@parameterized.parameters(*variant_caller.CANONICAL_DNA_BASES)
def test_gvcf_basic(self, ref):
    options = _reference_model_options(0.01, 100)
    caller = PlaceholderVariantCaller(0.01, 100)
    allele_counter = self.fake_allele_counter(100, [(0, 0, ref)])
    gvcfs = list(caller.make_gvcfs(allele_counter.summary_counts()))
    self.assertLen(gvcfs, 1)
    self.assertGVCF(gvcfs[0], ref=ref, gq=1.0, start=100, end=101, min_dp=0, chrom='chr1', gls=([(- 0.47712125472)] * 3), sample_name=options.sample_name)
@parameterized.parameters(*variant_caller.CANONICAL_DNA_BASES)
def test_gvcf_basic(self, ref):
    options = _reference_model_options(0.01, 100)
    caller = PlaceholderVariantCaller(0.01, 100)
    allele_counter = self.fake_allele_counter(100, [(0, 0, ref)])
    gvcfs = list(caller.make_gvcfs(allele_counter.summary_counts()))
    self.assertLen(gvcfs, 1)
    self.assertGVCF(gvcfs[0], ref=ref, gq=1.0, start=100, end=101, min_dp=0, chrom='chr1', gls=([(- 0.47712125472)] * 3), sample_name=options.sample_name)