In the field of connectomics, neuroscientists seek to identify cortical connectivity comprehensively. Neuronal boundary detection from the Electron Microscopy (EM) images is often done to assist the automatic reconstruction of neuronal circuit. But the segmentation of EM images is a challenging problem, as it requires the detector to be able to detect both filament-like thin and blob-like thick membrane, while suppressing the ambiguous intracellular structure. In this paper, we propose multi-stage multi-recursive-input fully convolutional networks to address this problem. The multiple recursive inputs for one stage, i.e., the multiple side outputs with different receptive field sizes learned from the lower stage, provide multi-scale contextual boundary information for the consecutive learning. This design is biologically-plausible, as it likes a human visual system to compare different possible segmentation solutions to address the ambiguous boundary issue. Our multi-stage networks are trained end-to-end. It achieves promising results on two public available EM segmentation datasets, the mouse piriform cortex dataset and the ISBI 2012 EM dataset.
We present a very efficient, highly accurate, “Explicit Shape Regression” approach for face alignment. Unlike previous regression-based approaches, we directly learn a vectorial regression function to infer the whole facial shape (a set of facial landmarks) from the image and explicitly minimize the alignment errors over the training data. The inherent shape constraint is naturally encoded into the regressor in a cascaded learning framework and applied from coarse to fine during the test, without using a fixed parametric shape model as in most previous methods. To make the regression more effective and efficient, we design a two-level boosted regression, shape-indexed features and a correlation-based feature selection method. This combination enables us to learn accurate models from large training data in a short time (20 minutes for 2,000 training images), and run regression extremely fast in test (15 ms for a 87 landmarks shape). Experiments on challenging data show that our approach significantly outperforms the state-of-the-art in terms of both accuracy and efficiency.   Contextual information plays an important role in solving vision problems such as image segmentation. However, extracting contextual information and using it in an effective way remains a difficult problem. To address this challenge, we propose a multi-resolution contextual framework, called cascaded hierarchical model (CHM), which learns contextual information in a hierarchical framework for image segmentation. At each level of the hierarchy, a classifier is trained based on down sampled input images and outputs of previous levels. Our model then incorporates the resulting multi-resolution contextual information into a classifier to segment the input image at original resolution. We repeat this procedure by cascading the hierarchical framework to improve the segmentation accuracy. Multiple classifiers are learned in the CHM, therefore, a fast and accurate classifier is required to make the training tractable. The classifier also needs to be robust against over fitting due to the large number of parameters learned during training. We introduce a novel classification scheme, called logistic disjunctive normal networks (LDNN), which consists of one adaptive layer of feature detectors implemented by logistic sigmoid functions followed by two fixed layers of logical units that compute conjunctions and disjunctions, respectively. We demonstrate that LDNN outperforms state-of-the-art classifiers and can be used in the CHM to improve object segmentation performance. The launch of Xbox Kinect has built a very successful computer vision product and made a big impact to the gaming industry; this sheds lights onto a wide variety of potential applications related to action recognition. The accurate estimation of human poses from the depth image is universally a critical step. However, existing pose estimation systems exhibit failures when faced severe occlusion. In this paper, we propose an exemplar-based method to learn to correct the initially estimated poses. We learn an inhomogeneous systematic bias by leveraging the exemplar information within specific human action domain. Our algorithm is illustrated on both joint-based skeleton correction and tag prediction. In the experiments, significant improvement is observed over the contemporary approaches, including what is delivered by the current Kinect system. Existing methods for pixel-wise labelling tasks generally disregard the underlying structure of labellings, often leading to predictions that are visually implausible. While incorporating structure into the model should improve prediction quality, doing so is challenging - manually specifying the form of structural constraints may be impractical and inference often becomes intractable even if structural constraints are given. We sidestep this problem by reducing structured prediction to a sequence of unconstrained prediction problems and demonstrate that this approach is capable of automatically discovering priors on shape, contiguity of region predictions and smoothness of region contours from data without any a priori specification. On the instance segmentation task, this method outperforms the state-of-the-art, achieving a mean @math of 63.6 at 50 overlap and 43.3 at 70 overlap. The notion of using context information for solving high-level vision problems has been increasingly realized in the field. However, how to learn an effective and efficient context model, together with the image appearance, remains mostly unknown. The current literature using Markov random fields (MRFs) and conditional random fields (CRFs) often involves specific algorithm design, in which the modeling and computing stages are studied in isolation. In this paper, we propose an auto-context algorithm. Given a set of training images and their corresponding label maps, we first learn a classifier on local image patches. The discriminative probability (or classification confidence) maps by the learned classifier are then used as context information, in addition to the original image patches, to train a new classifier. The algorithm then iterates to approach the ground truth. Auto-context learns an integrated low-level and context model, and is very general and easy to implement. Under nearly the identical parameter setting in the training, we apply the algorithm on three challenging vision applications: object segmentation, human body configuration, and scene region labeling. It typically takes about 30 70 seconds to run the algorithm in testing. Moreover, the scope of the proposed algorithm goes beyond high-level vision. It has the potential to be used for a wide variety of problems of multi-variate labeling.