-quality density maps, F-CNN uses a set of convolutional and fractionally-strided convolutional layers and it is trained along with the DME in an end-to-end fashion using a combination of adversarial loss and pixellevel Euclidean loss. Extensive experiments on highly challenging datasets show that the proposed method achieves significant improvements over the state-of-the-art methods. We present a novel method called Contextual Pyramid CNN (CP-CNN) for generating high-quality crowd density and count estimation by explicitly incorporating global and local contextual information of crowd images. The proposed CP-CNN consists of four modules: Global Context Estimator (GCE), Local Context Estimator (LCE), Density Map Estimator (DME) and a Fusion-CNN (F-CNN). GCE is a VGG-16 based CNN that encodes global context and it is trained to classify input images into different density classes, whereas LCE is another CNN that encodes local context information and it is trained to perform patch-wise classification of input images into different density classes. DME is a multi-column architecture-based CNN that aims to generate high-dimensional feature maps from the input image which are fused with the contextual information estimated by GCE and LCE using F-CNN. To generate high resolution and high-quality density maps, F-CNN uses a set of convolutional and fractionally-strided convolutional layers and it is trained along with the DME in an end-to-end fashion using a combination of adversarial loss and pixel-level Euclidean loss. Extensive experiments on highly challenging datasets show that the proposed method achieves significant improvements over the state-of-the-art methods. Estimating crowd count in densely crowded scenes is an extremely challenging task due to non-uniform scale variations. In this paper, we propose a novel end-to-end cascaded network of CNNs to jointly learn crowd count classification and density map estimation. Classifying crowd count into various groups is tantamount to coarsely estimating the total count in the image thereby incorporating a high-level prior into the density estimation network. This enables the layers in the network to learn globally relevant discriminative features which aid in estimating highly refined density maps with lower count error. The joint training is performed in an end-to-end fashion. Extensive experiments on highly challenging publicly available datasets show that the proposed method achieves lower count error and better quality density maps as compared to the recent state-of-the-art methods. In this paper, we develop deep spatio-temporal neural networks to sequentially count vehicles from low quality videos captured by city cameras (citycams). Citycam videos have low resolution, low frame rate, high occlusion and large perspective, making most existing methods lose their efficacy. To overcome limitations of existing methods and incorporate the temporal information of traffic video, we design a novel FCN-rLSTM network to jointly estimate vehicle density and vehicle count by connecting fully convolutional neural networks (FCN) with long short term memory networks (LSTM) in a residual learning fashion. Such design leverages the strengths of FCN for pixel-level prediction and the strengths of LSTM for learning complex temporal dynamics. The residual learning connection reformulates the vehicle count regression as learning residual functions with reference to the sum of densities in each frame, which significantly accelerates the training of networks. To preserve feature map resolution, we propose a Hyper-Atrous combination to integrate atrous convolution in FCN and combine feature maps of different convolution layers. FCN-rLSTM enables refined feature representation and a novel end-to-end trainable mapping from pixels to vehicle count. We extensively evaluated the proposed method on different counting tasks with three datasets, with experimental results demonstrating their effectiveness and robustness. In particular, FCN-rLSTM reduces the mean absolute error (MAE) from 5.31 to 4.21 on TRANCOS, and reduces the MAE from 2.74 to 1.53 on WebCamT. Training process is accelerated by 5 times on average. In this paper, we develop deep spatio-temporal neural networks to sequentially count vehicles from low quality videos captured by city cameras (citycams). Citycam videos have low resolution, low frame rate, high occlusion and large perspective, making most existing methods lose their efficacy. To overcome limitations of existing methods and incorporate the temporal information of traffic video, we design a novel FCN-rLSTM network to jointly estimate vehicle density and vehicle count by connecting fully convolutional neural networks (FCN) with long short term memory networks (LSTM) in a residual learning fashion. Such design leverages the strengths of FCN for pixel-level prediction and the strengths of LSTM for learning complex temporal dynamics. The residual learning connection reformulates the vehicle count regression as learning residual functions with reference to the sum of densities in each frame, which significantly accelerates the training of networks. To preserve feature map resolution, we propose a Hyper-Atrous combination to integrate atrous convolution in FCN and combine feature maps of different convolution layers. FCN-rLSTM enables refined feature representation and a novel end-to-end trainable mapping from pixels to vehicle count. We extensively evaluated the proposed method on different counting tasks with three datasets, with experimental results demonstrating their effectiveness and robustness. In particular, FCN-rLSTM reduces the mean absolute error (MAE) from 5.31 to 4.21 on TRANCOS; and reduces the MAE from 2.74 to 1.53 on WebCamT. Training process is accelerated by 5 times on average. Our work proposes a novel deep learning framework for estimating crowd density from static images of highly dense crowds. We use a combination of deep and shallow, fully convolutional networks to predict the density map for a given crowd image. Such a combination is used for effectively capturing both the high-level semantic information (face body