Network representation learning (NRL) aims to learn low-dimensional vectors for vertices in a network. Most existing NRL methods focus on learning representations from local context of vertices (such as their neighbors). Nevertheless, vertices in many complex networks also exhibit significant global patterns widely known as communities. It's intuitive that vertices in the same community tend to connect densely and share common attributes. These patterns are expected to improve NRL and benefit relevant evaluation tasks, such as link prediction and vertex classification. Inspired by the analogy between network representation learning and text modeling, we propose a unified NRL framework by introducing community information of vertices, named as Community-enhanced Network Representation Learning (CNRL). CNRL simultaneously detects community distribution of each vertex and learns embeddings of both vertices and communities. Moreover, the proposed community enhancement mechanism can be applied to various existing NRL models. In experiments, we evaluate our model on vertex classification, link prediction, and community detection using several real-world datasets. The results demonstrate that CNRL significantly and consistently outperforms other state-of-the-art methods while verifying our assumptions on the correlations between vertices and communities.
In recent years, community affiliation based algorithms show their effectiveness on overlapping community detection @cite_25 @cite_33 @cite_39 @cite_38 . Community affiliation based algorithms predefine the number of communities and learn a vertex-community strength vector for each vertex and assign communities to vertices according to the vector. For example, Yang @cite_38 proposes Non-negative Matrix Factorization (NMF) method, which approximates adjacency matrix @math by @math where matrix @math is vertex-community affinity matrix. Then the algorithm learns non-negative vertex embeddings and converts each dimension of the embeddings into a community. These community affiliation based algorithms try to approximate the adjacency matrix in value and design different objective functions for it. Our model follows the idea to represent the community relationship with a non-negative vector, but we don't explicitly set hard community membership for the vertices.
@cite_38 @cite_25 @cite_33 @cite_39
2139694940 2119571791 2050239729
Community detection is an important technique to understand structures and patterns in complex networks. Recently, overlapping community detection becomes a trend due to the ubiquity of overlapping and nested communities in real world. However, existing approaches have ignored the use of implicit link preference information, i.e., links can reflect a node's preference on the targets of connections it wants to build. This information has strong impact on community detection since a node prefers to build links with nodes inside its community than those outside its community. In this paper, we propose a preference-based nonnegative matrix factorization (PNMF) model to incorporate implicit link preference information. Unlike conventional matrix factorization approaches, which simply approximate the original adjacency matrix in value, our model maximizes the likelihood of the preference order for each node by following the intuition that a node prefers its neighbors than other nodes. Our model overcomes the indiscriminate penalty problem in which non-linked pairs inside one community are equally penalized in objective functions as those across two communities. We propose a learning algorithm which can learn a node-community membership matrix via stochastic gradient descent with bootstrap sampling. We evaluate our PNMF model on several real-world networks. Experimental results show that our model outperforms state-of-the-art approaches and can be applied to large datasets. One of the main organizing principles in real-world networks is that of network communities, where sets of nodes organize into densely linked clusters. Communities in networks often overlap as nodes can belong to multiple communities at once. Identifying such overlapping communities is crucial for the understanding the structure as well as the function of real-world networks. Even though community structure in networks has been widely studied in the past, practically all research makes an implicit assumption that overlaps between communities are less densely connected than the non-overlapping parts themselves. Here we validate this assumption on 6 large scale social, collaboration and information networks where nodes explicitly state their community memberships. By examining such ground-truth communities we find that the community overlaps are more densely connected than the non-overlapping parts, which is in sharp contrast to the conventional wisdom that community overlaps are more sparsely connected than the communities themselves. Practically all existing community detection methods fail to detect communities with dense overlaps. We propose Community-Affiliation Graph Model, a model-based community detection method that builds on bipartite node-community affiliation networks. Our method successfully captures overlapping, non-overlapping as well as hierarchically nested communities, and identifies relevant communities more accurately than the state-of-the-art methods in networks ranging from biological to social and information networks. Identifying overlapping communities in networks is a challenging task. In this work we present a probabilistic approach to community