In this paper, we consider a class of constrained clustering problems of points in @math , where @math could be rather high. A common feature of these problems is that their optimal clusterings no longer have the locality property (due to the additional constraints), which is a key property required by many algorithms for their unconstrained counterparts. To overcome the difficulty caused by the loss of locality, we present in this paper a unified framework, called Peeling-and-Enclosing (PnE) , to iteratively solve two variants of the constrained clustering problems, constrained @math -means clustering ( @math -CMeans) and constrained @math -median clustering ( @math -CMedian). Our framework is based on two standalone geometric techniques, called Simplex Lemma and Weaker Simplex Lemma , for @math -CMeans and @math -CMedian, respectively. The simplex lemma (or weaker simplex lemma) enables us to efficiently approximate the mean (or median) point of an unknown set of points by searching a small-size grid, independent of the dimensionality of the space, in a simplex (or the surrounding region of a simplex), and thus can be used to handle high dimensional data. If @math and @math are fixed numbers, our framework generates, in nearly linear time ( i.e., @math ), @math @math -tuple candidates for the @math mean or median points, and one of them induces a @math -approximation for @math -CMeans or @math -CMedian, where @math is the number of points. Combining this unified framework with a problem-specific selection algorithm (which determines the best @math -tuple candidate), we obtain a @math -approximation for each of the constrained clustering problems. We expect that our technique will be applicable to other constrained clustering problems without locality.
Besides the traditional clustering models, Balcan considered the problem of finding the clustering with small difference from the unknown ground truth @cite_29 @cite_33 .
@cite_29 @cite_33
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A new form of document coupling called co-citation is defined as the frequency with which two documents are cited together. The co-citation frequency of two scientific papers can be determined by comparing lists of citing documents in the Science Citation Index and counting identical entries. Networks of co-cited papers can be generated for specific scientific specialties, and an example is drawn from the literature of particle physics. Co-citation patterns are found to differ significantly from bibliographic coupling patterns, but to agree generally with patterns of direct citation. Clusters of co-cited papers provide a new way to study the specialty structure of science. They may provide a new approach to indexing and to the creation of SDI profiles. Purpose – The purpose of this paper is to suggest an alternative to the widely used Times Cited criterion for analysing citation networks. The approach involves taking account of the natures of the papers that cite a given paper, so as to differentiate between papers that attract the same number of citations.Design methodology approach – ArticleRank is an algorithm that has been derived from Google's PageRank algorithm to measure the influence of journal articles. ArticleRank is applied to two datasets – a citation network based on an early paper on webometrics, and a self‐citation network based on the 19 most cited papers in the Journal of Documentation – using citation data taken from the Web of Knowledge database.Findings – ArticleRank values provide a different ranking of a set of papers from that provided by the corresponding Times Cited values, and overcomes the inability of the latter to differentiate between papers with the same numbers of citations. The difference in rankings between Times Cited ... A common approach for solving clustering problems is to design algorithms to approximately optimize various objective functions (e.g., k-means or min-sum) defined in terms of some given pairwise distance or similarity information. However, in many learning motivated clustering applications (such as clustering proteins by function) there is some unknown target clustering; in such cases the pairwise information is merely based on heuristics and the real goal is to achieve low error on the data. In these settings, an arbitrary c-approximation algorithm for some objective would work well only if any c-approximation to that objective is close to the target clustering. In recent work, Balcan et. al [7] have shown how both for the k-means and k-median objectives this property allows one to produce clusterings of low error, even for values c such that getting a c-approximation to these objective functions is provably NP-hard. In this paper we analyze the min-sum objective from this perspective. While [7] also considered the min-sum problem, the results they derived for this objective were substantially weaker. In this work we derive new and more subtle structural properties for min-sum in this context and use these to design efficient algorithms for producing accurate clusterings, both in the transductive and in the inductive case. We also analyze the correlation clustering problem from this perspective, and point out interesting differences between this objective and k-median, k-means, or min-sum objectives. Allan Bloom's cytologic epistemology invites further analysis. A scientific article is like a cell that interacts with its neighbors to form an organ-like cluster—a set of articles or a "literature" addressed to a common set of problems and topics. These articles interact by citing one another—by conversing in print. The clusters themselves can be seen as interacting, to varying degrees, with other clusters. This essay will focus on certain failures of intercluster communication. Problems of clustering data from pairwise similarity information are ubiquitous in Computer Science. Theoretical treatments typically view the similarity information as ground-truth and then design algorithms to (approximately) optimize various graph-based objective functions. However, in most applications, this similarity information is merely based on some heuristic; the ground truth is really the unknown correct clustering of the data points and the real goal is to achieve low error on the data. In this work, we develop a theoretical approach to clustering from this perspective. In particular, motivated