15309050
Prediction of Transmembrane Helical Segments in Membrane Proteins Using Back Propagation Neural Network with Wavelet Analysis
Transmembrane proteins possess important physiological function. The increasing transmembrane protein sequences from genome projects raise the needs for theoretical methods to predict their structures, especially transmembrane helical segments (TMHs). wnnTM, a new method of BP neural network based on wavelet multiresolution analysis (MRA) is initially developed to predict the number and location of TMHs in membrane proteins. 80 proteins with known 3D-structure randomly selected from Mptopo database are used as test set to evaluate the prediction accuracy of the method. The final results indicate that the proposed method is more effective than BP neural network model only.
35252339
Hybrid Control of Hopf Bifurcation for an Internet Congestion Model
In this paper, the problem of Hopf bifurcation control for an Internet congestion model with time delays is considered by using a new hybrid control strategy, in which state feedback and parameter perturbation are used. It is well known that for the system without control, as the positive gain parameter of the system passes a critical point, Hopf bifurcation occurs. To control the Hopf bifurcation, a hybrid control strategy is proposed and the onset of an inherent bifurcation is delayed (advanced) when such bifurcation is undesired (desired). Furthermore, the dynamic behaviors of the controlled system can also be changed by choosing appropriate control parameters. Numerical simulation results confirm that the new control strategy is efficient in controlling Hopf bifurcation.
14866925
A new edge detector based on Fresnel diffraction
This paper proposed an edge detection scheme which is deduced from Fresnel diffraction. Analysis in this paper shows that Fresnel convolution kernel function performs well on edge enhancement when images are transformed into complex functions. Due to its mathematical complexity, the method is simplified into a linear convolution filter. The new edge detector is designed based on the simplified linear filter. Experimental results indicate that the new detector gives quantitative results equal to the Canny detector while it is more simple to be implemented.
39489918
An economical contour extraction algorithm for understanding large-size engineering drawings
An algorithm is described which produces the extraction of an object's contours in a binary image while storing only two raster lines at a time during processing. The major data structure used is a block adjacency graph which occupies much less space (typically one hundredth) than the original image. Because this algorithm has very low costs of memory space and processing time, it is a powerful tool for processing large-size engineering drawings. Applications of the method to the recognition of some loop-structure logical symbols are described.<<ETX>>
18279965
Information in the Nonstationary Case
Information estimates such as the direct method of Strong, Koberle, de Ruyter van Steveninck, and Bialek (1998) sidestep the difficult problem of estimating the joint distribution of response and stimulus by instead estimating the difference between the marginal and conditional entropies of the response. While this is an effective estimation strategy, it tempts the practitioner to ignore the role of the stimulus and the meaning of mutual information. We show here that as the number of trials increases indefinitely, the direct (or plug-in) estimate of marginal entropy converges (with probability 1) to the entropy of the time-averaged conditional distribution of the response, and the direct estimate of the conditional entropy converges to the time-averaged entropy of the conditional distribution of the response. Under joint stationarity and ergodicity of the response and stimulus, the difference of these quantities converges to the mutual information. When the stimulus is deterministic or nonstationary the direct estimate of information no longer estimates mutual information, which is no longer meaningful, but it remains a measure of variability of the response distribution across time.
16993095
Genetic Polymorphisms of Nine X-STR Loci in Four Population Groups from Inner Mongolia, China
Nine short tandem repeat (STR) markers on the X chromosome (DXS101, DXS6789, DXS6799, DXS6804, DXS7132, DXS7133, DXS7423, DXS8378, and HPRTB) were analyzed in four population groups (Mongol, Ewenki, Oroqen, and Daur) from Inner Mongolia, China, in order to learn about the genetic diversity, forensic suitability, and possible genetic affinities of the populations. Frequency estimates, Hardy-Weinberg equilibrium, and other parameters of forensic interest were computed. The results revealed that the nine markers have a moderate degree of variability in the population groups. Most heterozygosity values for the nine loci range from 0.480 to 0.891, and there are evident differences of genetic variability among the populations. A UPGMA tree constructed on the basis of the generated data shows very low genetic distance between Mongol and Han (Xi'an) populations. Our results based on genetic distance analysis are consistent with the results of earlier studies based on linguistics and the immigration history and origin of these populations. The minisatellite loci on the X chromosome studied here are not only useful in showing significant genetic variation between the populations, but also are suitable for human identity testing among Inner Mongolian populations.
17737533
Semantic Matching of Web Services Based on Choreographies
Web services facilitate the efficient execution of B2B e-commerce by integrating business processes over the Internet, which needs dynamic and flexible binding of services. However, current Web service standards do not support it. A formal approach for semantic matching of service specifications based on choreographies, i.e., the behavior of Web services, is developed in this paper. It can accurately and automatically discover required services for integrating business processes. Firstly an extended deterministic finite state automaton (EDFA) is proposed by labeling state transitions using binary-tuples (input, output) rather than letters. The automata describe Web services in a more accurate way: the nodes represent states maintained by services; the state transitions represent communication activities of services. The automata depict the temporal sequences of communication activities that describe the behaviors of services. Further, the intersection of two EDFAs is defined. Finally, an algorithm for testing the emptiness of the languages accepted by EDFAs is presented and used to evaluate the compatibility of Web services