2768791
Finding representative set from massive data
In the information age, data is pervasive. In some applications, data explosion is a significant phenomenon. The massive data volume poses challenges to both human users and computers. In this project, we propose a new model for identifying representative set from a large database. A representative set is a special subset of the original dataset, which has three main characteristics: It is significantly smaller in size compared to the original dataset. It captures the most information from the original dataset compared to other subsets of the same size. It has low redundancy among the representatives it contains. We use information-theoretic measures such as mutual information and relative entropy to measure the representativeness of the representative set. We first design a greedy algorithm and then present a heuristic algorithm that delivers much better performance. We run experiments on two real datasets and evaluate the effectiveness of our representative set in terms of coverage and accuracy. The experiments show that our representative set attains expected characteristics and captures information more efficiently.
11841640
Accelerating Profile Queries in Elevation Maps
Elevation maps are a widely used spatial data representation in geographical information systems (GIS). Paths on elevation maps can be characterized by profiles, which describe relative elevation as a function of distance. In this research, we address the inverse of this mapping - given a profile, how to efficiently find paths that could have generated it. This is called the profile query problem. Profiles have a wide variety of uses that include registering tracking information, or even other maps, to a given map. We describe a probabilistic model to characterize the maximal likelihood that a point lying on a path matches the query profile. Propagation of such probabilities to neighboring points can effectively prune the search space. This model enables us to efficiently answer queries of arbitrary profiles with user-specified error tolerances. When compared to existing spatial index methods, our approach supports more flexible queries with orders of magnitude speedup.
108674
Sample Selection for Maximal Diversity
The problem of selecting a sample subset sufficient to preserve diversity arises in many applications. One example is in the design of recombinant inbred lines (RIL) for genetic association studies. In this context, genetic diversity is measured by how many alleles are retained in the resulting inbred strains. RIL panels that are derived from more than two parental strains, such as the collaborative cross (Churchill et al., 2004), present a particular challenge with regard to which of the many existing lab mouse strains should be included in the initial breeding funnel in order to maximize allele retention. A similar problem occurs in the study of customer reviews when selecting a subset of products with a maximal diversity in reviews. Diversity in this case implies the presence of a set of products having both positive and negative ranks for each customer. In this paper, we demonstrate that selecting an optimal diversity subset is an NP-complete problem via reduction to set cover. This reduction is sufficiently tight that greedy approximations to the set cover problem directly apply to maximizing diversity. We then suggest a slightly modified subset selection problem in which an initial greedy diversity solution is used to effectively prune an exhaustive search for all diversity subsets bounded from below by a specified coverage threshold. Extensive experiments on real datasets are performed to demonstrate the effectiveness and efficiency of our approach.
9042204
CRD: fast co-clustering on large datasets utilizing sampling-based matrix decomposition
The problem of simultaneously clustering columns and rows (co-clustering) arises in important applications, such as text data mining, microarray analysis, and recommendation system analysis. Compared with the classical clustering algorithms, co-clustering algorithms have been shown to be more effective in discovering hidden clustering structures in the data matrix. The complexity of previous co-clustering algorithms is usually O(m X n), where m and n are the numbers of rows and columns in the data matrix respectively. This limits their applicability to data matrices involving a large number of columns and rows. Moreover, some huge datasets can not be entirely held in main memory during co-clustering which violates the assumption made by the previous algorithms. In this paper, we propose a general framework for fast co-clustering large datasets, CRD. By utilizing recently developed sampling-based matrix decomposition methods, CRD achieves an execution time linear in m and n. Also, CRD does not require the whole data matrix be in the main memory. We conducted extensive experiments on both real and synthetic data. Compared with previous co-clustering algorithms, CRD achieves competitive accuracy but with much less computational cost.
268487
Mining non-redundant high order correlations in binary data
Many approaches have been proposed to find correlations in binary data. Usually, these methods focus on pair-wise correlations. In biology applications, it is important to find correlations that involve more than just two features. Moreover, a set of strongly correlated features should be non-redundant in the sense that the correlation is strong only when all the interacting features are considered together. Removing any feature will greatly reduce the correlation.In this paper, we explore the problem of finding non-redundant high order correlations in binary data. The high order correlations are formalized using multi-information, a generalization of pairwise mutual information. To reduce the redundancy, we require any subset of a strongly correlated feature subset to be weakly correlated. Such feature subsets are referred to as Non-redundant Interacting Feature Subsets (NIFS). Finding all NIFSs is computationally challenging, because in addition to enumerating feature combinations, we also need to check all their subsets for redundancy. We study several properties of NIFSs and show that these properties are useful in developing efficient algorithms. We further develop two sets of upper and lower bounds on the correlations, which can be incorporated in the algorithm to prune the search space. A simple and effective pruning strategy based on pair-wise mutual information is also developed to further prune the search space. The efficiency and effectiveness of our approach are demonstrated through extensive experiments on synthetic and real-life datasets.
