Regulation of mitochondrial fusion by the F-box protein Mdm30 involves proteasome-independent turnover of Fzo1

Mitochondrial morphology depends on balanced fusion and fission events. A central component of the mitochondrial fusion apparatus is the conserved GTPase Fzo1 in the outer membrane of mitochondria. Mdm30, an F-box protein required for mitochondrial fusion in vegetatively growing cells, affects the cellular Fzo1 concentration in an unknown manner. We demonstrate that mitochondrial fusion requires a tight control of Fzo1 levels, which is ensured by Fzo1 turnover. Mdm30 binds to Fzo1 and, dependent on its F-box, mediates proteolysis of Fzo1. Unexpectedly, degradation occurs along a novel proteolytic pathway not involving ubiquitylation, Skp1–Cdc53–F-box (SCF) E3 ubiquitin ligase complexes, or 26S proteasomes, indicating a novel function of an F-box protein. This contrasts to the ubiquitin- and proteasome-dependent turnover of Fzo1 in α-factor–arrested yeast cells. Our results therefore reveal not only a critical role of Fzo1 degradation for mitochondrial fusion in vegetatively growing cells but also the existence of two distinct proteolytic pathways for the turnover of mitochondrial outer membrane proteins.


Introduction
Mitochondria are essential organelles whose structure and function adapt to different cellular conditions through continuous fusion and fi ssion events (Okamoto and Shaw, 2005). Mitochondrial dynamics exert essential physiological and developmental roles, regulate apoptotic processes, and affect energy production within mitochondria (Chen and Chan, 2005). Two neuropathies, Charcot-Marie-Tooth type 2A and autosomal dominant optic atrophy, are caused by mutations in essential fusion components, namely, mitofusin 2 or OPA1 (Chen and Chan, 2005). Although several components involved in fusion have been identifi ed, many of them in yeast, molecular mechanisms underlying mitochondrial fusion events are poorly understood. A central role has been assigned to yeast Fzo1 in the outer membrane of mitochondria (or to its mammalian homologues mitofusin 1 and 2) as part of a fusion complex that also contains Ugo1 and Mgm1 in yeast (Meeusen and Nunnari, 2005).
Less clear is the role of the F-box protein Mdm30, whose loss leads to the accumulation of aggregated and fragmented mitochondria (Fritz et al., 2003). Among the 21 annotated proteins of Saccharomyces cerevisiae with an F-box motif (Willems et al., 2004), some assemble in Skp1-Cdc53-F-box (SCF) E3 ubiquitin ligase complexes, which mediate proteasomal proteolysis of specifi c substrates (Petroski and Deshaies, 2005). Indeed, Mdm30 has been linked to the turnover of the transcription factor Gal4 in the nucleus (Muratani et al., 2005). Mdm30 was not only localized to the cytosolic fraction but also found in association with mitochondria (Fritz et al., 2003). Therefore, in analogy to the degradation of resident ER proteins, Mdm30 may affect mitochondrial dynamics by coupling the mitochondrial fusion machinery to the ubiquitin-proteasome system (UPS) in the cytosol. Consistently, accumulation of Fzo1 has been observed in cells lacking Mdm30 (Fritz et al., 2003). However, it remained unclear whether this indeed refl ects Mdm30-dependent proteolysis of Fzo1 and whether the UPS is involved. Notably, 26S proteasomes have been linked to the degradation of Fzo1 in α-factor-arrested yeast cells (Neutzner and Youle, 2005). However, degradation does not depend on Mdm30 under these conditions (Neutzner and Youle, 2005). Moreover, the involvement of 26S proteasomes remained controversial, as only proteasome inhibitors have been used, which are known to be effective only in yeast cells with Regulation of mitochondrial fusion by the F-box protein Mdm30 involves proteasome-independent turnover of Fzo1 Mafalda Escobar-Henriques, 1 Benedikt Westermann, 2 and Thomas Langer 1 1 Institute of Genetics and Center for Molecular Medicine, University of Cologne, D-50923 Cologne, Germany 2 Institute of Cell Biology, University of Bayreuth, D-95447 Bayreuth, Germany M itochondrial morphology depends on balanced fusion and fi ssion events. A central component of the mitochondrial fusion apparatus is the conserved GTPase Fzo1 in the outer membrane of mitochondria. Mdm30, an F-box protein required for mitochondrial fusion in vegetatively growing cells, affects the cellular Fzo1 concentration in an unknown manner. We demonstrate that mitochondrial fusion requires a tight control of Fzo1 levels, which is ensured by Fzo1 turnover. Mdm30 binds to Fzo1 and, dependent on its F-box, mediates proteolysis of Fzo1. Unexpectedly, degradation occurs along a novel proteolytic pathway not involving ubiquitylation, Skp1-Cdc53-F-box (SCF) E3 ubiquitin ligase complexes, or 26S proteasomes, indicating a novel function of an F-box protein. This contrasts to the ubiquitinand proteasome-dependent turnover of Fzo1 in α-factorarrested yeast cells. Our results therefore reveal not only a critical role of Fzo1 degradation for mitochondrial fusion in vegetatively growing cells but also the existence of two distinct proteolytic pathways for the turnover of mitochondrial outer membrane proteins.
We have analyzed the role of Mdm30 for the regulation of mitochondrial dynamics and demonstrate for the fi rst time Mdm30-dependent proteolysis of Fzo1 in vegetatively growing yeast cells. Mdm30 is part of a novel proteolytic pathway that does not involve SCF complexes and 26S proteasomes and thus is strikingly different to the proteasomal degradation of Fzo1 in α-factor-arrested yeast cells.