detectors) and the low-level features (blob detectors), that are necessary for crowd counting under large scale variations. As most crowd datasets have limited training samples ( We propose a new method to count objects of specific categories that are significantly smaller than the ground sampling distance of a satellite image. This task is hard due to the cluttered nature of scenes where different object categories occur. Target objects can be partially occluded, vary in appearance within the same class and look alike to different categories. Since traditional object detection is infeasible due to the small size of objects with respect to the pixel size, we cast object counting as a density estimation problem. To distinguish objects of different classes, our approach combines density estimation with semantic segmentation in an end-to-end learnable convolutional neural network (CNN). Experiments show that deep semantic density estimation can robustly count objects of various classes in cluttered scenes. Experiments also suggest that we need specific CNN architectures in remote sensing instead of blindly applying existing ones from computer vision. Because of the powerful learning capability of deep neural networks, counting performance via density map estimation has improved significantly during the past several years. However, it is still very challenging due to severe occlusion, large scale variations, and perspective distortion. Scale variations (from image to image) coupled with perspective distortion (within one image) result in huge scale changes of the object size. Earlier methods based on convolutional neural networks (CNN) typically did not handle this scale variation explicitly, until Hydra-CNN and MCNN. MCNN uses three columns, each with different filter sizes, to extract features at different scales. In this paper, in contrast to using filters of different sizes, we utilize an image pyramid to deal with scale variations. It is more effective and efficient to resize the input fed into the network, as compared to using larger filter sizes. Secondly, we adaptively fuse the predictions from different scales (using adaptively changing per-pixel weights), which makes our method adapt to scale changes within an image. The adaptive fusing is achieved by generating an across-scale attention map, which softly selects a suitable scale for each pixel, followed by a 1x1 convolution. Extensive experiments on three popular datasets show very compelling results. In this paper, we propose a deep Convolutional Neural Network (CNN) for counting the number of people across a line-of-interest (LOI) in surveillance videos. It is a challenging problem and has many potential applications. Observing the limitations of temporal slices used by state-of-the-art LOI crowd counting methods, our proposed CNN directly estimates the crowd counts with pairs of video frames as inputs and is trained with pixel-level supervision maps. Such rich supervision information helps our CNN learn more discriminative feature representations. A two-phase training scheme is adopted, which decomposes the original counting problem into two easier sub-problems, estimating crowd density map and estimating crowd velocity map. Learning to solve the sub-problems provides a good initial point for our CNN model, which is then fine-tuned to solve the original counting problem. A new dataset with pedestrian trajectory annotations is introduced for evaluating LOI crowd counting methods and has more annotations than any existing one. Our extensive experiments show that our proposed method is robust to variations of crowd density, crowd velocity, and directions of the LOI, and outperforms state-of-the-art LOI counting methods. Counting people or objects with significantly varying scales and densities has attracted much interest from the research community and yet it remains an open problem. In this paper, we propose a simple but an efficient and effective network, named DENet, which is composed of two components, i.e., a detection network (DNet) and an encoder-decoder estimation network (ENet). We first run DNet on an input image to detect and count individuals who can be segmented clearly. Then, ENet is utilized to estimate the density maps of the remaining areas, where the numbers of individuals cannot be detected. We propose a modified Xception as an encoder for feature extraction and a combination of dilated convolution and transposed convolution as a decoder. In the ShanghaiTech Part A, UCF and WorldExpo'10 datasets, our DENet achieves lower Mean Absolute Error (MAE) than those of the state-of-the-art methods. Abstract Estimating count and density maps from crowd images has a wide range of applications such as video surveillance, traffic monitoring, public safety and urban planning. In addition, techniques developed for crowd counting can be applied to related tasks in other fields of study such as cell microscopy, vehicle counting and environmental survey. The task of crowd counting and density map estimation is riddled with many challenges such as occlusions, non-uniform density, intra-scene and inter-scene variations in scale and perspective. Nevertheless, over the last few years, crowd count analysis has evolved from earlier methods that are often limited to small variations in crowd density and scales to the current state-of-the-art methods that have developed the ability to perform successfully on a wide range of scenarios. The success of crowd counting methods in the recent years can be largely attributed to deep learning and publications of challenging datasets. In this paper, we provide a comprehensive survey of recent Convolutional Neural Network (CNN) based approaches that have demonstrated significant improvements over earlier methods that rely largely on hand-crafted representations. First, we briefly review the pioneering methods that use hand-crafted representations and then we delve in detail into the deep learning-based approaches and recently published datasets. Furthermore, we discuss the merits and drawbacks of existing CNN-based approaches and identify promising avenues of research in this rapidly evolving field.