( ( ( The nucleotides ) ( on one ) ) ( ( ( strand ( of ( DNA pair ) ) ) ( with ( those ( on ( the other ) ) ) ) ) . ) )
(ROOT (S (NP (NP (DT The) (NNS nucleotides)) (PP (IN on) (NP (CD one)))) (VP (VBD strand) (PP (IN of) (NP (NN DNA) (NN pair))) (PP (IN with) (NP (NP (DT those)) (PP (IN on) (NP (DT the) (JJ other)))))) (. .)))
The nucleotides on one strand of DNA pair with those on the other.
(ROOT (S (ADVP (RB Deletions)) (VP (VB remove) (NP (NP (QP (CD one) (CC or) (JJR more)) (NNS nucleotides)) (PP (IN from) (NP (DT the) (NN dna)))))))