Tagetitoxin

Tagetitoxin (TGT) is a bacterial phytotoxin produced by "Pseudomonas syringae pv. tagetis".
Chemical structure.
When TGT was first isolated, it was only partially characterized. The first proposed chemical structure of TGT involved an eight-membered ring, but this was revised shortly afterward to a bicyclic structure (shown at right) based on NMR and mass spectrometry. This structure, however, has been questioned. The absolute configuration remains undetermined, and attempts at confirming the structure by organic synthesis are underway. Recently Porter et al. published a revised structure of TGT based on extensive 2D NMR data.
Mechanism of action.
TGT interferes with development of chloroplasts in young plant leaves thereby causing chlorosis. The natural target of the toxin is chloroplast RNA polymerase. Chloroplast RNA polymerase belongs to ubiquitous family of multisubunit RNA polymerases (RNAP) and is most closely related to bacterial enzymes. "In vitro", TGT inhibits bacterial RNAPs from "Escherichia coli" and "Thermus thermophilus", and eukaryotic RNA polymerase III. In contrast, eukaryotic RNA polymerase I and II as well as single-subunit RNA polymerases of bacteriophage T7 and SP6 are relatively insensitive to the compound. TGT binds in the RNAP active site and inhibits initiation and elongation phases of transcription as well as pyrophosphorolysis of the nascent RNA. However, the detailed mechanism of inhibition remains a subject of heated debate.
It has been suggested that TGT forms a ternary RNAP-NTP-TGT complex and inhibits phosphodiester bond synthesis either by binding an inhibitory magnesium ion or by trapping a flexible active site domain in an inactive conformation. The third theory suggests that TGT forms predominantly a binary RNAP-TGT complex and inhibits RNAP translocation along the DNA by mimicking the transcription byproduct pyrophosphate.