195613227
Mining High-Dimensional Data
With the rapid growth of computational biology and e-commerce applications, high-dimensional data becomes very common. Thus, mining high-dimensional data is an urgent problem of great practical importance. However, there are some unique challenges for mining data of high dimensions, including (1) the curse of dimensionality and more crucial (2) the meaningfulness of the similarity measure in the high dimension space. In this chapter, we present several state-of-art techniques for analyzing high-dimensional data, e.g., frequent pattern mining, clustering, and classification. We will discuss how these methods deal with the challenges of high dimensionality.
14969897
Dynamic adaptive file management in a local area network
In light of advances in processor and networking technology, especially the emergence of network attached disks, the traditional client-server architecture of file systems has become suboptimal for many computation/data intensive applications. We introduce a revised architecture for file management employing network attached storage: the dynamic file server environment (Dynamo). Dynamo introduces two main architectural innovations: to provide high scalability, the file management functions are mainly performed cooperatively by the clients in the system. Furthermore, data is transferred directly to the client's cache from network-attached disks, thus avoiding copies from a disk to the server buffer and then over the network to the client. Secondly, Dynamo uses a cooperative cache management which employs a decentralized lottery-based page replacement strategy. We show via performance benchmarks run on the Dynamo system and simulation results how this architecture increases the system's adaptability, scalability and cost performance.
2548187
Mining asynchronous periodic patterns in time series data
Periodicy detection in time series data is a challenging problem of great importance in many applications. Most previous work focused on mining synchronous periodic patterns and did not recognize the misaligned presence of a pattern due to the intervention of random noise. In this paper, we propose a more flexible model of asynchronous periodic pattern that may be present only within a subsequence and whose occurrences may be shifted due to disturbance. Two parameters min rep and max dis are employed to specify the minimum number of repetitions that is required within each segment of nondisrupted pattern occurrences and the maximum allowed disturbance between any two successive valid segments. Upon satisfying these two requirements, the longest valid subsequence of a pattern is returned. A two-phase algorithm is devised to first generate potential periods by distance-based pruning followed by an iterative procedure to derive and validate candidate patterns and locate the longest valid subsequence. We also show that this algorithm cannot only provide linear time complexity with respect to the length of the sequence but also achieve space
7408751
Quantitative Association Analysis Using Tree Hierarchies
Association analysis arises in many important applications such as bioinformatics and business intelligence. Given a large collection of measurements over a set of samples, association analysis aims to find dependencies of target variables to subsets of measurements. Most previous algorithms adopt a two-stage approach; they first group samples based on the similarity in the subset of measurements, and then they examine the association between these groups and the specified target variables without considering the inter-group similarities or alternative groupings. This can lead to cases where the strength of association depends significantly on arbitrary clustering choices. In this paper, we propose a tree-based method for quantitative association analysis. Tree hierarchies derived from sample similarities represent many possible sample groupings. They also provide a natural way to incorporate domain knowledge such as ontologies and to identify and remove outliers. Given a tree hierarchy, our association analysis evaluates all possible groupings and selects the one with strongest association to the target variable. We introduce an efficient algorithm, TreeQA, to systematically explore the search-space of all possible groupings in a set of input trees, with integrated permutation tests. Experimental results show that TreeQA is able to handlelarge-scale association analysis very efficiently and is more effective and robust in association analysis than previous methods.