Mdm30-dependent and -independent degradation of Fzo1
The accumulation of Fzo1 in ∆mdm30 cells suggests that the F-box protein Mdm30 is involved in the degradation of Fzo1 ( Fig. 1 A; Fritz et al., 2003). We therefore assessed the stability of Fzo1 in wild-type and ∆mdm30 cells after inhibition of protein synthesis with cycloheximide. This analysis revealed that Fzo1 is constitutively degraded in wild-type cells, whereas it remained stable in the absence of Mdm30 ( Fig. 1 A). Similar experiments were performed in yeast cells in the exponential or post-diauxic-shift phase, but a signifi cant dependence of Fzo1 stability on the growth phase was not observed (Fig. 1 A). To distinguish between complete Fzo1 turnover and processing, we followed Fzo1 degradation using antibodies directed against either the NH 2 -terminal GTPase domain or a peptide located at the COOH-terminal segment of Fzo1. Moreover, the stability of an Fzo1 variant carrying an NH 2 -terminal HA tag was examined. As no proteolytic fragments of Fzo1 were detected, we conclude that Fzo1 is completely degraded in an Mdm30dependent manner.
Mdm30 might affect the localization and/or complex assembly of Fzo1 and thereby affect Fzo1 stability and mitochondrial fusion. Therefore, mitochondrial and postmitochondrial supernatant fractions of wild-type and ∆mdm30 cells were ana-lyzed for the presence of Fzo1 (Fig. 1 B). Regardless of the presence of Mdm30, Fzo1 was recovered from the mitochondrial fraction, which also contained the mitochondrial outer membrane protein Tom40 but was devoid of the soluble cytosolic protein Tpi1 (Fig. 1 B). Fzo1 assembles into an 850-kD complex in wild-type cells (Rapaport et al., 1998) and was found to be present in a complex of the same size in ∆mdm30 cells (Fig. 1 C). Thus, Mdm30 does not affect the assembly of Fzo1 in the outer membrane of mitochondria.
Fzo1 was recently reported to be degraded upon mating factor-induced cell cycle arrest (Neutzner and Youle, 2005;Fig. 1 D). Intriguingly, under these conditions, proteolysis occurs independent of Mdm30 (Neutzner and Youle, 2005;Fig. 1 D) or any other nonessential yeast gene encoding an F-box protein (unpublished data). We therefore conclude that Fzo1 is degraded along two physiologically and mechanistically distinct pathways, one prevalent in vegetatively growing cells and the other in α-factor-arrested cells.