by recent work in learning theory that asks "what natural properties of a similarity (or kernel) function are sufficient to be able to learn well?" we ask "what natural properties of a similarity function are sufficient to be able to cluster well?" To study this question we develop a theoretical framework that can be viewed as an analog of the PAC learning model for clustering, where the object of study, rather than being a concept class, is a class of (concept, similarity function) pairs, or equivalently, a property the similarity function should satisfy with respect to the ground truth clustering. We then analyze both algorithmic and information theoretic issues in our model. While quite strong properties are needed if the goal is to produce a single approximately-correct clustering, we find that a number of reasonable properties are sufficient under two natural relaxations: (a) list clustering: analogous to the notion of list-decoding, the algorithm can produce a small list of clusterings (which a user can select from) and (b) hierarchical clustering: the algorithm's goal is to produce a hierarchy such that desired clustering is some pruning of this tree (which a user could navigate). We develop a notion of the clustering complexity of a given property (analogous to notions of capacity in learning theory), that characterizes its information-theoretic usefulness for clustering. We analyze this quantity for several natural game-theoretic and learning-theoretic properties, as well as design new efficient algorithms that are able to take advantage of them. Our algorithms for hierarchical clustering combine recent learning-theoretic approaches with linkage-style methods. We also show how our algorithms can be extended to the inductive case, i.e., by using just a constant-sized sample, as in property testing. The analysis here uses regularity-type results of [FK] and [AFKK]. Search algorithms incorporating some form of topic model have a long history in information retrieval. For example, cluster-based retrieval has been studied since the 60s and has recently produced good results in the language model framework. An approach to building topic models based on a formal generative model of documents, Latent Dirichlet Allocation (LDA), is heavily cited in the machine learning literature, but its feasibility and effectiveness in information retrieval is mostly unknown. In this paper, we study how to efficiently use LDA to improve ad-hoc retrieval. We propose an LDA-based document model within the language modeling framework, and evaluate it on several TREC collections. Gibbs sampling is employed to conduct approximate inference in LDA and the computational complexity is analyzed. We show that improvements over retrieval using cluster-based models can be obtained with reasonable efficiency. In a document network such as a citation network of scientific documents, web-logs, etc., the content produced by authors exhibits their interest in certain topics. In addition some authors influence other authors' interests. In this work, we propose to model the influence of cited authors along with the interests of citing authors. Moreover, we hypothesize that apart from the citations present in documents, the context surrounding the citation mention provides extra topical information about the cited authors. However, associating terms in the context to the cited authors remains an open problem. We propose novel document generation schemes that incorporate the context while simultaneously modeling the interests of citing authors and influence of the cited authors. Our experiments show significant improvements over baseline models for various evaluation criteria such as link prediction between document and cited author, and quantitatively explaining unseen text. A model is presented of the manifestation of the birth and development of a scientific specialty in a collection of journal papers. The proposed model, Cumulative Advantage by Paper with Exemplars (CAPE) is an adaptation of Price's cumulative advantage model (D. Price, [1976]. Two modifications are made: (a) references are cited in groups by paper, and (b) the model accounts for the generation of highly cited exemplar references immediately after the birth of the specialty. This simple growth process mimics many characteristic features of real collections of papers, including the structure of the paper-to-reference matrix, the reference-per-paper distribution, the paper-per-reference distribution, the bibliographic coupling distribution, the cocitation distribution, the bibliographic coupling clustering coefficient distribution, and the temporal distribution of exemplar references. The model yields a great deal of insight into the process that produces the connectedness and clustering of a collection of articles and references. Two examples are presented and successfully modeled: a collection of 131 articles on MEMS RF (microelectromechnical systems radio frequency) switches, and a collection of 901 articles on the subject of complex networks. © 2005 Wiley Periodicals, Inc. In recent years scholars have built maps of science by connecting the academic fields that cite each other, are cited together, or that cite a similar literature. But since scholars cannot always publish in the fields they cite, or that cite them, these science maps are only rough proxies for the potential of a scholar, organization, or country, to enter a new academic field. Here we use a large dataset of scholarly publications disambiguated at the individual level to create a map of science-or research space-where links connect pairs of fields based on the probability that an individual has published in both of them. We find that the research space is a significantly more accurate predictor of the fields that individuals and organizations will enter in the future than citation based science maps. At the country level, however, the research space and citations based science maps are equally accurate. These findings show that data on career trajectories-the set of fields that individuals have previously published in-provide more accurate predictors of future research output for more focalized units-such as individuals or organizations-than citation based science maps. A citing sentence is one that appears in a scientific article and cites previous work. Citing sentences have been studied and used in many