Network embedding aims to learn the low-dimensional representations of vertexes in a network, while structure and inherent properties of the network is preserved. Existing network embedding works primarily focus on preserving the microscopic structure, such as the first- and second-order proximity of vertexes, while the macroscopic scale-free property is largely ignored. Scale-free property depicts the fact that vertex degrees follow a heavy-tailed distribution (i.e., only a few vertexes have high degrees) and is a critical property of real-world networks, such as social networks. In this paper, we study the problem of learning representations for scale-free networks. We first theoretically analyze the difficulty of embedding and reconstructing a scale-free network in the Euclidean space, by converting our problem to the sphere packing problem. Then, we propose the "degree penalty" principle for designing scale-free property preserving network embedding algorithm: punishing the proximity between high-degree vertexes. We introduce two implementations of our principle by utilizing the spectral techniques and a skip-gram model respectively. Extensive experiments on six datasets show that our algorithms are able to not only reconstruct heavy-tailed distributed degree distribution, but also outperform state-of-the-art embedding models in various network mining tasks, such as vertex classification and link prediction.
Network embedding aims to learn representations for vertexes in a given network. Some researchers regard network embedding as part of dimensionality reduction techniques. For example, Laplacian Eigenmaps (LE) @cite_17 aims to learn the vertex representation to expand the manifold where the data lie. As a variant of LE, Locality Preserving Projections (LPP) @cite_4 learns a linear projection from feature space to embedding space. Besides, there are other linear @cite_21 and non-linear @cite_13 network embedding algorithms for dimensionality reduction. Recent network embedding works take advancements in natural language processing, most notably models known as word2vec @cite_34 , which learns the distributed representations of words. Building on word2vec, define a vertex's context'' by their co-occurrence in a random walk path @cite_1 . More recently, propose a mixture of width-first and breadth-first search based procedure to generate paths of vertexes @cite_14 . further develop the model to handle heterogeneous networks @cite_16 . LINE @cite_40 decomposes a vertex's context into first-order (neighbors) and second-order (two-degree neighbors) proximity. preserve community information in their vertex representations @cite_5 . However, all of above methods focus on preserving microscopic network structure and ignore macroscopic scale-free property of networks.
@cite_14 @cite_4 @cite_21 @cite_1 @cite_16 @cite_40 @cite_5 @cite_34 @cite_13 @cite_17
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Many problems in information processing involve some form of dimensionality reduction. In this paper, we introduce Locality Preserving Projections (LPP). These are linear projective maps that arise by solving a variational problem that optimally preserves the neighborhood structure of the data set. LPP should be seen as an alternative to Principal Component Analysis (PCA) – a classical linear technique that projects the data along the directions of maximal variance. When the high dimensional data lies on a low dimensional manifold embedded in the ambient space, the Locality Preserving Projections are obtained by finding the optimal linear approximations to the eigenfunctions of the Laplace Beltrami operator on the manifold. As a result, LPP shares many of the data representation properties of nonlinear techniques such as Laplacian Eigenmaps or Locally Linear Embedding. Yet LPP is linear and more crucially is defined everywhere in ambient space rather than just on the training data points. This is borne out by illustrative examples on some high dimensional data sets. Heterogenous information network embedding aims to embed heterogenous information networks (HINs) into low dimensional spaces, in which each vertex is represented as a low-dimensional vector, and both global and local network structures in the original space are preserved. However, most of existing heterogenous information network embedding models adopt the dot product to measure the proximity in the low dimensional space, and thus they can only preserve the first-order proximity and are insufficient to capture the global structure. Compared with homogenous information networks, there are multiple types of links (i.e., multiple relations) in HINs, and the link distribution w.r.t relations is highly skewed. To address the above challenging issues, we propose a novel heterogenous information network embedding model PME based on the metric learning to capture both first-order and second-order proximities in a unified way. To alleviate the potential geometrical inflexibility of existing metric learning approaches, we propose to build object and relation embeddings in separate object space and relation spaces rather than in a common space. Afterwards, we learn embeddings by firstly projecting vertices from object space to corresponding relation space and then calculate the proximity between projected vertices. To overcome the heavy skewness of the link distribution w.r.t relations and avoid "over-sampling'' or "under-sampling'' for each relation, we propose a novel loss-aware adaptive sampling approach for the model optimization. Extensive experiments have been conducted on a large-scale HIN dataset, and the experimental results show superiority of our proposed PME model in terms of prediction accuracy and scalability. Network embedding is an important method to learn low-dimensional representations