Occurrence of Salmonella genomic island 1 (SGI1) in two African Proteus mirabilis strains isolated from diseased chicken flocks.
Two P. mirabilis strains, PmSHR21 and PmSHR38, were collected from chicken flocks in Sharkia Governorate, Egypt in 2016. The two strains showed multidrug-resistance (MDR) phenotypes and were detected to harbour I) floR and sul1 genes conferring resistance to florfenicol and chloramphenicol, and sulfonamides, respectively, II) a ~1.9 kbp class 1 integron containing aadA2-lnuF genes conferring resistance to spectinomycin and streptomycin, and lincosamides, respectively. Interestingly, the two strains were detected to contain SGI1 variant, SGI1-W and inserted between the 3' end of the chromosomal trmE gene and the hipB/hipA toxin/antitoxin homologue. Fingerprinting by ERIC-PCR of the two poultry strains identified in this study and the two human SGI1-carrying P. mirabilis strains described recently in our study showed identical ERIC-pattern between SGI1-W-carrying poultry and human strains, suggesting that they might be clonally related. The detection of SGI1 and its variants in P. mirabilis isolated from humans and chicken flocks in Egypt clarify the geographical and biological spreading through an inter-transmission pathway. To the best of our knowledge, this is the first study detecting SGI1-positive P. mirabilis isolated from chicken flocks in Africa.
Genomic and functional characterization of fecal sample strains of Proteus cibarius carrying two floR antibiotic resistance genes and a multiresistance plasmid-encoded cfr gene.
The objective of this study was to investigate the molecular characteristics and horizontal transfer of florfenicol resistance gene-related sequences in Proteus strains isolated from animals. A total of six Proteus strains isolated from three farms between 2015 and 2016 were screened by polymerase chain reaction (PCR) for known florfenicol resistance genes. Proteus cibarius G11, isolated from the fecal material of a goose, was found to harbor both cfr and floR genes. Whole genome sequencing revealed that the strain harbored two copies of the floR gene: one was located on the chromosome and the other was located on a plasmid named pG11-152. Two floR-containing fragments 4028 bp in length were identical and showed transposon-like structures. The cfr gene was found on a plasmid named pG11-51 and flanked by a pair of IS26s. Thus, mobile genetic elements played an important role in floR replication and horizontal resistance gene transfer. Therefore, increasing attention should be paid to monitoring the spread of resistance genes and resistance in real time.
The Tsetse Problem on the Eastern Cattle Route in the Gold Coast
1. Primary fly-belts round Makongo consisted of three different vegetational communities: a Cynometra-Vitex association along the main length of the Makongo river, on a clay soil; a Ficus congensis association along the river close to the town, on a sandy soil; and Isoberlinia doka woodland on moist sandy soil north-west and south of Makongo. 2. Secondary fly-belts of less dense vegetation occur in the orchard bush savannah round Makongo, and these are not colonised until the commencement of the rainy season. 3. Glossina tachinoides and G. palpalis both occurred in the riverside communities, and G. palpalis alone in the Isoberlinia woodland. 4. Along the river G. palpalis outnumbered G. tachinoides by 3:1 in the dry season. At the commencement of the rains G. tachinoides increased more quickly than G. palpalis , bringing their numbers very nearly equal, but at the end of the rains there was a decrease in G. tachinoides which restored the original proportion. 5. G. morsitans had been found at Makongo formerly but was not met with at the time of this investigation, its absence being due to the disappearance of the larger antelope from the neighbourhood. 6. Smaller game animals, small mammals and reptiles afforded an adequate food supply for tsetse in the fly-belts, and also passing herds of cattle, as well as natives from the village and travellers. 7. The distribution of G. palpalis within the fly-belts was markedly influenced by the proximity of a cattle road along which herds of cattle passed almost daily, and by village water-holes. 8. During the dry season the primary foci were always found to be the places of greatest relative humidity, and the fly does not tend to move out of these until the general atmospheric humidity has reached a certain fairly high degree. 9. In clearing the fly-belts the removal of all primary foci within a quarter of a mile of the town and of thick bush within 100 yards of water-holes was undertaken. The work lasted from the beginning of February to the end of March 1931. 10. The effect of clearing the Isoberlinia doka woodland was to banish G. palpalis completely, and it never returned to these clearings. 11. On clearing the riverside Ficus congensis fly-belt, G. tachinoides was practically eliminated for the first three months, but reappeared in the clearings in June when there was a general increase and up-stream migration of this fly. G. palpalis remained in this clearing in fluctuating numbers up to June, when observations were suspended. 12. 565 marked tsetse were liberated in the fly-belts immediately previous to clearing. Of G. palpalis 12·7% were recaptured in the clearings and 11% outside the clearings. Of G. tachinoides 5·5% were recaptured in the clearings and 6·8% outside.