applications. For example, they have been used in scientific paper summarization, automatic survey generation, paraphrase identification, and citation function classification. Citing sentences that cite multiple papers are common in scientific writing. This observation should be taken into consideration when using citing sentences in applications. For instance, when a citing sentence is used in a summary of a scientific paper, only the fragments of the sentence that are relevant to the summarized paper should be included in the summary. In this paper, we present and compare three different approaches for identifying the fragments of a citing sentence that are related to a given target reference. Our methods are: word classification, sequence labeling, and segment classification. Our experiments show that segment classification achieves the best results. Abstract Documents in computer-readable form can be used to provide information about other documents, i.e. those they cite. To do this efficiently requires procedures for computer recognition of citing statements. This is not easy, especially for multi-sentence citing statements. Computer recognition procedures have been developed which are accurate to the following extent: 73 of the words in statements selected by computer procedures as being citing statements are words which are correctly attributable to the corresponding documents. The retrieval effectiveness of computer-recognized citing statements was tested in the following way. First, for eight retrieval requests in inorganiic chemistry, average recall by search of Chemical Abstracts Service indexing and Chemical Abstracts abstract text words was found to be 50 . Words from citing statements referring to the papers to be retrieved were then added to the index terms and abstract words as additional access points, and searching was repeated. Average recall increased to 70 . Only words from citing statements published within a year of the cited papers were used. The retrieval effect of citing statement words alone (published within a year) without index or abstract terms was the following: average recall was 40 . When just the words of the titles of the cited papers were added to those citing statement words, average recall increased to 50 . Logarithmic spirals are conjectured to be optimal escape paths from a half plane ocean. Assuming this, we find the rate of increase for both min-max and min-mean interpretations of optimal''. For the one-dimensional analog, which we call logarithmic coils, our min-mean solution differs from a widely-cited published account. Abstract This paper establishes the consistency of spectral approaches to data clustering. We consider clustering of point clouds obtained as samples of a ground-truth measure. A graph representing the point cloud is obtained by assigning weights to edges based on the distance between the points they connect. We investigate the spectral convergence of both unnormalized and normalized graph Laplacians towards the appropriate operators in the continuum domain. We obtain sharp conditions on how the connectivity radius can be scaled with respect to the number of sample points for the spectral convergence to hold. We also show that the discrete clusters obtained via spectral clustering converge towards a continuum partition of the ground truth measure. Such continuum partition minimizes a functional describing the continuum analogue of the graph-based spectral partitioning. Our approach, based on variational convergence, is general and flexible. Given a point set S and an unknown metric d on S, we study the problem of efficiently partitioning S into k clusters while querying few distances between the points. In our model we assume that we have access to one versus all queries that given a point s ∈ S return the distances between s and all other points. We show that given a natural assumption about the structure of the instance, we can efficiently find an accurate clustering using only O(k) distance queries. Our algorithm uses an active selection strategy to choose a small set of points that we call landmarks, and considers only the distances between landmarks and other points to produce a clustering. We use our procedure to cluster proteins by sequence similarity. This setting nicely fits our model because we can use a fast sequence database search program to query a sequence against an entire data set. We conduct an empirical study that shows that even though we query a small fraction of the distances between the points, we produce clusterings that are close to a desired clustering given by manual classification. Scholars are increasingly citing electronic “web references” which are not preserved in libraries or full text archives. WebCite is a new standard for citing web references. To “webcite” a document involves archiving the cited Web page through www.webcitation.org and citing the WebCite permalink instead of (or in addition to) the unstable live Web page. This journal has amended its “instructions for authors” accordingly, asking authors to archive cited Web pages before submitting a manuscript. Almost 200 other journals are already using the system. We discuss the rationale for WebCite, its technology, and how scholars, editors, and publishers can benefit from the service. Citing scholars initiate an archiving process of all cited Web references, ideally before they submit a manuscript. Authors of online documents and websites which are expected to be cited by others can ensure that their work is permanently available by creating an archived copy using WebCite and providing the citation information including the WebCite link on their Web document(s). Editors should ask their authors to cache all cited Web addresses (Uniform Resource Locators, or URLs) “prospectively” before submitting their manuscripts to their journal. Editors and publishers should also instruct their copyeditors to cache cited Web material if the author has not done so already. Finally, WebCite can process publisher submitted “citing articles” (submitted for example as eXtensible Markup Language [XML] documents) to automatically archive all cited Web pages shortly before or on publication. Finally, WebCite can act as a focussed crawler, caching retrospectively references of already published articles. Copyright issues are addressed by honouring respective Internet standards (robot exclusion