of vertexes in networks, aiming to capture and preserve the network structure. Almost all the existing network embedding methods adopt shallow models. However, since the underlying network structure is complex, shallow models cannot capture the highly non-linear network structure, resulting in sub-optimal network representations. Therefore, how to find a method that is able to effectively capture the highly non-linear network structure and preserve the global and local structure is an open yet important problem. To solve this problem, in this paper we propose a Structural Deep Network Embedding method, namely SDNE. More specifically, we first propose a semi-supervised deep model, which has multiple layers of non-linear functions, thereby being able to capture the highly non-linear network structure. Then we propose to exploit the first-order and second-order proximity jointly to preserve the network structure. The second-order proximity is used by the unsupervised component to capture the global network structure. While the first-order proximity is used as the supervised information in the supervised component to preserve the local network structure. By jointly optimizing them in the semi-supervised deep model, our method can preserve both the local and global network structure and is robust to sparse networks. Empirically, we conduct the experiments on five real-world networks, including a language network, a citation network and three social networks. The results show that compared to the baselines, our method can reconstruct the original network significantly better and achieves substantial gains in three applications, i.e. multi-label classification, link prediction and visualization. Abstract Documents in computer-readable form can be used to provide information about other documents, i.e. those they cite. To do this efficiently requires procedures for computer recognition of citing statements. This is not easy, especially for multi-sentence citing statements. Computer recognition procedures have been developed which are accurate to the following extent: 73 of the words in statements selected by computer procedures as being citing statements are words which are correctly attributable to the corresponding documents. The retrieval effectiveness of computer-recognized citing statements was tested in the following way. First, for eight retrieval requests in inorganiic chemistry, average recall by search of Chemical Abstracts Service indexing and Chemical Abstracts abstract text words was found to be 50 . Words from citing statements referring to the papers to be retrieved were then added to the index terms and abstract words as additional access points, and searching was repeated. Average recall increased to 70 . Only words from citing statements published within a year of the cited papers were used. The retrieval effect of citing statement words alone (published within a year) without index or abstract terms was the following: average recall was 40 . When just the words of the titles of the cited papers were added to those citing statement words, average recall increased to 50 . In a document network such as a citation network of scientific documents, web-logs, etc., the content produced by authors exhibits their interest in certain topics. In addition some authors influence other authors' interests. In this work, we propose to model the influence of cited authors along with the interests of citing authors. Moreover, we hypothesize that apart from the citations present in documents, the context surrounding the citation mention provides extra topical information about the cited authors. However, associating terms in the context to the cited authors remains an open problem. We propose novel document generation schemes that incorporate the context while simultaneously modeling the interests of citing authors and influence of the cited authors. Our experiments show significant improvements over baseline models for various evaluation criteria such as link prediction between document and cited author, and quantitatively explaining unseen text. Scholars are increasingly citing electronic “web references” which are not preserved in libraries or full text archives. WebCite is a new standard for citing web references. To “webcite” a document involves archiving the cited Web page through www.webcitation.org and citing the WebCite permalink instead of (or in addition to) the unstable live Web page. This journal has amended its “instructions for authors” accordingly, asking authors to archive cited Web pages before submitting a manuscript. Almost 200 other journals are already using the system. We discuss the rationale for WebCite, its technology, and how scholars, editors, and publishers can benefit from the service. Citing scholars initiate an archiving process of all cited Web references, ideally before they submit a manuscript. Authors of online documents and websites which are expected to be cited by others can ensure that their work is permanently available by creating an archived copy using WebCite and providing the citation information including the WebCite link on their Web document(s). Editors should ask their authors to cache all cited Web addresses (Uniform Resource Locators, or URLs) “prospectively” before submitting their manuscripts to their journal. Editors and publishers should also instruct their copyeditors to cache cited Web material if the author has not done so already. Finally, WebCite can process publisher submitted “citing articles” (submitted for example as eXtensible Markup Language [XML] documents) to automatically archive all cited Web pages shortly before or on publication. Finally, WebCite can act as a focussed crawler, caching retrospectively references of already published articles. Copyright issues are addressed by honouring