It has recently been observed that the permanent of a nonnegative square matrix, i.e., of a square matrix containing only nonnegative real entries, can very well be approximated by solving a certain Bethe free energy function minimization problem with the help of the sum-product algorithm. We call the resulting approximation of the permanent the Bethe permanent. In this paper, we give reasons why this approach to approximating the permanent works well. Namely, we show that the Bethe free energy function is convex and that the sum-product algorithm finds its minimum efficiently. We then discuss the fact that the permanent is lower bounded by the Bethe permanent, and we comment on potential upper bounds on the permanent based on the Bethe permanent. We also present a combinatorial characterization of the Bethe permanent in terms of permanents of so-called lifted versions of the matrix under consideration. Moreover, we comment on possibilities to modify the Bethe permanent so that it approximates the permanent even better, and we conclude the paper with some observations and conjectures about permanent-based pseudocodewords and permanent-based kernels.
The present paper has some similarities with recent papers by Barvinok on counting zero one matrices with prescribed row and column sums @cite_49 and by Barvinok and Samorodnitsky on computing the partition function for perfect matchings in hypergraphs @cite_6 . However, these papers pursue what would be called a mean-field theory approach in the physics literature @cite_62 . An exception to the previous statement is Section 3.2 in @cite_49 , which contains Bethe-approximation-type computations. (See the references in that section for further papers that investigate similar approaches.)
@cite_62 @cite_6 @cite_49
2139974605 2150635973
Abstract Documents in computer-readable form can be used to provide information about other documents, i.e. those they cite. To do this efficiently requires procedures for computer recognition of citing statements. This is not easy, especially for multi-sentence citing statements. Computer recognition procedures have been developed which are accurate to the following extent: 73 of the words in statements selected by computer procedures as being citing statements are words which are correctly attributable to the corresponding documents. The retrieval effectiveness of computer-recognized citing statements was tested in the following way. First, for eight retrieval requests in inorganiic chemistry, average recall by search of Chemical Abstracts Service indexing and Chemical Abstracts abstract text words was found to be 50 . Words from citing statements referring to the papers to be retrieved were then added to the index terms and abstract words as additional access points, and searching was repeated. Average recall increased to 70 . Only words from citing statements published within a year of the cited papers were used. The retrieval effect of citing statement words alone (published within a year) without index or abstract terms was the following: average recall was 40 . When just the words of the titles of the cited papers were added to those citing statement words, average recall increased to 50 . A new form of document coupling called co-citation is defined as the frequency with which two documents are cited together. The co-citation frequency of two scientific papers can be determined by comparing lists of citing documents in the Science Citation Index and counting identical entries. Networks of co-cited papers can be generated for specific scientific specialties, and an example is drawn from the literature of particle physics. Co-citation patterns are found to differ significantly from bibliographic coupling patterns, but to agree generally with patterns of direct citation. Clusters of co-cited papers provide a new way to study the specialty structure of science. They may provide a new approach to indexing and to the creation of SDI profiles. A citing sentence is one that appears in a scientific article and cites previous work. Citing sentences have been studied and used in many applications. For example, they have been used in scientific paper summarization, automatic survey generation, paraphrase identification, and citation function classification. Citing sentences that cite multiple papers are common in scientific writing. This observation should be taken into consideration when using citing sentences in applications. For instance, when a citing sentence is used in a summary of a scientific paper, only the fragments of the sentence that are relevant to the summarized paper should be included in the summary. In this paper, we present and compare three different approaches for identifying the fragments of a citing sentence that are related to a given target reference. Our methods are: word classification, sequence labeling, and segment classification. Our experiments show that segment classification achieves the best results. In recent years scholars have built maps of science by connecting the academic fields that cite each other, are cited together, or that cite a similar literature. But since scholars cannot always publish in the fields they cite, or that cite them, these science maps are only rough proxies for the potential of a scholar, organization, or country, to enter a new academic field. Here we use a large dataset of scholarly publications disambiguated at the individual level to create a map of science-or research space-where links connect pairs of fields based on the probability that an individual has published in both of them. We find that the research space is a significantly more accurate predictor of the fields that individuals and organizations will enter in the future than citation based science maps. At the country level, however, the research space and citations based science maps are equally accurate. These