We present a prototype of a software tool for exploration of multiple combinatorial optimisation problems in large real-world and synthetic complex networks. Our tool, called GraphCombEx (an acronym of Graph Combinatorial Explorer), provides a unified framework for scalable computation of high-quality suboptimal solutions and bounds for a number of widely studied combinatorial optimisation problems in large graphs. The problems currently supported include: maximum clique, graph colouring, maximum independent set, minimum vertex clique covering, minimum dominating set, as well as the longest simple cycle problem. Suboptimal solutions and intervals for optimal objective values are estimated using scalable heuristics. GraphCombEx has previously or currently been tested in scenarios of exploring synthetic graph models, as well as real-world networks ranging from social network samples, biological networks, to very large networks from the SNAP network data repository. The tool has already been successfully used to support a number of recent studies and is particularly beneficial in exploring the combinatorial properties of previously unseen network data, before applying more sophisticated custom optimisation algorithms.
Graphviz is a heterogeneous collection of graph drawing tools containing batch layout programs (dot, neato, fdp, twopi); a platform for incremental layout (Dynagraph); customizable graph editors (dotty, Grappa); a server for including graphs in Web pages (WebDot); support for graphs as COM objects (Montage); utility programs useful in graph visualization; and libraries for attributed graphs. The software is available under an Open Source license. The article[1] provides a detailed description of the package.