Scale space approximated convolutional neural networks for retinal vessel segmentation
BACKGROUND AND OBJECTIVE Retinal fundus images are widely used to diagnose retinal diseases and can potentially be used for early diagnosis and prevention of chronic vascular diseases and diabetes. While various automatic retinal vessel segmentation methods using deep learning have been proposed, they are mostly based on common CNN structures developed for other tasks such as classification. METHODS We present a novel and simple multi scale convolutional neural network (CNN) structure for retinal vessel segmentation. We first provide a theoretical analysis of existing multi scale structures based on signal processing. In previous structures, multi scale representations are achieved through downsampling by subsampling and decimation. By incorporating scale space theory, we propose a simple yet effective multi scale structure for CNNs using upsampling, which we term scale space approximated CNN (SSANet) Based on further analysis of the effects of the SSA structure within a CNN, we also incorporate residual blocks, resulting in a multi scale CNN that outperforms current state of the art methods. RESULTS Quantitative evaluations are presented as the area under curve (AUC) of the receiver operating characteristic (ROC) curve and the precision recall curve, as well as accuracy, for four publicly available datasets, namely DRIVE, STARE, CHASE_DB1, and HRF. For the CHASE_DB1 set, the SSANet achieves state of the art AUC value of 0.9916 for the ROC curve. An ablative analysis is presented to analyze the contribution of different components of the SSANet to the performance improvement. CONCLUSIONS The proposed retinal SSANet achieves state of the art or comparable accuracy across publicly available datasets, especially improving segmentation for thin vessels, vessel junctions, and central vessel reflexes.
Comput. Methods Programs Biomed.