respective Internet standards (robot exclusion files, no-cache and no-archive tags). Long-term preservation is ensured by agreements with libraries and digital preservation organizations. The resulting WebCite Index may also have applications for research assessment exercises, being able to measure the impact of Web services and published Web documents through access and Web citation metrics. @PARASPLIT [J Med Internet Res 2005;7(5):e60] Citation relationship between scientific publications has been successfully used for scholarly bibliometrics, information retrieval and data mining tasks, and citation-based recommendation algorithms are well documented. While previous studies investigated citation relations from various viewpoints, most of them share the same assumption that, if paper1 cites paper2 (or author1 cites author2), they are connected, regardless of citation importance, sentiment, reason, topic, or motivation. However, this assumption is oversimplified. In this study, we employ an innovative "context-rich heterogeneous network" approach, which paves a new way for citation recommendation task. In the network, we characterize 1) the importance of citation relationships between citing and cited papers, and 2) the topical citation motivation. Unlike earlier studies, the citation information, in this paper, is characterized by citation textual contexts extracted from the full-text citing paper. We also propose algorithm to cope with the situation when large portion of full-text missing information exists in the bibliographic repository. Evaluation results show that, context-rich heterogeneous network can significantly enhance the citation recommendation performance. Network embedding, aiming to learn the low-dimensional representations of nodes in networks, is of paramount importance in many real applications. One basic requirement of network embedding is to preserve the structure and inherent properties of the networks. While previous network embedding methods primarily preserve the microscopic structure, such as the first- and second-order proximities of nodes, the mesoscopic community structure, which is one of the most prominent feature of networks, is largely ignored. In this paper, we propose a novel Modularized Nonnegative Matrix Factorization (M-NMF) model to incorporate the community structure into network embedding. We exploit the consensus relationship between the representations of nodes and community structure, and then jointly optimize NMF based representation learning model and modularity based community detection model in a unified framework, which enables the learned representations of nodes to preserve both of the microscopic and community structures. We also provide efficient updating rules to infer the parameters of our model, together with the correctness and convergence guarantees. Extensive experimental results on a variety of real-world networks show the superior performance of the proposed method over the state-of-the-arts. Network embedding methodologies, which learn a distributed vector representation for each vertex in a network, have attracted considerable interest in recent years. Existing works have demonstrated that vertex representation learned through an embedding method provides superior performance in many real-world applications, such as node classification, link prediction, and community detection. However, most of the existing methods for network embedding only utilize topological information of a vertex, ignoring a rich set of nodal attributes (such as, user profiles of an online social network, or textual contents of a citation network), which is abundant in all real-life networks. A joint network embedding that takes into account both attributional and relational information entails a complete network information and could further enrich the learned vector representations. In this work, we present Neural-Brane, a novel Neural Bayesian Personalized Ranking based Attributed Network Embedding. For a given network, Neural-Brane extracts latent feature representation of its vertices using a designed neural network model that unifies network topological information and nodal attributes; Besides, it utilizes Bayesian personalized ranking objective, which exploits the proximity ordering between a similar node-pair and a dissimilar node-pair. We evaluate the quality of vertex embedding produced by Neural-Brane by solving the node classification and clustering tasks on four real-world datasets. Experimental results demonstrate the superiority of our proposed method over the state-of-the-art existing methods. This work develops a representation learning method for bipartite networks. While existing works have developed various embedding methods for network data, they have primarily focused on homogeneous networks in general and overlooked the special properties of bipartite networks. As such, these methods can be suboptimal for embedding bipartite networks. In this paper, we propose a new method named BiNE, short for Bipartite Network Embedding, to learn the vertex representations for bipartite networks. By performing biased random walks purposefully, we generate vertex sequences that can well preserve the long-tail distribution of vertices in the original bipartite network. We then propose a novel optimization framework by accounting for both the explicit relations (i.e., observed links) and implicit relations (i.e., unobserved but transitive links) in learning the vertex representations. We conduct extensive experiments on several real datasets covering the tasks of link prediction (classification), recommendation (personalized ranking), and visualization. Both quantitative results and qualitative analysis verify the effectiveness and rationality of our BiNE method. Purpose – The purpose of this paper is to