Mdm30 binds to Fzo1 and mediates proteolysis in an F-box-dependent manner
To assess the requirement of the Mdm30 F-box motif for Fzo1 degradation, four conserved amino acid residues within the motif were replaced, namely, L19P, P20A, E22Q, and I23A ( Fig. 2 A). In a second construct, the entire F-box was deleted (amino acids 1-58; Fig. 2 A, ∆F-box). Wild-type or mutant forms of Mdm30 were found in equal association with mitochondria upon subcellular fractionation (unpublished data). After expression in wildtype and ∆mdm30 strains, the steady-state level of Fzo1 was monitored by immunoblotting. In wild-type cells, the steady-state concentration of Fzo1 was unaffected by the presence of the mutant Mdm30 forms (Fig. 2 B). In ∆mdm30 cells, however, only wildtype Mdm30 but not Mdm30 variants with a defective F-box were able to restore degradation and low Fzo1 steady-state concentrations ( Fig. 2 B). These results demonstrate that proteolysis of Fzo1 depends on the integrity of the Mdm30 F-box. Exponentially growing wild-type (wt) and ∆mdm30 cells were split by differential centrifugation into a mitochondrial (pellet) and a cytosolic (sup) fraction as described previously (Rapaport et al., 1998). The fractions were analyzed by SDS-PAGE and immunoblotting for the presence of Fzo1. The mitochondrial outer membrane protein Tom40 and the cytosolic protein Tpi1 were used as marker proteins to validate the fractionation. (C) Complex formation of Fzo1 in the mitochondrial outer membrane. Mitochondrial membranes of wild-type and ∆mdm30 cells were solubilized in Triton X-100 and fractionated by Superose 6 gel fi ltration chromatography. Eluate fractions were analyzed by immunoblotting using Fzo1-specifi c antibodies. (D) Fzo1 degradation upon α-factorinduced cell cycle arrest. Fzo1 stability in cell cycle-arrested wildtype and ∆mdm30 cells was analyzed as in A. The position of standard molecular mass markers during electrophoresis corresponding to 116, 43, and 27 kD are indicated by the small bars in panels showing Fzo1, Tom40, or Tpi1, respectively.
To examine whether Mdm30 interacts directly with Fzo1, we performed coimmunoprecipitation experiments using Fzo1specifi c antibodies in cells expressing Mdm30 or F-box variants thereof. Mdm30 was precipitated with Fzo1-specifi c antibodies, demonstrating complex formation of both proteins in wild-type cells (Fig. 2 C). Thus, in agreement with studies on other F-box proteins (Skowyra et al., 1997), Fzo1 recognition by Mdm30 does not depend on its F-box (Fig. 2 C). It should be noted that after solubization of mitochondrial membranes with digitonin, Mdm30 or mutant variants did not coelute with Fzo1 upon sizing chromatography, indicating a rather dynamic interaction (unpublished data).

Mdm30-mediated Fzo1 turnover is independent of the SCF complex or of ubiquitylation
Mdm30 was found associated with both Skp1 and Cdc53 in high throughput protein-protein interaction studies (Uetz et al., 2000) and in vitro (Kus et al., 2004). Its requirement for Fzo1 proteolysis therefore suggests that degradation occurs through ubiquitylation by SCF complexes (Petroski and Deshaies, 2005). Protein shut-off experiments were performed in cells defi cient for core components of SCF complexes (skp1-11, skp1-12, and cdc53-1) or for the E2 enzyme Cdc34 (cdc34-2). Fzo1 was degraded in these SCF-defi cient cells with kinetics similar to those of wildtype cells (Fig. 3 A). This was in contrast to Grr1, a known substrate of the SCF complex (Galan and Peter, 1999), which stably accumulated in these mutants (Fig. 3 B). We also analyzed the stability of Fzo1 in cells that allow tetracycline-sensitive expression of the essential genes CDC53 and CDC34 (Mnaimneh et al., 2004) but did not observe a stabilization of Fzo1 upon repression of CDC53 or CDC34 (unpublished data). Thus, Mdm30dependent proteolysis of Fzo1 does not require SCF ubiquitin ligase complexes. These fi ndings are reminiscent of the F-box proteins Ctf13 and Rcy1, which do not assemble in SCF complexes (Russell et al., 1999;Galan et al., 2001), and substantiate that F-box proteins may exert cellular functions other than ubiquitindependent protein degradation. It should be emphasized, however, that Mdm30 could mediate the degradation of other substrate proteins by interaction with SCF complexes. This hypothesis is supported by the recently observed Mdm30-dependent ubiquitylation of Gal4 in the nucleus (Muratani et al., 2005).
To directly examine a possible ubiquitylation of Fzo1 by other E3 ubiquitin ligases, cellular ubiquitin pools were limited either by using a mutant E1 enzyme (uba1 ts ) or through the overexpression of mutant ubiquitin forms, unable to form ubiquitin chains (K29R, K48R, K63R, or RRR). Neither approach caused a stabilization of Fzo1 (Fig. 3 C). We conclude that Mdm30-dependent constitutive Fzo1 degradation is independent of SCF and ubiquitin.
We also examined the role of ubiquitylation for Fzo1 proteolysis upon mating factor-induced cell cycle arrest in uba1 ts  and Grr1-myc was analyzed after inhibition of cytosolic protein synthesis with cycloheximide (CHX) in vegetatively growing wildtype (wt), ∆mdm30, cdc34-2, cdc53-1, skp1-11, skp1-12, and uba1 ts cells at 37°C, as described in Fig. 1 A. (D) Proteolysis of Fzo1 in the presence of α-factor was monitored at 37°C in wildtype and uba1 ts cells. The position of standard molecular mass markers during electrophoresis corresponding to 158 and 116 kD are indicated by the small bars in panels showing Grr1 or Fzo1, respectively. cells and found it to be impaired (Fig. 3 D). Thus, in striking contrast to its constitutive and Mdm30-dependent degradation, the proteolytic breakdown of Fzo1 in arrested cells is ubiquitin dependent (Fig. 3 D).

