Knowledge graph embedding has been an active research topic for knowledge base completion, with progressive improvement from the initial TransE, TransH, to the current state-of-the-art ConvE. ConvE uses 2D convolution over embeddings and multiple layers of nonlinear features to model knowledge graphs. The model can be efficiently trained and scalable to large knowledge graphs. However, there is no structure enforcement in the embedding space of ConvE. The recent graph convolutional network (GCN) provides another way of learning graph node embedding by successfully utilizing graph connectivity structure. In this work, we propose a novel end-to-end Structure-Aware Convolutional Network (SACN) that takes the benefit of GCN and ConvE together. SACN consists of an encoder of a weighted graph convolutional network (WGCN), and a decoder of a convolutional network called Conv-TransE. WGCN utilizes knowledge graph node structure, node attributes and edge relation types. It has learnable weights that adapt the amount of information from neighbors used in local aggregation, leading to more accurate embeddings of graph nodes. Node attributes in the graph are represented as additional nodes in the WGCN. The decoder Conv-TransE enables the state-of-the-art ConvE to be translational between entities and relations while keeps the same link prediction performance as ConvE. We demonstrate the effectiveness of the proposed SACN on standard FB15k-237 and WN18RR datasets, and it gives about 10 relative improvement over the state-of-the-art ConvE in terms of HITS@1, HITS@3 and HITS@10.
GCNs were first proposed in @cite_27 where graph convolutional operations were defined in the Fourier domain. The eigendecomposition of the graph Laplacian caused intense computation. Later, smooth parametric spectral filters @cite_7 @cite_16 were introduced to achieve localization in the spatial domain and improve computational efficiency. Recently, @cite_9 simplified these spectral methods by a first-order approximation with the Chebyshev polynomials. The spatial graph convolution approaches @cite_3 define convolutions directly on graph, which sum up node features over all spatial neighbors using adjacency matrix.
@cite_7 @cite_9 @cite_3 @cite_27 @cite_16
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The rise of graph-structured data such as social networks, regulatory networks, citation graphs, and functional brain networks, in combination with resounding success of deep learning in various applications, has brought the interest in generalizing deep learning models to non-Euclidean domains. In this paper, we introduce a new spectral domain convolutional architecture for deep learning on graphs. The core ingredient of our model is a new class of parametric rational complex functions (Cayley polynomials) allowing to efficiently compute spectral filters on graphs that specialize on frequency bands of interest. Our model generates rich spectral filters that are localized in space, scales linearly with the size of the input data for sparsely-connected graphs, and can handle different constructions of Laplacian operators. Extensive experimental results show the superior performance of our approach, in comparison to other spectral domain convolutional architectures, on spectral image classification, community detection, vertex classification and matrix completion tasks. The rise of graph-structured data such as social networks, regulatory networks, citation graphs, and functional brain networks, in combination with resounding success of deep learning in various applications, has brought the interest in generalizing deep learning models to non-Euclidean domains. In this paper, we introduce a new spectral domain convolutional architecture for deep learning on graphs. The core ingredient of our model is a new class of parametric rational complex functions (Cayley polynomials) allowing to efficiently compute spectral filters on graphs that specialize on frequency bands of interest. Our model generates rich spectral filters that are localized in space, scales linearly with the size of the input data for sparsely connected graphs, and can handle different constructions of Laplacian operators. Extensive experimental results show the superior performance of our approach, in comparison to other spectral domain convolutional architectures, on spectral image classification, community detection, vertex classification, and matrix completion tasks. We propose a novel method for constructing wavelet transforms of functions defined on the vertices of an arbitrary finite weighted graph. Our approach is based on defining scaling using the graph analogue of the Fourier domain, namely the spectral decomposition of the discrete graph Laplacian L. Given a wavelet generating kernel g and a scale parameter t, we define the scaled wavelet operator Ttg = g(tL). The spectral graph wavelets are then formed by localizing this operator by applying it to an indicator function. Subject to an admissibility condition on g, this procedure defines an invertible transform. We explore the localization properties of the wavelets in the limit of fine scales. Additionally, we present a fast Chebyshev polynomial approximation algorithm for computing the transform that avoids the need for diagonalizing L. We highlight potential applications of the transform through examples of wavelets on graphs corresponding to a variety of different problem domains. Given multimillion-node graphs such as "who-follows-whom", "patent-cites-patent", "user-likes-page" and "actor director-makes-movie" networks, how can we find unexpected behaviors? When companies operate on the graphs with monetary incentives to sell Twitter "Followers" and Facebook page "Likes", the graphs show strange connectivity patterns. In this paper, we study a complete graph from a large Twitter-style social network, spanning up to 3.33 billion edges. We report strange deviations from typical patterns like smooth degree distributions. We find that such deviations are often due to "lockstep behavior" that large groups of followers connect to the same groups of followees. Our first contribution is that we study strange patterns on the adjacency matrix and in the spectral subspaces with respect to several flavors of lockstep. We discover that (a) the lockstep behaviors on the