the cdna microarray method has been developed recently and has been successfully applied to genomewide analysis of gene expression stimulated by hormones and/or chemicals ( inoue and pennie 2002 ; watanabe and iguchi 2003 ) . knowledge of the patterns in the expression of estrogen - responsive genes is essential to understanding the action mechanism of estrogenic chemicals on mouse reproductive organs . a large number of genes affected by estrogen were selected from the mouse ( moggs et al . 2002a , 2002b , 2003a ) and rat uterus ( daston and naciff 2005 ) . for most of the selected genes , their expression was not altered following e2 treatment in er- knockout mice , thus confirming the dependency of these genes on er-. activation of these genes suggests a basis for the marked uterotrophic effect observed several days following estrogen administration . characteristic gene expression patterns were observed for each environmental estrogenic chemical , and these patterns were distinct from that of e2 , thereby suggesting specific mechanisms of action for endocrine disruption that could be different from that induced by endogenous estrogen ( daston and naciff 2005 ; watanabe et al . 2004a ) . physiological estrogens ( e2 ) , nonphysiological estrogens ( des ) , and dioxin have distinct effects on uterine gene expression ( watanabe et al . 2003b , 2004b ) . in the liver , however , np and dioxin activated another set of genes that were distinct from estrogen - responsive genes ( watanabe et al . thus , these results suggest that only a small number of genes are directly involved in the uterotrophic effects of estrogen treatment , and np has effects very similar to those of e2 on gene expression in uterus but not in hepatic tissue . tissue - specific effects , therefore , should be considered in order to elucidate the distinct effects of various edcs . extensive studies on contaminant - exposed and reference populations of american alligator ( alligator mississippiensis ) have revealed altered steroidogenesis , abnormal circulating hormone levels , hepatic transformation of androgen and endocrine organ morphology in juvenile alligators living in polluted environments , and a number of contaminants in eggs , serum , and body tissues ( guillette and iguchi 2003 ) . affinity of some compounds is relatively high for alligator ers , and many compounds can displace e2 from the er ( guillette et al . 2002 ) in all species of crocodilians , sex is determined not by a genetic mechanism alone but also by the temperature at which the egg is incubated . in the alligator , the thermosensitive period ( tsp ) for sex determination is the 7- to 10-day window within stages 2124 of development ( lang and andrews 1994 ) . treating embryos with estrogen during the tsp produces female offspring even at male incubation temperatures . . however , the mechanisms of estrogen action on sex determination in the alligator are still uncertain . furthermore , studies of contaminant - exposed alligators have shown alterations in steroid action ( guillette and iguchi 2003 ; guillette et al . 1994 ) . whether these abnormalities are caused , in part , by alterations in steroid receptor expression the cdna encoding the ers and the progesterone receptors ( pr ) was isolated ( katsu et al . 2004 ) . the er- amino acid sequence is similar to that of chicken er- ( 91% ) . the er- sequence of the nile crocodile is quite similar to that of the american alligator . the turtle er- sequence is closer to that of alligators than to that of the chicken ( katsu et al . several thousand expressed sequence tags ( ests ) from the cdna library of adult alligators and those of the gonads of embryos incubated at temperatures that produce all males or all females have been sequenced and clustered . we are currently establishing an alligator microarray for the study of the molecular mechanism of sex determination and of the chemical effects on sex determination and the toxic effects of chemicals . exogenous chemicals that can interfere with the thyroid hormone axis could pose a significant hazard to human and wildlife health ( colborn 2002 ; zoeller 2003 ) . amphibians represent a suitable model for monitoring reproductive performance , advanced development including metamorphosis , and sexual maturation ( kloas 2002 ) . the influence of np , bpa , and e2 on developing xenopus laevis embryos was analyzed . embryos were exposed to these agents between 3 and 96 hr postfertilization ( p.f . ) . short body length , microcephaly , flexure , edema , and abnormal gut coiling were induced by 4.4 mg / l np or bpa or by 2.7 mg / l e2 at 96 hr p.f . interestingly , the stages of embryos sensitive to bpa and np were different ; bpa affected earlier stages , whereas np affected later stages ( sone et al . bpa interferes with the assembly of microtubules ( metzler and pfeiffer 1995 ) and causes mitotic arrest and aberrant spindles ( ochi 1999 ) . these bpa actions may affect the susceptibility of embryos , especially at the earliest stages . insensitivity of x. laevis embryos to bpa after 12 hr p.f . may reflect the weak in vitro activity of bpa relative to np or e2 ( nishikawa et al . transcriptional levels of aromatase and er genes increased from stage 56 in x. laevis ( miyashita et al . 2000 ) , although er mrna was detected at stage 8 ( nishimura et al . 1997 ) . considering the ability of estrogen treatment to induce ectopic expression of the er ligand  binding domain of fused mrna ( kolm and sive 1995 ) , it is possible that genes under the regulation of the estrogen  er pathway are inactive at the developmental stages tested but are capable of transcriptional activation in the presence of an exogenous ligand . to establish a model system for studying the effects of edcs on marine fish , we examined the effects of e2 on the early development of fundulus heteroclitus . e2 ( 2.72 g / l ) reduced hatching and survival rates , and induced malformations with incomplete ossification of bones and 100% females ( urushitani et al . 2002 ) . to clarify the mechanisms contributing to these developmental effects of exogenous estrogen , we cloned fundulus er- ( fher- ) , which shared 81% identity with medaka ( oryzias latipes ) er- . a receptor binding assay using the fher- ligand - binding domain showed that alkylphenols bind to fher- 50 times more efficiently than to human er- ( urushitani et al . we characterized the estrogenicity of 4-methylbenzylidene , camphor , octylmethoxycinnamate , and propyl paraben ( n - propyl - p - hydroxybenzoate ) using medaka vitellogenin ( vtg ) plasma concentration , vtg , and choriogenin mrna expressions ( inui et al . we are currently establishing a medaka microarray containing known genes related to steroidogenesis , sex development , degradation of chemicals , and estrogen - responsive genes . the occurrence of intersexuality has been reported in wild roach ( rutilus rutilus ) ( jobling et al . 1998 ) , gudgeon ( gobio gobio ) ( van aerle et al . 2001 ) , and flounder ( platichthys flesus ) ( allen et al . 1999 ) in the united kingdom and in flounder ( pleuronectes yokohamae ) in japan ( hashimoto et al . endocrine disruption of roach is thought to be caused by estrogenic agents in sewage effluents . in intersex roach , sexual maturation , 2002a , 2002b ) . to understand the molecular mechanisms of intersex in roach that are induced by substances in sewage effluents , we have cloned genes of er- , er- , ( androgen receptor ( ar ) , pr , aromatase brain type , aromatase gonad type , dmrt-1 , and other genes related to steroidogenesis . we are now establishing a roach microarray system . a number of studies have documented endocrine disruption derived from estrogenic responses caused by exposure to pesticides ( wester 1991 ) , surfactants ( white et al . induction of secondary sex characteristics such as malelike coloration in female guppy ( poecilia reticulata ) , development of malelike gonopodium , and altered reproductive behavior in female mosquitofish ( gambusia affinisi ) have been reported following exposure to pulp mill effluent ( drysdale and bortone 1989 ; howell et al . these data indicate the existence of contaminants with androgenic activity , which mimic or block endogenous androgen by interacting with the receptor in the aquatic organisms ( durhan et al . however , compared with our knowledge of estrogenic environmental chemicals , the substances and mechanisms of androgenic action remain unclear ( gray et al . recent studies with wild fathead minnows ( pimephales promelas ) have suggested the presence of potent androgenic substances in feedlot effluent ( orlando et al . together with other wastewater contaminants , feedlot effluent has become a major ecological health concern . trenbolone acetate , an androgenic and anabolic steroid , is a potent agonist of ar , and it has been used extensively as a growth promoter for beef cattle in the united states . we have cloned mosquitofish ( gambusia affinis affinis ) ar- and ar- , and studied the effects of 17-trenbolone ( tb ) , a hydoxylated