16328925
An empirical evaluation of architectural alternatives for J2EE and Web services
Component-based technologies such as J2EE and .NET have been widely adopted to develop Web-based applications. With the emerging use of Web services and service-based architectures, such component technologies provide the necessary back-end components to execute application business logic, supporting a variety of architectural alternatives. The combination of component technologies with Web services further extends the set of architecture choices, with each providing different levels of performance. It is therefore important for an architect to understand these performance implications in the early stages of the architecture design. In this paper, we measure and analyze the performance of four alternative architectures using J2EE and Web services. The purpose is to investigate the effects on performance, identify both hardware and software bottlenecks, and analyze the architectural design trade-offs.
16602968
Performance prediction of J2EE applications using messaging protocols
Predicting the performance of component-based applications is difficult due to the complexity of the underlying component technology. This problem is exacerbated when a messaging protocol is introduced to create a loosely coupled software architecture. Messaging uses asynchronous communication, and must address quality of service issues such as message persistence and flow control. In this paper, we present an approach to predicting the performance of Java 2 Enterprise Edition (J2EE) applications using messaging services. The prediction is done during application design, without access to the application implementation. This is achieved by modeling the interactions among J2EE and messaging components using queuing network models, calibrating the performance model with architecture attributes associated with these components, and populating the model parameters using a lightweight, application-independent benchmark. Benchmarking avoids the need for prototype testing in order to obtain the value of model parameters, and thus reduces the performance prediction effort. A case study is carried out to predict the performance of a J2EE application with asynchronous communication. Analysis of the resulting predictions shows the error is within 15%.
18374506
Design-level performance prediction of component-based applications
Server-side component technologies such as Enterprise JavaBeans (EJBs), .NET, and CORBA are commonly used in enterprise applications that have requirements for high performance and scalability. When designing such applications, architects must select suitable component technology platform and application architecture to provide the required performance. This is challenging as no methods or tools exist to predict application performance without building a significant prototype version for subsequent benchmarking. In this paper, we present an approach to predict the performance of component-based server-side applications during the design phase of software development. The approach constructs a quantitative performance model for a proposed application. The model requires inputs from an application-independent performance profile of the underlying component technology platform, and a design description of the application. The results from the model allow the architect to make early decisions between alternative application architectures in terms of their performance and scalability. We demonstrate the method using an EJB application and validate predictions from the model by implementing two different application architectures and measuring their performance on two different implementations of the EJB platform.
11844078
Customized Benchmark Generation Using MDA
This paper describes an approach for generating customized benchmark applications from a software architecture description using a Model Driven Architecture (MDA) approach. The benchmark generation and performance data capture tool implementation is based on widely used open source MDA frameworks. The business logic of the benchmark application is modeled in UML and generated by taking advantage of the existing generation "cartridges" so that the current component technology can be exploited in the benchmark. This greatly reduces the effort and expertise needed for benchmarking with complex component technology. We have also extended the MDA framework to model and generate a load testing suite and automatic performance measurement infrastructure. The approach complements current model-based performance prediction and analysis methods by generating the benchmark application from the same application architecture that the performance models are derived from. This provides the potential for tightly integrating runtime performance measurement with model-based prediction either for model validation or improving model prediction accuracy. We illustrate the approach using a case study based on EJB component technology.
41398857
BIRD: Biomedical Information Integration and Discovery with Semantic Web Services
Biomedical research is now information intensive; the volume and diversity of new data sources challenges current database technologies. The development and tuning of database technologies for biology and medicine will maintain and accelerate the current pace for innovation and discovery. New promising application fields such as the Semantic Web and Semantic Web Services can leverage the potential of biomedical information integration and discovery, facing the problem of semantic heterogeneity of biomedical information sources in a variety of storage and data formats widely distributed both across the Internet and within individual organizations. In this paper, we present BIRD, a fully-fledged biomedical information integration solution that combines natural language analysis and semantically-empowered techniques to ascertain how the user needs can be best fit. Our approach is backed with a proof-of-concept implementation where the breakthrough and efficiency of integrating the biomedical publications database PubMed, the Database of Interacting Proteins (DIP) and the Munich Information Center for Protein Sequences (MIPS) has been tested.
1126987
Bayesian body localization using mixture of nonlinear shape models
We present a 2D model-based approach to localizing human body in images viewed from arbitrary and unknown angles. The central component is a statistical shape representation of the nonrigid and articulated body contours, where a nonlinear deformation is decomposed based on the concept of parts. Several image cues are combined to relate the body configuration to the observed image, with self occlusion explicitly treated. To accommodate large viewpoint changes, a mixture of view-dependent models is employed. Inference is done by direct sampling of the posterior mixture, using Sequential Monte Carlo (SMC) simulation enhanced with annealing and kernel move. The fitting method is independent of the number of mixture components, and does not require the preselection of a "correct" viewpoint. The models were trained on a large number of interactively labeled gait images. Preliminary tests demonstrated the feasibility of the proposed approach.
10483406
A maximum coherence model for dictionary-based cross-language information retrieval
One key to cross-language information retrieval is how to efficiently resolve the translation ambiguity of queries given their short length. This problem is even more challenging when only bilingual dictionaries are available, which is the focus of this paper. In the previous research of cross-language information retrieval using bilingual dictionaries, the word co-occurrence statistics is used to determine the most likely translations of queries. In this paper, we propose a novel statistical model, named ``maximum coherence model'', which estimates the translation probabilities of query words that are consistent with the word co-occurrence statistics. Unlike the previous work, where a binary decision is made for the selection of translations, the new model maintains the uncertainty in translating query words when their sense ambiguity is difficult to resolve. Furthermore, this new model is able to estimate translations of multiple query words simultaneously. This is in contrast to many previous approaches where translations of individual query words are determined independently. Empirical studies with TREC datasets have shown that the maximum coherence model achieves a relative 10% - 40% improvement in cross-language information retrieval, comparing to other approaches that also use word co-occurrence statistics for sense disambiguation.
1966938
Robust midsagittal plane extraction from normal and pathological 3-D neuroradiology images
This paper focuses on extracting the ideal midsagittal plane (iMSP) from three-dimensional (3-D) normal and pathological neuroimages. The main challenges in this work are the structural asymmetry that may exist in pathological brains, and the anisotropic, unevenly sampled image data that is common in clinical practice. We present an edge-based, cross-correlation approach that decomposes the plane fitting problem into discovery of two-dimensional symmetry axes on each slice, followed by a robust estimation of plane parameters. The algorithm's tolerance to brain asymmetries, input image offsets and image noise is quantitatively evaluated. We find that the algorithm can extract the iMSP from input 3-D images with 1) large asymmetrical lesions; 2) arbitrary initial rotation offsets; 3) low signal-to-noise ratio or high bias field. The iMSP algorithm is compared with an approach based on maximization of mutual information registration, and is found to exhibit superior performance under adverse conditions. Finally, no statistically significant difference is found between the midsagittal plane computed by the iMSP algorithm and that estimated by two trained neuroradiologists.
5940493
Efficient schema design for a pharmaceutical data repository
Large scientific databases often consist of heterogeneous components that differ in the number of attributes and the number of tuples. In this paper, we show that increased performance is achieved when a complex schema is used to represent different components of a data repository. The driving application used in this study is a pharmaceutical drug repository. The types of access patterns associated with this repository consist of the retrieval of a selected set of attribute values for a consecutive or a random set of tuples. These consecutive and random access patterns, which are typical of a drug discovery experiment, are used to measure the data retrieval throughput for different schemas.