graph shape dense "block" in its adjacency matrix and creates "rays" in spectral subspaces, and (b) partially overlapping of the behaviors shape "staircase" in its adjacency matrix and creates "pearls" in spectral subspaces. The second contribution is that we provide a fast algorithm, using the discovery as a guide for practitioners, to detect users who offer the lockstep behaviors in undirected directed bipartite graphs. We carry out extensive experiments on both synthetic and real datasets, as well as public datasets from IMDb and US Patent. The results demonstrate the scalability and effectiveness of our proposed algorithm. We present Spline-based Convolutional Neural Networks (SplineCNNs), a variant of deep neural networks for irregular structured and geometric input, e.g., graphs or meshes. Our main contribution is a novel convolution operator based on B-splines, that makes the computation time independent from the kernel size due to the local support property of the B-spline basis functions. As a result, we obtain a generalization of the traditional CNN convolution operator by using continuous kernel functions parametrized by a fixed number of trainable weights. In contrast to related approaches that filter in the spectral domain, the proposed method aggregates features purely in the spatial domain. In addition, SplineCNN allows entire end-to-end training of deep architectures, using only the geometric structure as input, instead of handcrafted feature descriptors. For validation, we apply our method on tasks from the fields of image graph classification, shape correspondence and graph node classification, and show that it outperforms or pars state-of-the-art approaches while being significantly faster and having favorable properties like domain-independence. We propose filter banks in the graph spectral domain, where each filter is defined by a sum of sinusoidal waves. The main advantages of these filter banks are that (a) they have low approximation errors even if a lower-order shifted Chebyshev polynomial approximation is used, (b) the upper bound of the error after the @math th order Chebyshev polynomial approximation can be calculated rigorously without complex calculations, and (c) their parameters can be efficiently obtained from any real-valued linear phase finite impulse response filter banks in regular signal processing. The proposed filter bank has the same filter characteristics as the corresponding classical filter bank in the frequency domain and inherits the original properties, such as tight frame and no DC leakage. Furthermore, their approximation orders can be determined from the desired approximation accuracy. The effectiveness of our approach is evaluated by comparing them with existing spectral graph wavelets and filter banks. Convolution acts as a local feature extractor in convolutional neural networks (CNNs). However, the convolution operation is not applicable when the input data is supported on an irregular graph such as with social networks, citation networks, or knowledge graphs. This paper proposes the topology adaptive graph convolutional network (TAGCN), a novel graph convolutional network that generalizes CNN architectures to graph-structured data and provides a systematic way to design a set of fixed-size learnable filters to perform convolutions on graphs. The topologies of these filters are adaptive to the topology of the graph when they scan the graph to perform convolution, replacing the square filter for the grid-structured data in traditional CNNs. The outputs are the weighted sum of these filters’ outputs, extraction of both vertex features and strength of correlation between vertices. It can be used with both directed and undirected graphs. The proposed TAGCN not only inherits the properties of convolutions in CNN for grid-structured data, but it is also consistent with convolution as defined in graph signal processing. Further, as no approximation to the convolution is needed, TAGCN exhibits better performance than existing graph-convolution-approximation methods on a number of data sets. As only the polynomials of degree two of the adjacency matrix are used, TAGCN is also computationally simpler than other recent methods. We present a scalable approach for semi-supervised learning on graph-structured data that is based on an efficient variant of convolutional neural networks which operate directly on graphs. We motivate the choice of our convolutional architecture via a localized first-order approximation of spectral graph convolutions. Our model scales linearly in the number of graph edges and learns hidden layer representations that encode both local graph structure and features of nodes. In a number of experiments on citation networks and on a knowledge graph dataset we demonstrate that our approach outperforms related methods by a significant margin. Following the success of deep convolutional networks in various vision and speech related tasks, researchers have started investigating generalizations of the well-known technique for graph-structured data. A recently-proposed method called Graph Convolutional Networks has been able to achieve state-of-the-art results in the task of node classification. However, since the proposed method relies on localized first-order approximations of spectral graph convolutions, it is unable to capture higher-order interactions between nodes in the graph. In this work, we propose a motif-based graph attention model, called Motif Convolutional Networks (MCNs), which generalizes past approaches by using weighted multi-hop motif adjacency matrices to capture higher-order neighborhoods. A novel attention mechanism is used to allow each individual node to select the most relevant neighborhood to apply its filter. Experiments show that our proposed method is able to achieve state-of-the-art results on the semi-supervised node classification task. Many interesting problems in machine learning are being revisited with new deep learning tools. For graph-based semisupervised learning, a recent important development is graph convolutional networks (GCNs), which nicely integrate local vertex features and graph topology in the convolutional layers. Although the GCN model compares favorably with other state-of-the-art methods, its mechanisms are not clear and it still requires