detection that utilizes a Bayesian non-negative matrix factorization model to extract overlapping modules from a network. The scheme has the advantage of soft-partitioning solutions, assignment of node participation scores to modules, and an intuitive foundation. We present the performance of the method against a variety of benchmark problems and compare and contrast it to several other algorithms for community detection. We consider the problem of fuzzy community detection in networks, which complements and expands the concept of overlapping community structure. Our approach allows each vertex of the graph to belong to multiple communities at the same time, determined by exact numerical membership degrees, even in the presence of uncertainty in the data being analyzed. We create an algorithm for determining the optimal membership degrees with respect to a given goal function. Based on the membership degrees, we introduce a measure that is able to identify outlier vertices that do not belong to any of the communities, bridge vertices that have significant membership in more than one single community, and regular vertices that fundamentally restrict their interactions within their own community, while also being able to quantify the centrality of a vertex with respect to its dominant community. The method can also be used for prediction in case of uncertainty in the data set analyzed. The number of communities can be given in advance, or determined by the algorithm itself, using a fuzzified variant of the modularity function. The technique is able to discover the fuzzy community structure of different real world networks including, but not limited to, social networks, scientific collaboration networks, and cortical networks, with high confidence. Networks commonly exhibit a community structure, whereby groups of vertices are more densely connected to each other than to other vertices. Often these communities overlap, such that each vertex may occur in more than one community. However, two distinct types of overlapping are possible: crisp (where each vertex belongs fully to each community of which it is a member) and fuzzy (where each vertex belongs to each community to a different extent). We investigate the effects of the fuzziness of community overlap. We find that it has a strong effect on the performance of community detection methods: some algorithms perform better with fuzzy overlapping while others favour crisp overlapping. We also evaluate the performance of some algorithms that recover the belonging coefficients when the overlap is fuzzy. Finally, we investigate whether real networks contain fuzzy or crisp overlapping. We propose an algorithm for finding overlapping community structure in very large networks. The algorithm is based on the label propagation technique of Raghavan, Albert and Kumara, but is able to detect communities that overlap. Like the original algorithm, vertices have labels that propagate between neighbouring vertices so that members of a community reach a consensus on their community membership. Our main contribution is to extend the label and propagation step to include information about more than one community: each vertex can now belong to up to v communities, where v is the parameter of the algorithm. Our algorithm can also handle weighted and bipartite networks. Tests on an independently designed set of benchmarks, and on real networks, show the algorithm to be highly effective in recovering overlapping communities. It is also very fast and can process very large and dense networks in a short time. We consider the problem of clustering a graph @math into two communities by observing a subset of the vertex correlations. Specifically, we consider the inverse problem with observed variables @math , where @math is the incidence matrix of a graph @math , @math is the vector of unknown vertex variables (with a uniform prior), and @math is a noise vector with Bernoulli @math i.i.d. entries. All variables and operations are Boolean. This model is motivated by coding, synchronization, and community detection problems. In particular, it corresponds to a stochastic block model or a correlation clustering problem with two communities and censored edges. Without noise, exact recovery (up to global flip) of @math is possible if and only the graph @math is connected, with a sharp threshold at the edge probability @math for Erdős-Renyi random graphs. The first goal of this paper is to determine how the edge probability @math needs to scale to allow exact recovery in the presence of noise. Defining the degree rate of the graph by @math , it is shown that exact recovery is possible if and only if @math . In other words, @math is the information theoretic threshold for exact recovery at low-SNR. In addition, an efficient recovery algorithm based on semidefinite programming is proposed and shown to succeed in the threshold regime up to twice the optimal rate. For a deterministic graph @math , defining the degree rate as @math , where @math is the minimum degree of the graph, it is shown that the proposed method achieves the rate @math , where @math is the spectral gap of the graph @math . Despite the prevalence of community detection algorithms, relatively less work has been done on understanding whether a network is indeed modular and how resilient the community structure is under perturbations. To address this issue, we propose a new vertex-based metric called "permanence", that can quantitatively give an estimate of the community- like structure of the network. The central idea of permanence