findings show that data on career trajectories-the set of fields that individuals have previously published in-provide more accurate predictors of future research output for more focalized units-such as individuals or organizations-than citation based science maps. The old Asian legend about the blind men and the elephant comes to mind when looking at how different authors of scientific papers describe a piece of related prior work. It turns out that different citations to the same paper often focus on different aspects of that paper and that neither provides a full description of its full set of contributions. In this article, we will describe our investigation of this phenomenon. We studied citation summaries in the context of research papers in the biomedical domain. A citation summary is the set of citing sentences for a given article and can be used as a surrogate for the actual article in a variety of scenarios. It contains information that was deemed by peers to be important. Our study shows that citation summaries overlap to some extent with the abstracts of the papers and that they also differ from them in that they focus on different aspects of these papers than do the abstracts. In addition to this, co-cited articles (which are pairs of articles cited by another article) tend to be similar. We show results based on a lexical similarity metric called cohesion to justify our claims. © 2008 Wiley Periodicals, Inc. This work is a follow-up to our previous work "A numerical approach related to defect-type theories for some weakly random problems in homogenization" (preprint available on this archive). It extends and complements, both theoretically and experimentally, the results presented there. Under consideration is the homogenization of a model of a weakly random heterogeneous material. The material consists of a reference periodic material randomly perturbed by another periodic material, so that its homogenized behavior is close to that of the reference material. We consider laws for the random perturbations more general than in our previous work cited above. We prove the validity of an asymptotic expansion in a certain class of settings. We also extend the formal approach introduced in our former work. Our perturbative approach shares common features with a defect-type theory of solid state physics. The computational efficiency of the approach is demonstrated. We consider the set Σ(R,C) of all m×n matrices having 0–1 entries and prescribed row sums R=(r1,…,rm) and column sums C=(c1,…,cn). We prove an asymptotic estimate for the cardinality |Σ(R,C)| via the solution to a convex optimization problem. We show that if Σ(R,C) is sufficiently large, then a random matrix D∈Σ(R,C) sampled from the uniform probability measure in Σ(R,C) with high probability is close to a particular matrix Z=Z(R,C) that maximizes the sum of entropies of entries among all matrices with row sums R, column sums C and entries between 0 and 1. Similar results are obtained for 0–1 matrices with prescribed row and column sums and assigned zeros in some positions. Historically, papers have been physically bound to the journal in which they were published; but in the digital age papers are available individually, no longer tied to their respective journals. Hence, papers now can be read and cited based on their own merits, independently of the journal's physical availability, reputation, or impact factor (IF). We compare the strength of the relationship between journals' IFs and the actual citations received by their respective papers from 1902 to 2009. Throughout most of the 20th century, papers' citation rates were increasingly linked to their respective journals' IFs. However, since 1990, the advent of the digital age, the relation between IFs and paper citations has been weakening. This began first in physics, a field that was quick to make the transition into the electronic domain. Furthermore, since 1990 the overall proportion of highly cited papers coming from highly cited journals has been decreasing and, of these highly cited papers, the proportion not coming from highly cited journals has been increasing. Should this pattern continue, it might bring an end to the use of the IF as a way to evaluate the quality of journals, papers, and researchers. © 2012 Wiley Periodicals, Inc. Citation relationship between scientific publications has been successfully used for scholarly bibliometrics, information retrieval and data mining tasks, and citation-based recommendation algorithms are well documented. While previous studies investigated citation relations from various viewpoints, most of them share the same assumption that, if paper1 cites paper2 (or author1 cites author2), they are connected, regardless of citation importance, sentiment, reason, topic, or motivation. However, this assumption is oversimplified. In this study, we employ an innovative "context-rich heterogeneous network" approach, which paves a new way for citation recommendation task. In the network, we characterize 1) the importance of citation relationships between citing and cited papers, and 2) the topical citation motivation. Unlike earlier studies, the citation information, in this paper, is characterized by citation textual contexts extracted from the full-text citing paper. We also propose algorithm to cope with the situation when large portion of full-text missing information exists in the bibliographic repository. Evaluation results show that, context-rich heterogeneous network can significantly enhance the citation recommendation performance. Scholars are increasingly citing electronic “web references” which are not preserved in libraries or full text archives. WebCite is a new standard for citing web references. To “webcite” a document involves archiving the cited Web page through www.webcitation.org and citing the WebCite permalink instead