active compound of trenbolone acetate , on adult and newborn mosquitofish . tb induced masculinization of the anal fin , accompanied by a transient up - regulation of ar- and ar- in adult females . tb also induced differentiation of the anal fin into the gonopodium in fry at 0.310 g / l and stimulated precocious spermatogenesis in males and the formation of ovotestis in females at 110 g / l ( sone et al . small freshwater fish used widely for toxicology research include the japanese medaka , the fathead minnow , and the zebrafish . to date , very little has been done to apply genomics technologies to ecological risk assessment of aquatic species such as fish . current genome sequencing efforts for several fish models such as zebrafish , medaka , and fathead minnow make these fish potential candidates for large - scale efforts to incorporate genomics technologies in an effort to understand the mechanistic toxicity pathways for environmental stressors ( miracle and ankley 2005 ) . in addition , genome sequencings are under way in other species such as european flounder , sheepshead minnow ( cyprinodon variegates ) , large mouth bass ( micropterus salmoides ) , rainbow trout ( onchorhynchus mykis ) , and the three - spined stickleback ( gusterosteus aculeatus aculeatus ) . therefore , it is likely that the dynamic picture of various biological systems will be understood in the near future . in contrast to the relatively large effort to examine the estrogenic / antiestrogenic and androgenic / antiandrogenic action of various environmental chemicals in vertebrates , there has been relatively little research on the tremendous array of invertebrates that inhabit fresh and marine water environments . detailed information concerning the effects and mechanisms of action of industrial chemicals in invertebrates has been obtained from only a few invertebrate species , although invertebrates represent more than 95% of the known species in the animal kingdom ( defur et al . the masculinizing effects , known as imposex and characterized by development of a vas deferens and a penis in females , of organotin compounds , such as tributyltin ( tbt ) , on snails have been found in about 150 species of mollusks ( gibbs and bryan 1986 ; horiguchi et al . the mechanism by which tbt induces imposex in marine snails is still unknown , although tbt has been shown to inhibit aromatase activity ( bettin et al . pg / l , an environmentally relevant concentration , for 4 weeks induced imposex in rockshells ( thais clavigera ) ; however , injection of the aromatase inhibitor , fadrozole , alone or in combination with testosterone ( t ) did not induce imposex ( horiguchi t , katsu y , ohta y , iguchi t , unpublished data ) . aromatization of [ h]-t to [ h]-e2 was encountered in the rockshell gonad extract ( katsu y , horiguchi t , iguchi t , unpublished data ) . these results suggest that neither inhibition of aromatase by tbt nor androgen action by tbt is the principal cause of imposex in rockshells . cells trans - fected with a rockshell er - like sequence showed ligand - independent reporter gene activation ( katsu y , horiguchi t , iguchi t , unpublished data ) , which suggests that the rockshell er - like sequence has a specific unknown function in the rockshell , but it is unlikely that it acts like vertebrate er . in the freshwater snail , marisa cornuarietis , bpa and octylphenol ( op ) at concentrations as low as 1 g / l induced development of an additional vagina , enlargement of the accessory pallial sex glands , and enhancement of oocyte production . in the marine prosobranch , nucella lapillus , the same concentrations of bpa and op reduced the length of the penis and the size of the prostate gland ( oehlmann et al . such results suggest that these snails have a functional er and , thus , that estrogenic chemicals could have a negative impact on these snails . rxr , one of the nuclear receptors , from humans and from xenopus has been activated by tbt in reporter gene assay systems ( grun f , watanabe h , zamanian z , maeda l , arima k , chubacha r , et al . , unpublished data ) . tbt and 9-cis retinoic acid have been shown to activate the rockshell rxr , and 9-cis retinoic acid has been shown to induce imposex in the rockshell ( nishikawa et al . these results suggest that future research to examine the mechanism of action of edcs in invertebrates needs to focus on other nuclear hormone receptors distinct from the er and the ar . reproductive , acute , or chronic toxicity tests on daphnids have been used widely for aquatic toxicology . conflicting results on the molting frequency of daphnia magna following exposure to estrogenic chemicals have been reported ( caspers 1998 ) . a xenoestrogen - induced reduction in the molting frequency of d. magna ( niederlehner et al . 