( Prokaryotes ( ( are ( represented ( by ( ( ( ( ( two ( separate domains ) ) , ) ( the Bacteria ) ) and ) Archaea ) ) ) ) . ) )
(ROOT (S (NP (NNS Prokaryotes)) (VP (VBP are) (VP (VBN represented) (PP (IN by) (NP (NP (CD two) (JJ separate) (NNS domains)) (, ,) (NP (DT the) (NNS Bacteria)) (CC and) (NP (NNP Archaea)))))) (. .)))
Prokaryotes are represented by two separate domains, the Bacteria and Archaea.
(ROOT (S (NP (NNS Bacteria) (CC and) (NNS archaea)) (VP (VBP are) (NP (NP (NNS examples)) (PP (IN of) (NP (NNS prokaryotes))))) (. .)))