of (or in addition to) the unstable live Web page. This journal has amended its “instructions for authors” accordingly, asking authors to archive cited Web pages before submitting a manuscript. Almost 200 other journals are already using the system. We discuss the rationale for WebCite, its technology, and how scholars, editors, and publishers can benefit from the service. Citing scholars initiate an archiving process of all cited Web references, ideally before they submit a manuscript. Authors of online documents and websites which are expected to be cited by others can ensure that their work is permanently available by creating an archived copy using WebCite and providing the citation information including the WebCite link on their Web document(s). Editors should ask their authors to cache all cited Web addresses (Uniform Resource Locators, or URLs) “prospectively” before submitting their manuscripts to their journal. Editors and publishers should also instruct their copyeditors to cache cited Web material if the author has not done so already. Finally, WebCite can process publisher submitted “citing articles” (submitted for example as eXtensible Markup Language [XML] documents) to automatically archive all cited Web pages shortly before or on publication. Finally, WebCite can act as a focussed crawler, caching retrospectively references of already published articles. Copyright issues are addressed by honouring respective Internet standards (robot exclusion files, no-cache and no-archive tags). Long-term preservation is ensured by agreements with libraries and digital preservation organizations. The resulting WebCite Index may also have applications for research assessment exercises, being able to measure the impact of Web services and published Web documents through access and Web citation metrics. @PARASPLIT [J Med Internet Res 2005;7(5):e60] Purpose – The purpose of this paper is to suggest an alternative to the widely used Times Cited criterion for analysing citation networks. The approach involves taking account of the natures of the papers that cite a given paper, so as to differentiate between papers that attract the same number of citations.Design methodology approach – ArticleRank is an algorithm that has been derived from Google's PageRank algorithm to measure the influence of journal articles. ArticleRank is applied to two datasets – a citation network based on an early paper on webometrics, and a self‐citation network based on the 19 most cited papers in the Journal of Documentation – using citation data taken from the Web of Knowledge database.Findings – ArticleRank values provide a different ranking of a set of papers from that provided by the corresponding Times Cited values, and overcomes the inability of the latter to differentiate between papers with the same numbers of citations. The difference in rankings between Times Cited ... In a document network such as a citation network of scientific documents, web-logs, etc., the content produced by authors exhibits their interest in certain topics. In addition some authors influence other authors' interests. In this work, we propose to model the influence of cited authors along with the interests of citing authors. Moreover, we hypothesize that apart from the citations present in documents, the context surrounding the citation mention provides extra topical information about the cited authors. However, associating terms in the context to the cited authors remains an open problem. We propose novel document generation schemes that incorporate the context while simultaneously modeling the interests of citing authors and influence of the cited authors. Our experiments show significant improvements over baseline models for various evaluation criteria such as link prediction between document and cited author, and quantitatively explaining unseen text. This article challenges recent research (Evans, 2008) reporting that the concentration of cited scientific literature increases with the online availability of articles and journals. Using Thomson Reuters' Web of Science, the present article analyses changes in the concentration of citations received (2- and 5-year citation windows) by papers published between 1900 and 2005. Three measures of concentration are used: the percentage of papers that received at least one citation (cited papers); the percentage of papers needed to account for 20 , 50 , and 80 of the citations; and the Herfindahl-Hirschman index (HHI). These measures are used for four broad disciplines: natural sciences and engineering, medical fields, social sciences, and the humanities. All these measures converge and show that, contrary to what was reported by Evans, the dispersion of citations is actually increasing. © 2009 Wiley Periodicals, Inc. The popular h-index used to measure scientific output can be described in terms of a pool of evaluated objects (the papers), a quality function on the evaluated objects (the number of citations received by each paper) and a sentencing line crossing the origin, whose intersection with the graph of the quality function yields the index value (in the h-index this is a line with slope 1). Based on this abstraction, we present a new index, the c-index, in which the evaluated objects are the citations received by an author, a group of authors, a journal, etc., the quality function of a citation is the collaboration distance between the authors of the cited and the citing papers, and the sentencing line can take slopes between 0 and ∞. As a result, the new index counts only those citations which are significant enough, where significance is proportional to collaboration distance. Several advantages of the new c-index with respect to previous proposals are discussed. Mapping of science and technology can be done at different levels of aggregation, using a variety of methods. In this paper, we