Proteasome independence and ATP dependence of Fzo1 degradation
We next examined the stability of Fzo1 in yeast cells with deficient proteasomal activity. Proteolysis of Fzo1 was not impaired in pre1-1 or cim5-1 cells carrying mutations in a proteolytic subunit of the 20S core particle or in an ATPase subunit of the 19S regulatory complex, respectively (Fig. 4 A). Similarly, deletion of the proteasomal assembly factor Ump1 did not interfere with the proteolytic breakdown of Fzo1 in vegetatively growing cells (Fig. 4 A). This is in contrast to Fzo1 proteolysis in cells arrested in the presence of mating factor (Fig. 4 B). In agreement with previous inhibitor studies (Neutzner and Youle, 2005), Fzo1 remained stable after treating pre1-1 or cim5-1 cells with α-factor (Fig. 4 B). We conclude that the constitutive Mdm30-dependent turnover of Fzo1 occurs independently of the 26S proteasome, whereas degradation of Fzo1 upon αfactor arrest involves ubiquitylation and 26S proteasomes.
To further characterize the Mdm30-mediated Fzo1 proteolysis, we examined a potential ATP dependence of this proteolytic pathway. Two chemical inhibitors of ATP production in mitochondria were used: NaN 3 , an inhibitor of the cytochrome c oxidase, and carbonylcyanide m-chlorophenylhydrazone (CCCP), an uncoupler dissipating the membrane potential across the mitochondrial inner membrane. Both treatments completely blocked degradation of Fzo1, which appears to be ATP dependent (Fig. 4 C).
We therefore analyzed the stability of Fzo1 in mitochondria lacking the ATP-dependent i-AAA protease subunit Yme1, which is active in the intermembrane space of mitochondria (Leonhard et al., 1996), but did not observe any effect on Fzo1 degradation (Fig. 4 A). Moreover, we examined the involvement of vacuolar degradation, which is responsible for the general removal of mitochondrial proteins under rapamycin-induced autophagic conditions (Kissova et al., 2004). However, Fzo1 was not stabilized in pep4 cells lacking active vacuolar peptidases (Fig. 4 A). We conclude that Fzo1 is constitutively degraded by a yet unknown proteolytic system whose activity is apparently ATP dependent.