765245
CARE: Finding Local Linear Correlations in High Dimensional Data
Finding latent patterns in high dimensional data is an important research problem with numerous applications. Existing approaches can be summarized into 3 categories: feature selection, feature transformation (or feature projection) and projected clustering. Being widely used in many applications, these methods aim to capture global patterns and are typically performed in the full feature space. In many emerging biomedical applications, however, scientists are interested in the local latent patterns held by feature subsets, which may be invisible via any global transformation. In this paper, we investigate the problem of finding local linear correlations in high dimensional data. Our goal is to find the latent pattern structures that may exist only in some subspaces. We formalize this problem as finding strongly correlated feature subsets which are supported by a large portion of the data points. Due to the combinatorial nature of the problem and lack of monotonicity of the correlation measurement, it is prohibitively expensive to exhaustively explore the whole search space. In our algorithm, CARE, we utilize spectrum properties and effective heuristic to prune the search space. Extensive experimental results show that our approach is effective in finding local linear correlations that may not be identified by existing methods.
6961558
Minimizing a stochastic maximum-reliability path
We consider a stochastic network interdiction problem in which the goal is to detect an evader, who selects a maximum-reliability path. Subject to a resource constraint, the interdictor installs sensors on a subset of the network’s arcs to minimize the value of the evader’s maximum-reliability path, i.e., to maximize the detection probability. When this decision is made, the evader’s origin–destination pair is known to the interdictor only through a probability distribution. Our model is framed as a stochastic mixed-integer program and solved by an enhanced L-shaped decomposition method. Our primary enhancement is via a valid inequality, which we call a step inequality. In earlier work [Morton et al., IIE Trans 39 (2007), 3–14], we developed step inequalities for the special case in which the evader encounters at most one sensor on an origin–destination path. Here, we generalize the step inequality to the case where the evader encounters multiple sensors. In this more general setting, the step inequality is tightly coupled to the decomposition scheme. An efficient separation algorithm identifies violated step inequalities and strengthens the linear programming relaxation of the L-shaped method’s master program. We apply this solution procedure with further computational enhancements to a collection of test problems. © 2008 Wiley Periodicals, Inc. NETWORKS, Vol. 52(3), 111–119 2008
7351167
Fast intermode decision in H.264/AVC video coding
The new video coding standard, H.264/MPEG-4 AVC, uses variable block sizes ranging from 4/spl times/4 to 16/spl times/16 in interframe coding. This new feature has achieved significant coding gain compared to coding a macroblock (MB) using fixed block size. However, this feature results in extremely high computational complexity when brute force rate distortion optimization (RDO) algorithm is used. This paper proposes a fast intermode decision algorithm to decide the best mode in intercoding. It makes use of the spatial homogeneity and the temporal stationarity characteristics of video objects. Specifically, spatial homogeneity of a MB is decided based on the MB's edge intensity, and temporal stationarity is decided by the difference of the current MB and it colocated counterpart in the reference frame. Based on the homogeneity and stationarity of the video objects, only a small number of intermodes are selected in the RDO process. The experimental results show that the fast intermode decision algorithm is able to reduce on the average 30% encoding time, with a negligible peak signal-to-noise ratio loss of 0.03 dB or, equivalently, a bit rate increment of 0.6%.
14116036
Measuring blocking artifacts using edge direction information
Block-based transform coding is the most popular approach for image and video compression. The objective measurement of blocking artifacts plays an important role in the design, optimization, and assessment of image and video coding systems. This paper presents a new algorithm for measuring blocking artifacts in images and videos. Instead of using the traditional pixel discontinuity along the block boundary, we use the edge directional information of the images. The new algorithm does not need the exact location of the block boundary thus is invariant to the displacement, rotation and scaling of the images. Experiments on various still images and videos show that the new blockiness measure is very efficient in terms of computational complexity and memory usage, and can produce blocking artifacts measurement consistent with subjective rating.
16938513
Robust procedures for obtaining assembly contact state extremal configurations
Two important components in the selection of an admittance that facilitates force-guided assembly are the identification of: 1) the set of feasible contact states, and 2) the set of configurations that span each contact state, i.e., the extremal configurations. We present a procedure to automatically generate both sets from CAD models of the assembly parts. In the procedure, all possible combinations of principle contacts are considered when generating hypothesized contact states. The feasibility of each is then evaluated in a genetic algorithm based optimization procedure. The maximum and minimum value of each of the 6 configuration variables spanning each contact state are obtained by again using genetic algorithms. Together, the genetic algorithm approach, the hierarchical data structure containing the states, the relationships among the states, and the extremals within each state are used to provide a reliable means of identifying all feasible contact states and their associated extremal configurations.
6386536
Temporal Arithmetic Mixing Months and Days
In this paper, we present our work on creating a complete set of rules for temporal arithmetic mixing months and days based on the "history-dependent intuition". Many examples are presented for demonstrating how the rules are used and how the computations satisfy various desired arithmetic properties, such as the subtraction, commutativity and associativity properties. A notion of "days lost" (DL) is proposed to concisely keep track of the history of the temporal arithmetic computation and explain possible inconsistencies in terms of different desired properties