a considerable amount of labeled data for validation and model selection. In this paper, we develop deeper insights into the GCN model and address its fundamental limits. First, we show that the graph convolution of the GCN model is actually a special form of Laplacian smoothing, which is the key reason why GCNs work, but it also brings potential concerns of over-smoothing with many convolutional layers. Second, to overcome the limits of the GCN model with shallow architectures, we propose both co-training and self-training approaches to train GCNs. Our approaches significantly improve GCNs in learning with very few labels, and exempt them from requiring additional labels for validation. Extensive experiments on benchmarks have verified our theory and proposals. Abstract Documents in computer-readable form can be used to provide information about other documents, i.e. those they cite. To do this efficiently requires procedures for computer recognition of citing statements. This is not easy, especially for multi-sentence citing statements. Computer recognition procedures have been developed which are accurate to the following extent: 73 of the words in statements selected by computer procedures as being citing statements are words which are correctly attributable to the corresponding documents. The retrieval effectiveness of computer-recognized citing statements was tested in the following way. First, for eight retrieval requests in inorganiic chemistry, average recall by search of Chemical Abstracts Service indexing and Chemical Abstracts abstract text words was found to be 50 . Words from citing statements referring to the papers to be retrieved were then added to the index terms and abstract words as additional access points, and searching was repeated. Average recall increased to 70 . Only words from citing statements published within a year of the cited papers were used. The retrieval effect of citing statement words alone (published within a year) without index or abstract terms was the following: average recall was 40 . When just the words of the titles of the cited papers were added to those citing statement words, average recall increased to 50 . Graph signal processing deals with the processing of signals defined on irregular domains and is an emerging area of research. Graph filter banks allow the wavelet transform to be extended for processing graph signals. Sakiyama and Tanaka (2015) 22 recently proposed a technique to convert linear-phase biorthogonal filter banks for regular domain signals to biorthogonal graph filter banks. Perfect reconstruction is preserved using the technique but the resulting spectral filter functions are transcendental and not polynomial. Polynomial function filters are desired for the localization property and implementation efficiency. In this work we present alternative techniques to perform the conversion. Perfect reconstruction is preserved with the proposed techniques and the resulting spectral filters are polynomial functions. HighlightsWe design filter banks for signal defined over bipartite graphs.Spectral filters are polynomials resulting in localization and efficient implementation.Technique is based on converting 1D regular domain filter banks.Perfect reconstruction is exactly preserved and spectral response shape is almost preserved. In this paper, we study the problem of semantic annotation on 3D models that are represented as shape graphs. A functional view is taken to represent localized information on graphs, so that annotations such as part segment or keypoint are nothing but 0-1 indicator vertex functions. Compared with images that are 2D grids, shape graphs are irregular and non-isomorphic data structures. To enable the prediction of vertex functions on them by convolutional neural networks, we resort to spectral CNN method that enables weight sharing by parametrizing kernels in the spectral domain spanned by graph Laplacian eigenbases. Under this setting, our network, named SyncSpecCNN, strives to overcome two key challenges: how to share coefficients and conduct multi-scale analysis in different parts of the graph for a single shape, and how to share information across related but different shapes that may be represented by very different graphs. Towards these goals, we introduce a spectral parametrization of dilated convolutional kernels and a spectral transformer network. Experimentally we tested SyncSpecCNN on various tasks, including 3D shape part segmentation and keypoint prediction. State-of-the-art performance has been achieved on all benchmark datasets. A citing sentence is one that appears in a scientific article and cites previous work. Citing sentences have been studied and used in many applications. For example, they have been used in scientific paper summarization, automatic survey generation, paraphrase identification, and citation function classification. Citing sentences that cite multiple papers are common in scientific writing. This observation should be taken into consideration when using citing sentences in applications. For instance, when a citing sentence is used in a summary of a scientific paper, only the fragments of the sentence that are relevant to the summarized paper should be included in the summary. In this paper, we present and compare three different approaches for identifying the fragments of a citing sentence that are related to a given target reference. Our methods are: word classification, sequence labeling, and segment classification. Our experiments show that segment classification achieves the best results. Convolutional neural networks (CNNs) have achieved great success on grid-like data such as images, but face tremendous challenges in learning from more generic data such as graphs. In CNNs, the trainable local filters enable the automatic extraction of high-level features. The computation with filters requires a fixed number of ordered units in the receptive fields. However, the number of neighboring units is neither fixed nor are they ordered in generic graphs, thereby hindering the applications of convolutional operations. Here, we address these challenges by proposing the learnable graph convolutional layer (LGCL). LGCL automatically selects a fixed number of neighboring nodes for each feature based on value ranking in order to transform graph