We propose a novel probabilistic dimensionality reduction framework that can naturally integrate the generative model and the locality information of data. Based on this framework, we present a new model, which is able to learn a smooth skeleton of embedding points in a low-dimensional space from high-dimensional noisy data. The formulation of the new model can be equivalently interpreted as two coupled learning problem, i.e., structure learning and the learning of projection matrix. This interpretation motivates the learning of the embedding points that can directly form an explicit graph structure. We develop a new method to learn the embedding points that form a spanning tree, which is further extended to obtain a discriminative and compact feature representation for clustering problems. Unlike traditional clustering methods, we assume that centers of clusters should be close to each other if they are connected in a learned graph, and other cluster centers should be distant. This can greatly facilitate data visualization and scientific discovery in downstream analysis. Extensive experiments are performed that demonstrate that the proposed framework is able to obtain discriminative feature representations, and correctly recover the intrinsic structures of various real-world datasets.
From the Publisher: In the 1990s, a new type of learning algorithm was developed, based on results from statistical learning theory: the Support Vector Machine (SVM). This gave rise to a new class of theoretically elegant learning machines that use a central concept of SVMs-kernels--for a number of learning tasks. Kernel machines provide a modular framework that can be adapted to different tasks and domains by the choice of the kernel function and the base algorithm. They are replacing neural networks in a variety of fields, including engineering, information retrieval, and bioinformatics. Learning with Kernels provides an introduction to SVMs and related kernel methods. Although the book begins with the basics, it also includes the latest research. It provides all of the concepts necessary to enable a reader equipped with some basic mathematical knowledge to enter the world of machine learning using theoretically well-founded yet easy-to-use kernel algorithms and to understand and apply the powerful algorithms that have been developed over the last few years.