files, no-cache and no-archive tags). Long-term preservation is ensured by agreements with libraries and digital preservation organizations. The resulting WebCite Index may also have applications for research assessment exercises, being able to measure the impact of Web services and published Web documents through access and Web citation metrics. @PARASPLIT [J Med Internet Res 2005;7(5):e60] The old Asian legend about the blind men and the elephant comes to mind when looking at how different authors of scientific papers describe a piece of related prior work. It turns out that different citations to the same paper often focus on different aspects of that paper and that neither provides a full description of its full set of contributions. In this article, we will describe our investigation of this phenomenon. We studied citation summaries in the context of research papers in the biomedical domain. A citation summary is the set of citing sentences for a given article and can be used as a surrogate for the actual article in a variety of scenarios. It contains information that was deemed by peers to be important. Our study shows that citation summaries overlap to some extent with the abstracts of the papers and that they also differ from them in that they focus on different aspects of these papers than do the abstracts. In addition to this, co-cited articles (which are pairs of articles cited by another article) tend to be similar. We show results based on a lexical similarity metric called cohesion to justify our claims. © 2008 Wiley Periodicals, Inc. An overwhelming number of news articles are available every day via the internet. Unfortunately, it is impossible for us to peruse more than a handful; furthermore it is difficult to ascertain an article’s social context, i.e., is it popular, what sorts of people are reading it, etc. In this paper, we develop a system to address this problem in the restricted domain of political news by harnessing implicit and explicit contextual information from the blogosphere. Specifically, we track thousands of blogs and the news articles they cite, collapsing news articles that have highly overlapping content. We then tag each article with the number of blogs citing it, the political orientation of those blogs, and the level of emotional charge expressed in the blog posts that link to the news article. We summarize and present the results to the user via a novel visualization which displays this contextual information; the user can then find the most popular articles, the articles most cited by liberals, the articles most emotionally discussed in the political blogosphere, etc. Image clustering is a crucial but challenging task in machine learning and computer vision. Existing methods often ignore the combination between feature learning and clustering. To tackle this problem, we propose Deep Adaptive Clustering (DAC) that recasts the clustering problem into a binary pairwise-classification framework to judge whether pairs of images belong to the same clusters. In DAC, the similarities are calculated as the cosine distance between label features of images which are generated by a deep convolutional network (ConvNet). By introducing a constraint into DAC, the learned label features tend to be one-hot vectors that can be utilized for clustering images. The main challenge is that the ground-truth similarities are unknown in image clustering. We handle this issue by presenting an alternating iterative Adaptive Learning algorithm where each iteration alternately selects labeled samples and trains the ConvNet. Conclusively, images are automatically clustered based on the label features. Experimental results show that DAC achieves state-of-the-art performance on five popular datasets, e.g., yielding 97.75 clustering accuracy on MNIST, 52.18 on CIFAR-10 and 46.99 on STL-10. We consider the model introduced by Bilu and Linial (2010), who study problems for which the optimal clustering does not change when distances are perturbed. They show that even when a problem is NP-hard, it is sometimes possible to obtain efficient algorithms for instances resilient to certain multiplicative perturbations, e.g. on the order of @math for max-cut clustering. (2010) consider center-based objectives, and Balcan and Liang (2011) analyze the @math -median and min-sum objectives, giving efficient algorithms for instances resilient to certain constant multiplicative perturbations. Here, we are motivated by the question of to what extent these assumptions can be relaxed while allowing for efficient algorithms. We show there is little room to improve these results by giving NP-hardness lower bounds for both the @math -median and min-sum objectives. On the other hand, we show that constant multiplicative resilience parameters can be so strong as to make the clustering problem trivial, leaving only a narrow range of resilience parameters for which clustering is interesting. We also consider a model of additive perturbations and give a correspondence between additive and multiplicative notions of stability. Our results provide a close examination of the consequences of assuming stability in data. Historically, papers have been physically bound to the journal in which they were published; but in the digital age papers are available individually, no longer tied to their respective journals. Hence, papers now can be read and cited based on their own merits, independently of the journal's physical availability, reputation, or impact factor (IF). We compare the strength of the relationship between journals' IFs and the actual citations received by their respective papers from 1902 to 2009. Throughout most of the 20th century, papers' citation rates were increasingly linked to their respective journals' IFs. However, since 1990, the advent of the digital age, the relation between IFs and paper citations has been weakening. This began first in physics, a field that was quick to make the transition into the electronic domain. Furthermore, since 1990 the overall proportion of highly cited papers coming from highly cited journals has been decreasing and, of these highly cited papers, the proportion not coming from highly cited journals has been increasing. Should this pattern continue, it might bring an end to the use of the IF as a way to evaluate the quality of journals, papers, and researchers. © 2012 Wiley Periodicals, Inc.