is based on the observation that the strength of membership of a vertex to a community depends upon the following two factors: (i) the distribution of external connectivity of the vertex to individual communities and not the total external connectivity, and (ii) the strength of its internal connectivity and not just the total internal edges. In this paper, we demonstrate that compared to other metrics, permanence provides (i) a more accurate estimate of a derived community structure to the ground-truth community and (ii) is more sensitive to perturbations in the network. As a by-product of this study, we have also developed a community detection algorithm based on maximizing permanence. For a modular network structure, the results of our algorithm match well with ground-truth communities. We use a low-dimensional linear model to describe the user rating matrix in a recommendation system. A non-negativity constraint is enforced in the linear model to ensure that each user’s rating profile can be represented as an additive linear combination of canonical coordinates. In order to learn such a constrained linear model from an incomplete rating matrix, we introduce two variations on Non-negative Matrix Factorization (NMF): one based on the Expectation-Maximization (EM) procedure and the other a Weighted Nonnegative Matrix Factorization (WNMF). Based on our experiments, the EM procedure converges well empirically and is less susceptible to the initial starting conditions than WNMF, but the latter is much more computationally efficient. Taking into account the advantages of both algorithms, a hybrid approach is presented and shown to be effective in real data sets. Overall, the NMF-based algorithms obtain the best prediction performance compared with other popular collaborative filtering algorithms in our experiments; the resulting linear models also contain useful patterns and features corresponding to user communities. Many data analysis applications deal with large matrices and involve approximating the matrix using a small number of “components.” Typically, these components are linear combinations of the rows and columns of the matrix, and are thus difficult to interpret in terms of the original features of the input data. In this paper, we propose and study matrix approximations that are explicitly expressed in terms of a small number of columns and or rows of the data matrix, and thereby more amenable to interpretation in terms of the original data. Our main algorithmic results are two randomized algorithms which take as input an @math matrix @math and a rank parameter @math . In our first algorithm, @math is chosen, and we let @math , where @math is the Moore-Penrose generalized inverse of @math . In our second algorithm @math , @math , @math are chosen, and we let @math . ( @math and @math are matrices that consist of actual columns and rows, respectively, of @math , and @math is a generalized inverse of their intersection.) For each algorithm, we show that with probability at least @math , @math , where @math is the “best” rank- @math approximation provided by truncating the SVD of @math , and where @math is the Frobenius norm of the matrix @math . The number of columns of @math and rows of @math is a low-degree polynomial in @math , @math , and @math . Both the Numerical Linear Algebra community and the Theoretical Computer Science community have studied variants of these matrix decompositions over the last ten years. However, our two algorithms are the first polynomial time algorithms for such low-rank matrix approximations that come with relative-error guarantees; previously, in some cases, it was not even known whether such matrix decompositions exist. Both of our algorithms are simple and they take time of the order needed to approximately compute the top @math singular vectors of @math . The technical crux of our analysis is a novel, intuitive sampling method we introduce in this paper called “subspace sampling.” In subspace sampling, the sampling probabilities depend on the Euclidean norms of the rows of the top singular vectors. This allows us to obtain provable relative-error guarantees by deconvoluting “subspace” information and “size-of- @math ” information in the input matrix. This technique is likely to be useful for other matrix approximation and data analysis problems. Abstract Let G be a simple graph with vertices 1, 2, …, n . We consider representations of G by nonzero vectors x 1 ,x 2 ,…,x n ϵ R d such that for i ≠ j the inner product x i · x j is negative or zero according as vertex i is adjacent to or not adjacent to vertex j . The least dimension d necessary for such representations is studied as a function of G and of various restrictions placed upon the coordinates of the vectors and the values of the inner products. In particular, for some d such that d n 2 , there always exists a representation in which all coordinates are from −1,1 and all negative inner products have the same value. Various types of vector representations of graphs are related to Hadamard matrices, families of sets with prescribed intersections, and other combinatorial problems. Social life coalesces into communities through cooperation and conflict. As a case in point, Shwed and Bearman (2010) studied consensus and contention in scientific communities. They used a sophisticated modularity method to detect communities on the basis of scientific citations, which they then interpreted as directed positive network ties. They assumed that a lack of citations implies disagreement. Some scientific