1998 ; zou and fingerman 1997 ) could not be confirmed for bpa ( tatarazako et al . we found that styrene dimers and trimers , leached from disposable polystyrene cups , reduced the number of offspring in ceriodaphnia dubia . styrenes ( 0.041.7 g / l ) , ecdysones ( 0.11.08 g / l ) , and juvenile hormone agonists ( 1.05 g / l ) reduced fertility , whereas e2 and bpa had no effect on the reproduction of c. dubia . np ( 280 g / l ) influenced daphnids via membrane damage ( tatarazako et al . we have cloned a full - length sequence of an ecdysone receptor from d. magna and established an ecdysone reporter gene assay ( watanabe et al . we and others have revealed that exposure of adult daphnids to juvenile hormones and their analogs induces parthenogenetically reproducing d. magna to produce male neonates ( olmstead and leblanc 2002 , 2003 ; tatarazako et al . 2003 ) . ten juvenoids [ pyriproxyfen , fenoxycarb , methylfarnesoate , juvenile hormone i ( jh i ) , jh ii , jh iii , methoprene , kinoprene , hydroprene , and epofenonane ] have induced male neonate production ( oda et al . in addition , daphnids are susceptible to the male sex  determining effect of juvenoids during early oogenesis ( olmstead and leblanc 2002 ; tatarazako et al . although there was a wide range of sensitivity to fenoxycarb ( 0.69.3 g / l ) , the production of male neonates in all four species ( moina macrocopa , moina micrura , c. dubia , and c. reticulata ) demonstrates that this phenomenon is a common response to juvenoids ( oda et al . these findings suggest that juvenile hormone agonists , including some insecticides , affect the chemical signaling responsible for inducing the production of male offspring . we constructed a cdna library of d. magna and characterized the ests of over 7,000 clones ( watanabe et al . 2005 ) . to understand the molecular functional mechanism of juvenile hormone agonists in the induction of male offspring , we are currently analyzing juvenile hormone binding protein and establishing a micoroarray system for d. magna . much of the literature to date on the edc issue focuses on steroid hormone receptor  mediated toxicity . therefore , information on gene and protein expression mediated by hormone receptors is essential for understanding chemical effects . species differences with respect to the interaction of various chemicals with ers and with regard to the metabolism of chemicals have been observed . therefore , we are currently cloning receptors of various steroid hormones , and steroid and xenobiotic receptors ( sxr ) , from various animal species , including alligator , quail , and various fish species , in order to find species that are sensitive to edcs . we are also focusing on orphan nuclear receptors that may provide new insights into the mechanisms of chemical action , as shown with rxr activation by tbt in gastropods and even in xenopus and mice . analyses of transgenerational effects of xenobiotic agents are also required in order to estimate and confront potential dangers to human and wildlife populations . there are also species differences in the response of er and sxr to chemicals , in degradation of chemicals , in critical sensitive windows , and in development . to clarify the adverse effects of chemicals , we need to understand the timing of gene expression ( critical developmental window ) , the amount of gene expression ( amount of chemicals ) in specific organs , the degradation ability of chemicals , and the normal range of various biomarkers in each species . by the application of omic technologies ( genomics , transcriptomics , proteomics , and metabolomics ) in the study of edcs , we will understand the detailed mechanisms of action of chemicals in the future . in this review , we have focused primarily on receptor - mediated gene expression ; however , it is critical to broaden the spectrum of hormonal disruption in the hypo - thalamic  pituitary  end gland axes , and to include the ability of animals to cope with stress or chemical communication ( propper 2005 ) . further basic biological understanding of comparative molecular endocrinology , genomics , and toxicology in animal species is essential in order to be able to apply omics technologies to the study of wildlife species .