suggest an alternative to the widely used Times Cited criterion for analysing citation networks. The approach involves taking account of the natures of the papers that cite a given paper, so as to differentiate between papers that attract the same number of citations.Design methodology approach – ArticleRank is an algorithm that has been derived from Google's PageRank algorithm to measure the influence of journal articles. ArticleRank is applied to two datasets – a citation network based on an early paper on webometrics, and a self‐citation network based on the 19 most cited papers in the Journal of Documentation – using citation data taken from the Web of Knowledge database.Findings – ArticleRank values provide a different ranking of a set of papers from that provided by the corresponding Times Cited values, and overcomes the inability of the latter to differentiate between papers with the same numbers of citations. The difference in rankings between Times Cited ... A citing sentence is one that appears in a scientific article and cites previous work. Citing sentences have been studied and used in many applications. For example, they have been used in scientific paper summarization, automatic survey generation, paraphrase identification, and citation function classification. Citing sentences that cite multiple papers are common in scientific writing. This observation should be taken into consideration when using citing sentences in applications. For instance, when a citing sentence is used in a summary of a scientific paper, only the fragments of the sentence that are relevant to the summarized paper should be included in the summary. In this paper, we present and compare three different approaches for identifying the fragments of a citing sentence that are related to a given target reference. Our methods are: word classification, sequence labeling, and segment classification. Our experiments show that segment classification achieves the best results. Graph Embedding methods are aimed at mapping each vertex into a low dimensional vector space, which preserves certain structural relationships among the vertices in the original graph. Recently, several works have been proposed to learn embeddings based on sampled paths from the graph, e.g., DeepWalk, Line, Node2Vec. However, their methods only preserve symmetric proximities, which could be insufficient in many applications, even the underlying graph is undirected. Besides, they lack of theoretical analysis of what exactly the relationships they preserve in their embedding space. In this paper, we propose an asymmetric proximity preserving (APP) graph embedding method via random walk with restart, which captures both asymmetric and high-order similarities between node pairs. We give theoretical analysis that our method implicitly preserves the Rooted PageRank score for any two vertices. We conduct extensive experiments on tasks of link prediction and node recommendation on open source datasets, as well as online recommendation services in Alibaba Group, in which the training graph has over 290 million vertices and 18 billion edges, showing our method to be highly scalable and effective. Neural embeddings have been used with great success in Natural Language Processing (NLP). They provide compact representations that encapsulate word similarity and attain state-of-the-art performance in a range of linguistic tasks. The success of neural embeddings has prompted significant amounts of research into applications in domains other than language. One such domain is graph-structured data, where embeddings of vertices can be learned that encapsulate vertex similarity and improve performance on tasks including edge prediction and vertex labelling. For both NLP and graph based tasks, embeddings have been learned in high-dimensional Euclidean spaces. However, recent work has shown that the appropriate isometric space for embedding complex networks is not the flat Euclidean space, but negatively curved, hyperbolic space. We present a new concept that exploits these recent insights and propose learning neural embeddings of graphs in hyperbolic space. We provide experimental evidence that embedding graphs in their natural geometry significantly improves performance on downstream tasks for several real-world public datasets. A new form of document coupling called co-citation is defined as the frequency with which two documents are cited together. The co-citation frequency of two scientific papers can be determined by comparing lists of citing documents in the Science Citation Index and counting identical entries. Networks of co-cited papers can be generated for specific scientific specialties, and an example is drawn from the literature of particle physics. Co-citation patterns are found to differ significantly from bibliographic coupling patterns, but to agree generally with patterns of direct citation. Clusters of co-cited papers provide a new way to study the specialty structure of science. They may provide a new approach to indexing and to the creation of SDI profiles. In recent years scholars have built maps of science by connecting the academic fields that cite each other, are cited together, or that cite a similar literature. But since scholars cannot always publish in the fields they cite, or that cite them, these science maps are only rough proxies for the potential of a scholar, organization, or country, to enter a new academic field. Here we use a large dataset of scholarly publications disambiguated at the individual level to create a map of science-or research space-where links connect pairs of fields based on the probability that an individual has published in both of them. We find that the research space is a significantly more accurate predictor of the fields that individuals and organizations will enter