citations, however, are contentious and should therefore be represented by negative ties, like conflicting relations in general. After expanding the modularity method to incorporate negative ties, we show that a small proportion of negative ties, commonly present in science, is sufficient to significantly alter the community structure. In addition, our research suggests that without distinguishing negative ties, scientific communities actually represent specialized subfields, not contentious groups. Finally, we cast doubt on the assumption that lack of cites would signal disagreement. To show the general importance of discerning negative ties for understanding conflict and its impact on communities, we also analyze a public debate. Social network analysis has attracted increasing attention in recent years. In many social networks, besides friendship links among users, the phenomenon of users associating themselves with groups or communities is common. Thus, two networks exist simultaneously: the friendship network among users, and the affiliation network between users and groups. In this article, we tackle the affiliation recommendation problem, where the task is to predict or suggest new affiliations between users and communities, given the current state of the friendship and affiliation networks. More generally, affiliations need not be community affiliations---they can be a user’s taste, so affiliation recommendation algorithms have applications beyond community recommendation. In this article, we show that information from the friendship network can indeed be fruitfully exploited in making affiliation recommendations. Using a simple way of combining these networks, we suggest two models of user-community affinity for the purpose of making affiliation recommendations: one based on graph proximity, and another using latent factors to model users and communities. We explore the affiliation recommendation algorithms suggested by these models and evaluate these algorithms on two real-world networks, Orkut and Youtube. In doing so, we motivate and propose a way of evaluating recommenders, by measuring how good the top 50 recommendations are for the average user, and demonstrate the importance of choosing the right evaluation strategy. The algorithms suggested by the graph proximity model turn out to be the most effective. We also introduce scalable versions of these algorithms, and demonstrate their effectiveness. This use of link prediction techniques for the purpose of affiliation recommendation is, to our knowledge, novel. Community detection is an important task in network analysis. A community (also referred to as a cluster) is a set of cohesive vertices that have more connections inside the set than outside. In many social and information networks, these communities naturally overlap. For instance, in a social network, each vertex in a graph corresponds to an individual who usually participates in multiple communities. In this paper, we propose an efficient overlapping community detection algorithm using a seed expansion approach. The key idea of our algorithm is to find good seeds, and then greedily expand these seeds based on a community metric. Within this seed expansion method, we investigate the problem of how to determine good seed nodes in a graph. In particular, we develop new seeding strategies for a personalized PageRank clustering scheme that optimizes the conductance community score. An important step in our method is the neighborhood inflation step where seeds are modified to represent their entire vertex neighborhood. Experimental results show that our seed expansion algorithm outperforms other state-of-the-art overlapping community detection methods in terms of producing cohesive clusters and identifying ground-truth communities. We also show that our new seeding strategies are better than existing strategies, and are thus effective in finding good overlapping communities in real-world networks. One of the main organizing principles in real-world networks is that of network communities, where sets of nodes organize into densely linked clusters. Even though detection of such communities is of great interest, understanding the structure communities in large networks remains relatively limited. In particular, due to the unavailability of labeled ground-truth data, it was traditionally very hard to develop accurate models of network community structure. Here we use six large social, collaboration, and information networks where nodes explicitly state their ground-truth community memberships. For example, nodes in social networks join into explicitly defined interest based groups, and we use such groups as explicitly labeled ground-truth communities. We use such ground-truth communities to study their structural signatures by analyzing how ground-truth communities emerge in networks and how they overlap. We observe some surprising phenomena. First, ground-truth communities contain high-degree hub nodes that reside in community overlaps and link to most of the members of the community. Second, the overlaps of communities are more densely connected than the non-overlapping parts of communities. We show that this in contrast to the conventional wisdom that community overlaps are more sparsely connected than the non-overlapping parts themselves. We then show that many existing models of network communities do not capture dense community overlaps. This in turn means that most present models and community detection methods confuse overlaps as separate communities. In contrast, we present the community-affiliation