5788516
Efficient genome ancestry inference in complex pedigrees with inbreeding
Motivation: High-density SNP data of model animal resources provides opportunities for fine-resolution genetic variation studies. These genetic resources are generated through a variety of breeding schemes that involve multiple generations of matings derived from a set of founder animals. In this article, we investigate the problem of inferring the most probable ancestry of resulting genotypes, given a set of founder genotypes. Due to computational difficulty, existing methods either handle only small pedigree data or disregard the pedigree structure. However, large pedigrees of model animal resources often contain repetitive substructures that can be utilized in accelerating computation. Results: We present an accurate and efficient method that can accept complex pedigrees with inbreeding in inferring genome ancestry. Inbreeding is a commonly used process in generating genetically diverse and reproducible animals. It is often carried out for many generations and can account for most of the computational complexity in real-world model animal pedigrees. Our method builds a hidden Markov model that derives the ancestry probabilities through inbreeding process without explicit modeling in every generation. The ancestry inference is accurate and fast, independent of the number of generations, for model animal resources such as the Collaborative Cross (CC). Experiments on both simulated and real CC data demonstrate that our method offers comparable accuracy to those methods that build an explicit model of the entire pedigree, but much better scalability with respect to the pedigree size. Contact: weiwang@cs.unc.edu
62615149
Mining Asynchronous Periodic Patterns in Time Series Data
Periodicy detection in time series data is a challenging problem of great importance in many applications. Most previous work focused on mining synchronous periodic patterns and did not recognize the misaligned presence of a pattern due to the intervention of random noise. In this paper, we propose a more flexible model of asynchronous periodic pattern that may be present only within a subsequence and whose occurrences may be shifted due to disturbance. Two parameters min/spl I.bar/rep and max/spl I.bar/dis are employed to specify the minimum number of repetitions that is required within each segment of nondisrupted pattern occurrences and the maximum allowed disturbance between any two successive valid segments. Upon satisfying these two requirements, the longest valid subsequence of a pattern is returned. A two-phase algorithm is devised to first generate potential periods by distance-based pruning followed by an iterative procedure to derive and validate candidate patterns and locate the longest valid subsequence. We also show that this algorithm cannot only provide linear time complexity with respect to the length of the sequence but also achieve space efficiency.
14792668
Personalization as a service: the architecture and a case study
Cloud computing has become a hot topic in the IT industry. Great efforts have been made to establish cloud computing platforms for enterprise users, mostly small businesses. However, there are few researches about the impact of cloud computing over individual users. In this paper we focus on how to provide personalized services for individual users in the cloud environment. We argue that a personalized cloud service shall compose of two parts. The client side program records user activities on personal de-vices such as PC. Besides that, the user model is also computed on the client side to avoid server overhead. The cloud side program fetches the user model periodically and adjusts its results accordingly. We build a personalized cloud data search engine prototype to prove our idea.
14980553
Attribute Normalization in Network Intrusion Detection
Anomaly intrusion detection is an important issue in computer network security. As a step of data preprocessing, attribute normalization is essential to detection performance. However, many anomaly detection methods do not normalize attributes before training and detection. Few methods consider to normalize the attributes but the question of which normalization method is more effective still remains. In this paper, we introduce four different schemes of attribute normalization to preprocess the data for anomaly intrusion detection. Three methods, k-NN, PCA as well as SVM, are then employed on the normalized data for comparison of the detection results. KDD Cup 1999 data are used to evaluate the normalization schemes and the detection methods. The systematical evaluation results show that the process of attribute normalization improves a lot the detection performance. The statistical normalization scheme is the best choice for detection if the data set is large.
258373
Preserving Private Knowledge in Frequent Pattern Mining
The knowledge discovered by data mining may contain sensitive information, which may cause potential threats towards privacy and security. In this paper, we address the problem of better preserving private knowledge by proposing an Item-based Pattern Sanitization to prevent the disclosure of private patterns. We also present two strategies to generate a safe and shareable pattern set for preserving private knowledge in frequent pattern mining
14325893
Maintaining K-Anonymity against Incremental Updates
K-anonymity is a simple yet practical mechanismto protect privacy against attacks of re-identifying individuals by joining multiple public data sources. All existing methods achieving k-anonymity assume implicitly that the data objects to be anonymized are given once and fixed. However, in many applications, the real world data sources are dynamic. In this paper, we investigate the problem of maintaining k-anonymity against incremental updates, and propose a simple yet effective solution. We analyze how inferences from multiple releases may temper the k-anonymity of data, and propose the monotonic incremental anonymization property. The general idea is to progressively and consistently reduce the generalization granularity as incremental updates arrive. Our new approach guarantees the k-anonymity on each release, and also on the inferred table using multiple releases. At the same time, our new approach utilizes the more and more accumulated data to reduce the information loss.
7316344
CLINCH: Clustering Incomplete High-Dimensional Data for Data Mining Application
Clustering is a common technique in data mining to discover hidden patterns from massive datasets. With the development of privacy-maintaining data mining application, clustering incomplete high-dimensional data has becoming more and more useful. Motivated by these limits, we develop a novel algorithm CLINCH, which could produce fine clusters on incomplete high-dimensional data space. To handle missing attributes, CLINCH employs a prediction method that can be more precise than traditional techniques. On the other hand, we also introduce an efficient way in which dimensions are processed one by one to attack the “curse of dimensionality”. Experiments show that our algorithm not only outperforms many existing high-dimensional clustering algorithms in scalability and efficiency, but also produces precise results.