Mdm30 controls mitochondrial fusion exclusively through Fzo1 proteolysis
Deletion of MDM30 impairs mitochondrial fusion and results in the formation of fragmented mitochondria accompanied by the accumulation of Fzo1 (Fig. 5 A; Fritz et al., 2003). To examine whether Fzo1 accumulation in ∆mdm30 cells is a general consequence of impaired mitochondrial fusion, the steady-state concentrations of Fzo1 were determined in ∆ugo1, ∆mgm1, and ∆pcp1 mutant cells. Fzo1 did not accumulate in either of these mutant cells, demonstrating that there is no direct link between the cellular level of Fzo1 and ongoing mitochondrial fusion (Fig. 5 B). To further substantiate the specifi c effect of Mdm30 on Fzo1 stability and mitochondrial fusion, we analyzed the effect on the steady-state level of Fzo1 of the 131 nonessential deletion strains and in the 16 tet-off essential genes known to have fragmented mitochondria (Dimmer et al., 2002;Altmann and Westermann, 2005). However, apart from ∆mdm30 cells, we did not observe altered Fzo1 levels (unpublished data). It therefore seems likely that Mdm30 affects mitochondrial dynamics by specifi cally regulating the stability of Fzo1.
To substantiate the specifi c effect of Mdm30 on Fzo1, we assessed mitochondrial morphology upon overexpression of Fzo1 in wild-type cells. Strikingly, mitochondria in cells overexpressing Fzo1 in the presence of an MDM30 wild-type allele resembled the fragmented mitochondria seen in ∆mdm30 cells (Fig. 5 A). In agreement with this observation, proteolysis of Fzo1 was only observed when Fzo1 was expressed from a centromeric low-copy plasmid but not when expressed from a multicopy plasmid (Fig. 5 C). These fi ndings were further supported by modulating Fzo1 expression in wild-type and ∆mdm30 cells using the inducible GAL1 promoter. Growing yeast cells in the presence of glucose, raffi nose, or galactose results in repression, nonrepression, or induction of Fzo1 synthesis. Importantly, tubular mitochondria were observed in ∆mdm30 cells grown under nonrepressed conditions in the presence of raffinose, i.e., at intermediate expression levels of Fzo1 (Fig. 5 D and Table I). This confi rms that mitochondrial morphology can be modulated by changing Fzo1 expression levels. Thus, mitochondrial fusion requires a tight control of the steady-state concentration of Fzo1. We conclude that lowering Fzo1 protein levels allows bypassing of Mdm30. Therefore, Mdm30 promotes mitochondrial fusion exclusively by controlling the steady-state level of Fzo1.
Overexpressing Fzo1 in wild-type cells prevents its degradation, suggesting that Mdm30 could be the limiting factor. The stability of Fzo1 was monitored in wild-type (wt), ∆mdm30, pre1-1, cim5-1, ∆ump1, ∆yme1, and ∆pep4 cells after addition of cycloheximide (CHX) as in Fig. 1 A. (B) Fzo1 stability upon α-factor-induced cell cycle arrest was examined in wild-type, pre1-1, and cim5-1 cells, which also lacked BAR1. (C) Exponentially growing wild-type cells were treated with cycloheximide (CHX) and additionally with sodium azide (NaN 3 ) or CCCP as indicated. The stability of Fzo1 was determined as in Fig. 1 A. The position of the standard molecular mass marker during electrophoresis corresponding to 116 kD is indicated by the small bars.
Therefore, Mdm30 was overexpressed in cells containing a galactose-inducible FZO1 allele. Surprisingly, we found that the simultaneous overexpression of Fzo1 and Mdm30 is deleterious for cellular growth and leads to abnormal cellular and mitochondrial morphologies (Fig. 5 E). It is therefore conceivable that the Fzo1-Mdm30 complex sequesters an as-yet-unknown factor that is essential for growth.

Conclusions
Our experiments demonstrate a crucial role of Fzo1 proteolysis for the maintenance of mitochondrial morphology. The stability of Fzo1 is controlled by a novel, apparently ATP-dependent proteolytic system. This system involves the F-box protein Mdm30 but not ubiquitylation and SCF complexes, opening new perspectives for cellular activities of F-box proteins. Our results also demonstrate that proteins in the outer membrane of mitochondria can be degraded in at least two ways, only one of which is dependent on the UPS. At the same time, they suggest a mechanism that regulates organellar morphology by the use of two different proteolytic systems during different physiological states of a eukaryotic cell.