graph model (AGM), a conceptual model of network community structure. We demonstrate that AGM reliably captures the overall structure of networks as well as the overlapping and hierarchical nature of network communities. We propose a new distributed algorithm based on alternating direction method of multipliers (ADMM) to minimize sum of locally known convex functions using communication over a network. This optimization problem emerges in many applications in distributed machine learning and statistical estimation. Our algorithm allows for a general choice of the communication weight matrix, which is used to combine the iterates at different nodes. We show that when functions are convex, both the objective function values and the feasibility violation converge with rate @math , where @math is the number of iterations. We then show that when functions are strongly convex and have Lipschitz continuous gradients, the sequence generated by our algorithm converges linearly to the optimal solution. In particular, an @math -optimal solution can be computed with @math iterations, where @math is the condition number of the problem. Our analysis highlights the effect of network and communication weights on the convergence rate through degrees of the nodes, the smallest nonzero eigenvalue, and operator norm of the communication matrix. Online communities serve various important functions, but many fail to thrive. Research on community success has traditionally focused on internal factors. In contrast, we take an ecological view to understand how the success of a community is influenced by other communities. We measured a community's relationship with other communities - its "niche" - through four dimensions: topic overlap, shared members, content linking, and shared offline organizational affiliation. We used a mixed-method approach, combining the quantitative analysis of 9495 online enterprise communities and interviews with community members. Our results show that too little or too much overlap in topic with other communities causes a community's activity to suffer. We also show that this main result is moderated in predictable ways by whether the community shares members with, links to content in, or shares an organizational affiliation with other communities. These findings provide new insight on community success, guiding online community designers on how to effectively position their community in relation to others. Complex networks are ubiquitous in our daily life, with the World Wide Web, social networks, and academic citation networks being some of the common examples. It is well understood that modeling and understanding the network structure is of crucial importance to revealing the network functions. One important problem, known as community detection, is to detect and extract the community structure of networks. More recently, the focus in this research topic has been switched to the detection of overlapping communities. In this paper, based on the matrix factorization approach, we propose a method called bounded nonnegative matrix tri-factorization (BNMTF). Using three factors in the factorization, we can explicitly model and learn the community membership of each node as well as the interaction among communities. Based on a unified formulation for both directed and undirected networks, the optimization problem underlying BNMTF can use either the squared loss or the generalized KL-divergence as its loss function. In addition, to address the sparsity problem as a result of missing edges, we also propose another setting in which the loss function is defined only on the observed edges. We report some experiments on real-world datasets to demonstrate the superiority of BNMTF over other related matrix factorization methods. Community detection is an important task in network analysis. A community (also referred to as a cluster) is a set of cohesive vertices that have more connections inside the set than outside. In many social and information networks, these communities naturally overlap. For instance, in a social network, each vertex in a graph corresponds to an individual who usually participates in multiple communities. One of the most successful techniques for finding overlapping communities is based on local optimization and expansion of a community metric around a seed set of vertices. In this paper, we propose an efficient overlapping community detection algorithm using a seed set expansion approach. In particular, we develop new seeding strategies for a personalized PageRank scheme that optimizes the conductance community score. The key idea of our algorithm is to find good seeds, and then expand these seed sets using the personalized PageRank clustering procedure. Experimental results show that this seed set expansion approach outperforms other state-of-the-art overlapping community detection methods. We also show that our new seeding strategies are better than previous strategies, and are thus effective in finding good overlapping clusters in a graph. Community detection and edge prediction are both forms of link mining: they are concerned with discovering the relations between vertices in networks. Some of the vertex similarity measures used in edge prediction are closely related to the concept of community structure. We use this insight to propose a novel method for improving existing community detection algorithms by using a simple vertex similarity measure. We show that this new strategy can be more effective in detecting communities than the basic community detection algorithms.