We propose an approach for biomedical information extraction that marries the advantages of machine learning models, e.g., learning directly from data, with the benefits of rule-based approaches, e.g., interpretability. Our approach starts by training a feature-based statistical model, then converts this model to a rule-based variant by converting its features to rules, and "snapping to grid" the feature weights to discrete votes. In doing so, our proposal takes advantage of the large body of work in machine learning, but it produces an interpretable model, which can be directly edited by experts. We evaluate our approach on the BioNLP 2009 event extraction task. Our results show that there is a small performance penalty when converting the statistical model to rules, but the gain in interpretability compensates for that: with minimal effort, human experts improve this model to have similar performance to the statistical model that served as starting point.
In natural language acquisition, it is dicult to gather the annotated data needed for supervised learning; however, unannotated data is fairly plentiful. Active learning methods attempt to select for annotation and training only the most informative examples, and therefore are potentially very useful in natural language applications. However, existing results for active learning have only considered standard classication tasks. To reduce annotation eort while maintaining accuracy, we apply active learning to two non-classication tasks in natural language processing: semantic parsing and information extraction. We show that active learning can signicantly reduce the number of annotated examples required to achieve a given level of performance for these complex tasks.