This paper is concerned with practical implementations of approximate string dictionaries that allow edit errors. In this problem, we have as input a dictionary @math of @math strings of total length @math over an alphabet of size @math . Given a bound @math and a pattern @math of length @math , a query has to return all the strings of the dictionary which are at edit distance at most @math from @math , where the edit distance between two strings @math and @math is defined as the minimum-cost sequence of edit operations that transform @math into @math . The cost of a sequence of operations is defined as the sum of the costs of the operations involved in the sequence. In this paper, we assume that each of these operations has unit cost and consider only three operations: deletion of one character, insertion of one character and substitution of a character by another. We present a practical implementation of the data structure we recently proposed and which works only for one error. We extend the scheme to @math . Our implementation has many desirable properties: it has a very fast and space-efficient building algorithm. The dictionary data structure is compact and has fast and robust query time. Finally our data structure is simple to implement as it only uses basic techniques from the literature, mainly hashing (linear probing and hash signatures) and succinct data structures (bitvectors supporting rank queries).
For more than one error, the work of @cite_1 , was the first to present good worst-case performance for any @math . However the bounds are not competitive with the recent works both in terms of space and time for the case of @math . Also the data structure presented there seems rather complicated and incurs a polylogarithmic additive term in the query time which could in practice dominate the total query time. We are not aware of any implementation of that data structure.
@cite_1
2085218027
In this paper, we study the communication complexity for the problem of computing a conjunctive query on a large database in a parallel setting with @math servers. In contrast to previous work, where upper and lower bounds on the communication were specified for particular structures of data (either data without skew, or data with specific types of skew), in this work we focus on worst-case analysis of the communication cost. The goal is to find worst-case optimal parallel algorithms, similar to the work of [18] for sequential algorithms. We first show that for a single round we can obtain an optimal worst-case algorithm. The optimal load for a conjunctive query @math when all relations have size equal to @math is @math , where @math is a new query-related quantity called the edge quasi-packing number, which is different from both the edge packing number and edge cover number of the query hypergraph. For multiple rounds, we present algorithms that are optimal for several classes of queries. Finally, we show a surprising connection to the external memory model, which allows us to translate parallel algorithms to external memory algorithms. This technique allows us to recover (within a polylogarithmic factor) several recent results on the I O complexity for computing join queries, and also obtain optimal algorithms for other classes of queries.