At the light of regularized dynamic time warping kernels, this paper reconsider the concept of time elastic centroid (TEC) for a set of time series. From this perspective, we show first how TEC can easily be addressed as a preimage problem. Unfortunately this preimage problem is ill-posed, may suffer from over-fitting especially for long time series and getting a sub-optimal solution involves heavy computational costs. We then derive two new algorithms based on a probabilistic interpretation of kernel alignment matrices that expresses in terms of probabilistic distributions over sets of alignment paths. The first algorithm is an iterative agglomerative heuristics inspired from the state of the art DTW barycenter averaging (DBA) algorithm proposed specifically for the Dynamic Time Warping measure. The second proposed algorithm achieves a classical averaging of the aligned samples but also implements an averaging of the time of occurrences of the aligned samples. It exploits a straightforward progressive agglomerative heuristics. An experimentation that compares for 45 time series datasets classification error rates obtained by first near neighbors classifiers exploiting a single medoid or centroid estimate to represent each categories show that: i) centroids based approaches significantly outperform medoids based approaches, ii) on the considered experience, the two proposed algorithms outperform the state of the art DBA algorithm, and iii) the second proposed algorithm that implements an averaging jointly in the sample space and along the time axes emerges as the most significantly robust time elastic averaging heuristic with an interesting noise reduction capability. Index Terms—Time series averaging Time elastic kernel Dynamic Time Warping Time series clustering and classification.
Time series averaging in the context of (multiple) time elastic distance alignments has been mainly addressed in the scope of the Dynamic Time Warping (DTW) measure @cite_26 , @cite_21 . Although other time elastic distance measures such as the Edit Distance With Real Penalty (ERP) @cite_12 or the Time Warp Edit Distance (TWED) @cite_28 could be considered instead, without loss of generality, we remain focused throughout this paper on DTW and its kernelization.
@cite_28 @cite_26 @cite_21 @cite_12
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In a way similar to the string-to-string correction problem, we address discrete time series similarity in light of a time-series-to-time-series-correction problem for which the similarity between two time series is measured as the minimum cost sequence of edit operations needed to transform one time series into another. To define the edit operations, we use the paradigm of a graphical editing process and end up with a dynamic programming algorithm that we call time warp edit distance (TWED). TWED is slightly different in form from dynamic time warping (DTW), longest common subsequence (LCSS), or edit distance with real penalty (ERP) algorithms. In particular, it highlights a parameter that controls a kind of stiffness of the elastic measure along the time axis. We show that the similarity provided by TWED is a potentially useful metric in time series retrieval applications since it could benefit from the triangular inequality property to speed up the retrieval process while tuning the parameters of the elastic measure. In that context, a lower bound is derived to link the matching of time series into down sampled representation spaces to the matching into the original space. The empiric quality of the TWED distance is evaluated on a simple classification task. Compared to edit distance, DTW, LCSS, and ERP, TWED has proved to be quite effective on the considered experimental task. Experiments on the automatic recognition of 203 Russian words are described. The experimental vocabulary includes terms of the language, ALGOL -60 together with others. The logarithmic characteristics of acoustic signal in five bands are extracted as features. The measure of similarity between the words of standard and control sequences is calculated by the words maximizing a definite functional using dynamic programming. The average reliability of recognition for one speaker obtained for experiments using 5000 words is 0·95. The computational time for recognition is 2-4 sec. Existing studies on time series are based on two categories of distance functions. The first category consists of the Lp-norms. They are metric distance functions but cannot support local time shifting. The second category consists of distance functions which are capable of handling local time shifting but are nonmetric. The first contribution of this paper is the proposal of a new distance function, which we call ERP ("Edit distance with Real Penalty"). Representing a marriage of L1- norm and the edit distance, ERP can support local time shifting, and is a metric. The second contribution of the paper is the development of pruning strategies for large time series databases. Given that ERP is a metric, one way to prune is to apply the triangle inequality. Another way to prune is to develop a lower bound on the ERP distance. We propose such a lower bound, which has the nice computational property that it can be efficiently indexed with a standard B+- tree. Moreover, we show that these two ways of pruning can be used simultaneously for ERP distances. Specifically, the false positives obtained from the B+-tree can be further minimized by applying the triangle inequality. Based on extensive experimentation with existing benchmarks and techniques, we show that this combination delivers superb pruning power and search time performance, and dominates all existing strategies.