Yeast strains and growth media
Yeast strains were grown according to standard procedures on complete or synthetic media supplemented with 2% (wt/vol) glucose or, when indicated, 2% (wt/vol) galactose or raffi nose and 0.02% (wt/vol) glucose. 100 μg/ml cycloheximide, 10 μM α-factor (or 0.1 μM in the case of ∆bar1 cells), 2 mM NaN 3 , or 1 mM CCCP was added when indicated. The cell cycle arrest in the presence of α-factor was verifi ed microscopically.
Yeast strains used were derivatives of W303 and BY4741. The strains ∆mdm30, ∆fzo1, ∆ugo1, ∆pcp1, or ∆mgm1 and the isogenic wildtype strain BY4741 were obtained from Euroscarf. For expression of Fzo1 in wild-type and ∆mdm30 cells under the control of the GAL1 promoter, previously described strains were used (Fritz et al., 2003). MDM30 and PEP4 were deleted by PCR-based homologous recombination in W303. Figure 5. Control of mitochondrial fusion by Mdm30dependent proteolysis of Fzo1. (A) Cellular (Nomarski) and mitochondrial (GFP) morphology was visualized by fl uorescence microscopy after expressing mtGFP in wild-type (wt), ∆fzo1, and ∆mdm30 cells or in wild-type cells expressing Fzo1 from a multicopy plasmid under the control of the CUP1 promoter in the presence of added copper (50 μM; wt + Fzo1 2μ ). (B) Steady-state concentrations of Fzo1 in extracts of the indicated strains were analyzed by immunoblotting using Fzo1specifi c and, as a loading control, Tom40-specifi c antibodies. (C) Stability of Fzo1 present at different levels in wild-type and ∆mdm30 cells. Protein synthesis shut-off experiments were performed as in Fig. 1 A using exponentially growing wildtype or ∆mdm30 cells expressing HA-Fzo1 from either a centromeric (cen) or a multicopy (2μ) plasmid under the control of the endogenous FZO1 promoter. (D) Wild-type and ∆mdm30 cells expressing mtGFP and harboring a chromosomal integration of the GAL1 promoter upstream of the FZO1 coding region were grown on glucose-, raffi nose-, or galactose-containing medium. Cellular (Nomarski) and mitochondrial (GFP) morphology was visualized after expression of mtGFP by fl uorescence microscopy. (E) Wild-type cells expressing mtGFP and harboring a chromosomal integration of the GAL1 promoter upstream of the FZO1 coding region were grown on glucose-or galactose-containing medium. Cells were expressing MDM30 from a multicopy plasmid under the control of the CUP1 promoter when indicated. Cellular (Nomarski) and mitochondrial (GFP) morphology was visualized by fl uorescence microscopy. The position of standard molecular mass markers during electrophoresis corresponding to 116 and 43 kD are indicated by the small bars in panels showing Fzo1 or Tom40, respectively. Bars, 5 μm. Wild-type (wt) and ∆mdm30 strains expressing mtGFP and harboring a chromosomal integration of the GAL1 promoter upstream of the FZO1 coding region were grown on glucose, raffi nose, or galactose, and mitochondrial morphology of ‫001ف‬ cells was classifi ed as fragmented, aggregated, or tubular. Bold numbers indicate the most represented class on each condition tested. Notably, mitochondrial tubules observed in ∆mdm30 cells were usually shorter and clearly distinct from the tubular morphology of wild-type cells.
To increase the effi ciency of the α-factor arrest, BAR1 was deleted by PCRbased homologous recombination in wild-type, cim5-1, and pre1-1 cells.

Protein synthesis shut off and -factor cell cycle arrest
To monitor constitutive proteolysis of Fzo1, cycloheximide was added to logarithmically growing yeast cultures at a fi nal concentration of 100 μg/ml. Thermosensitive strains were incubated for 1 h at 37°C before adding cycloheximide. To examine Fzo1 degradation upon α-factor-induced cell cycle arrest, early log phase cells grown on YPD were treated with 20 mM sodium citrate and 10 μM α-factor (or 0.1 μM in ∆bar1 strains). At the indicated time points, cells corresponding to 3 OD units were collected and lysed at alkaline pH (Tatsuta and Langer, 2006), and protein extracts were analyzed by SDS-PAGE and immunoblotting. Mean values of at least three independent experiments are shown.

Coimmunoprecipitation of Fzo1 and Mdm30
Wild-type cells expressing Mdm30 and variants thereof from a copperresponsive promoter were grown on synthetic media without an additional copper supplement. Crude mitochondria obtained from 60 OD units of these cells were solubilized for 15 min in 1% (wt/vol) digitonin in immunoprecipitation buffer (150 mM KAc, 4 mM MgAc, 30 mM Tris/HCl, pH 7.4, 1 mM PMSF, and 1 mM ATP). After a clarifying spin for 15 min at 45,000 g, supernatants were incubated for 1 h at 4°C under constant mixing with protein A-Sepharose and polyclonal antibodies against the GTPase domain of Fzo1. After two washing steps in immunoprecipitation buffer and one washing step in 10 mM Tris/HCl, pH 7.4, bound material was eluted with SDS sample buffer and used for Western blot analysis.

Microscopy
Overnight cultures were analyzed by epifl uorescence microscopy on a microscope (Axioplan; Carl Zeiss MicroImaging, Inc.) using a 100× oilimmersion objective. GFP fl uorescence was visualized in living cells. Images were acquired with a camera (Quantix; Photometrix) and processed with MetaMorph 4.5 software (Universal Imaging Corp.).