propose a method in which title words are used as indicators for the content of a research topic, and cited references are used as the context in which words get their meaning. Research topics are represented by sets of papers that are similar in terms of these word-reference combinations. In this way we use words without neglecting differences and changes in their meanings. The method has several advantages, such as high coverage of publications. As an illustration we apply the method to produce knowledge maps of information science. Preface 1. Introduction 2. Some context for Context Analysis: a view of the origins of structural studies of face-to-face interaction 3. Some functions of gaze direction in two-person conversation 4. Movement co-ordination in social interaction 5. Some functions of the face in a kissing round 6. A description of some human greetings 7. Spatial organisation in social encounters: the F-formation system 8. Behavioural foundations for the process of frame-attunement in face-to-face interaction List of films cited References Index. Reading academic paper is a daily task for researchers and graduate students. However, reading effectively can be challenging, particularly for novices in scientific research. For example, when readers are reading the related work section that cites a fair number of references in limited page space, they often need to flip back and forth between the text and the references and may also frequently search elsewhere for more information about the references. This increases the difficulty of understanding a paper. In this paper, we propose a narrative visualization system that helps the reading of academic papers. As a first step, we adopt narrative visualization to present literature review as interactive slides. Specifically, we propose a narrative structure with three levels of granularities that the reader can drill down or roll up freely. The logic flow of a slideshow can be organized based on the paper's presentation or citations. We demonstrate the effectiveness of our system through several case studies and user studies. The results show that the system allows users to quickly track and glance related work, making paper reading more effective and enjoyable. In this paper we study the distribution of eigenvalues for two sets of random Hermitian matrices and one set of random unitary matrices. The statement of the problem as well as its method of investigation go back originally to the work of Dyson [i] and I. M. Lifsic [2], [3] on the energy spectra of disordered systems, although in their probability character our sets are more similar to sets studied by Wigner [4]. Since the approaches to the sets we consider are the same, we present in detail only the most typical case. The corresponding results for the other two cases are presented without proof in the last section of the paper. §1. Statement of the problem and survey of results We shall consider as acting in iV-dimensiona l unitary space v, a selfadjoint operator BN (re) of the form Given an n × m nonnegative matrix A = (a ij ) and positive integral vectors r e ℜ n and c e Âm having a common one-norm h, the (r,c)-scaling problem is to obtain positive diagonal matrices X and Y, if they exist, such that XAY has row and column sums equal to r and c, respectively. The entropy minimization problem corresponding to A is to find an n × m matrix z = (z ij ) having the same zero pattern as A, the sum of whose entries is a given number h, its row and column sums are within given integral vectors of lower and upper bounds, and such that the entropy function consisting of the sum of the terms z ij ln (z ij a ij ) is minimized. When the lower and upper bounds coincide, matrix scaling and entropy minimization are closely related. In this paper we present several complexity bounds for the e-approximate (r,c)-scaling problem, polynomial in n,m,h, 1 e, and ln V v, where V and v are the largest and the smallest positive entries of A, respectively. These bounds, although not polynomial in ln(1 1 e), not only provide alternative complexities for the polynomial time algorithms, but could result in better overall complexities. In particular, our theoretical analysis supports the practicality of the well-known RAS algorithm. In our analysis we obtain bounds on the norm of scaling vectors which will be used in deriving not only some of the above complexities, but also a complexity for square nonnegative matrices having positive permanent. In particular, our results extend, nontrivially, many bounds for the doubly stochastic scaling of square nonnegative matrices previously given by Kalantari and Khachiyan to the case of general (r,c)-scaling. Finally, we study a more general entropy minimization problem where row and column sums are constrained to lie in prescribed intervals, and the sum of all entries is also prescribed. Balinski and Demange described an RAS type algorithm for its continuous version, but did not analyze its complexity. We show that this algorithm produces an 1 e-approximate solution within complexity polynomial in n, m, h, V v and 1 1 e. We consider the problem of computing the permanent of a 0,1n by n matrix. For a class of matrices corresponding to constant degree expanders we construct a deterministic polynomial time approximation algorithm to within a multiplicative factor ([email protected])^n, for arbitrary @e>0. This is an improvement over the best known approximation factor e^n obtained in Linial, Samorodnitsky and Wigderson (2000) [9], though the latter result was established for arbitrary non-negative matrices. Our results use a recently developed deterministic approximation algorithm for counting partial matchings of a graph (Bayati, Gamarnik, Katz, Nair and Tet ali (2007) [2]) and Jerrum-Vazirani method (Jerrum and Vazirani (1996) [8]) of approximating permanent by near perfect matchings.