data into grid-like structures in 1-D format, thereby enabling the use of regular convolutional operations on generic graphs. To enable model training on large-scale graphs, we propose a sub-graph training method to reduce the excessive memory and computational resource requirements suffered by prior methods on graph convolutions. Our experimental results on node classification tasks in both transductive and inductive learning settings demonstrate that our methods can achieve consistently better performance on the Cora, Citeseer, Pubmed citation network, and protein-protein interaction network datasets. Our results also indicate that the proposed methods using sub-graph training strategy are more efficient as compared to prior approaches. Historically, papers have been physically bound to the journal in which they were published; but in the digital age papers are available individually, no longer tied to their respective journals. Hence, papers now can be read and cited based on their own merits, independently of the journal's physical availability, reputation, or impact factor (IF). We compare the strength of the relationship between journals' IFs and the actual citations received by their respective papers from 1902 to 2009. Throughout most of the 20th century, papers' citation rates were increasingly linked to their respective journals' IFs. However, since 1990, the advent of the digital age, the relation between IFs and paper citations has been weakening. This began first in physics, a field that was quick to make the transition into the electronic domain. Furthermore, since 1990 the overall proportion of highly cited papers coming from highly cited journals has been decreasing and, of these highly cited papers, the proportion not coming from highly cited journals has been increasing. Should this pattern continue, it might bring an end to the use of the IF as a way to evaluate the quality of journals, papers, and researchers. © 2012 Wiley Periodicals, Inc. With the tremendous amount of research publications, recommending relevant papers to researchers to fulfill their information need becomes a significant problem. The major challenge to be tackled by our work is that given a target paper, how to effectively recommend a set of relevant papers from an existing citation network. In this paper, we propose a novel method to address the problem by incorporating various citation relations for a proper set of papers, which are more relevant but with a very limited size. The proposed method has two unique properties. Firstly, a metric called Local Relation Strength is defined to measure the dependency between cited and citing papers. Secondly, a model called Global Relation Strength is proposed to capture the relevance between two papers in the whole citation graph. We evaluate our proposed model on a real-world publication dataset and conduct an extensive comparison with the state-of-the-art baseline methods. The experimental results demonstrate that our method can have a promising improvement over the state-of-the-art techniques. We propose a method for learning dictionaries towards sparse approximation of signals defined on vertices of arbitrary graphs. Dictionaries are expected to describe effectively the main spatial and spectral components of the signals of interest, so that their structure is dependent on the graph information and its spectral representation. We first show how operators can be defined for capturing different spectral components of signals on graphs. We then propose a dictionary learning algorithm built on a sparse approximation step and a dictionary update function, which iteratively leads to adapting the structured dictionary to the class of target signals. Experimental results on synthetic and natural signals on graphs demonstrate the efficiency of the proposed algorithm both in terms of sparse approximation and support recovery performance. A new form of document coupling called co-citation is defined as the frequency with which two documents are cited together. The co-citation frequency of two scientific papers can be determined by comparing lists of citing documents in the Science Citation Index and counting identical entries. Networks of co-cited papers can be generated for specific scientific specialties, and an example is drawn from the literature of particle physics. Co-citation patterns are found to differ significantly from bibliographic coupling patterns, but to agree generally with patterns of direct citation. Clusters of co-cited papers provide a new way to study the specialty structure of science. They may provide a new approach to indexing and to the creation of SDI profiles. Patent prior art search is a type of search in the patent domain where documents are searched for that describe the work previously carried out related to a patent application. The goal of this search is to check whether the idea in the patent application is novel. Vocabulary mismatch is one of the main problems of patent retrieval which results in low retrievability of similar documents for a given patent application. In this paper we show how the term distribution of the cited documents in an initially retrieved ranked list can be used to address the vocabulary mismatch. We propose a method for query modeling estimation which utilizes the citation links in a pseudo relevance feedback set. We first build a topic dependent citation graph, starting from the initially retrieved set of feedback documents and utilizing citation links of feedback documents to expand the set. We identify the important documents in the topic dependent citation graph using a citation analysis measure. We then use the term distribution of the documents in the citation graph to estimate a query model by identifying the distinguishing terms and their respective weights. We then use these terms to expand our original query. We use CLEF-IP 2011 collection to evaluate the effectiveness of our query modeling approach for prior art search. We also study the influence of different parameters on the performance of the proposed method. The experimental results demonstrate that the proposed approach significantly improves the recall over a state-of-the-art baseline which uses the link-based structure of the citation graph but not the term distribution of the cited documents.