in the future than citation based science maps. At the country level, however, the research space and citations based science maps are equally accurate. These findings show that data on career trajectories-the set of fields that individuals have previously published in-provide more accurate predictors of future research output for more focalized units-such as individuals or organizations-than citation based science maps. Over the past few years, some embedding methods have been proposed for feature extraction and dimensionality reduction in various machine learning and pattern classification tasks. Among the methods proposed are Neighborhood Preserving Embedding (NPE), Locality Preserving Projection (LPP) and Local Discriminant Embedding (LDE) which have been used in such applications as face recognition and image video retrieval. However, although the data in these applications are more naturally represented as higher-order tensors, the embedding methods can only work with vectorized data representations which may not capture well some useful information in the original data. Moreover, high-dimensional vectorized representations also suffer from the curse of dimensionality and the high computational demand. In this paper, we propose some novel tensor embedding methods which, unlike previous methods, take data directly in the form of tensors of arbitrary order as input. These methods allow the relationships between dimensions of a tensor representation to be efficiently characterized. Moreover, they also allow the intrinsic local geometric and topological properties of the manifold embedded in a tensor space to be naturally estimated. Furthermore, they do not suffer from the curse of dimensionality and the high computational demand. We demonstrate the effectiveness of the proposed tensor embedding methods on a face recognition application and compare them with some previous methods. Extensive experiments show that our methods are not only more effective but also more efficient. In this paper, we learn explicit representations for dynamic shape manifolds of moving humans for the task of action recognition. We exploit locality preserving projections (LPP) for dimensionality reduction, leading to a low-dimensional embedding of human movements. Given a sequence of moving silhouettes associated to an action video, by LPP, we project them into a low-dimensional space to characterize the spatiotemporal property of the action, as well as to preserve much of the geometric structure. To match the embedded action trajectories, the median Hausdorff distance or normalized spatiotemporal correlation is used for similarity measures. Action classification is then achieved in a nearest-neighbor framework. To evaluate the proposed method, extensive experiments have been carried out on a recent dataset including ten actions performed by nine different subjects. The experimental results show that the proposed method is able to not only recognize human actions effectively, but also considerably tolerate some challenging conditions, e.g., partial occlusion, low-quality videos, changes in viewpoints, scales, and clothes; within-class variations caused by different subjects with different physical build; styles of motion; etc Graph clustering is a fundamental problem in social network analysis, the goal of which is to group vertices of a graph into a series of densely knitted clusters with each cluster well separated from all the others. Classical graph clustering methods take advantage of the graph topology to model and quantify vertex proximity. With the proliferation of rich graph contents, such as user profiles in social networks, and gene annotations in protein interaction networks, it is essential to consider both the structure and content information of graphs for high-quality graph clustering. In this paper, we propose a graph embedding approach to clustering content-enriched graphs. The key idea is to embed each vertex of a graph into a continuous vector space where the localized structural and attributive information of vertices can be encoded in a unified, latent representation. Specifically, we quantify vertex-wise attribute proximity into edge weights, and employ truncated, attribute-aware random walks to learn the latent representations for vertices. We evaluate our attribute-aware graph embedding method in real-world attributed graphs, and the results demonstrate its effectiveness in comparison with state-of-the-art algorithms. Since the invention of word2vec, the skip-gram model has significantly advanced the research of network embedding, such as the recent emergence of the DeepWalk, LINE, PTE, and node2vec approaches. In this work, we show that all of the aforementioned models with negative sampling can be unified into the matrix factorization framework with closed forms. Our analysis and proofs reveal that: (1) DeepWalk empirically produces a low-rank transformation of a network's normalized Laplacian matrix; (2) LINE, in theory, is a special case of DeepWalk when the size of vertices' context is set to one; (3) As an extension of LINE, PTE can be viewed as the joint factorization of multiple networks» Laplacians; (4) node2vec is factorizing a matrix related to the stationary distribution and transition probability tensor of a 2nd-order random walk. We further provide the theoretical connections between skip-gram based network embedding algorithms and the theory of graph Laplacian. Finally, we present the NetMF method as well as its approximation algorithm for computing network embedding. Our method offers significant improvements over DeepWalk and LINE for conventional network mining tasks. This work lays the theoretical foundation for skip-gram based network embedding methods, leading to a better understanding of latent network representation learning.