File size: 18,200 Bytes
7cfe403 |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 |
Paper identifier,Protocols,Organisms,Published?,Median QC score,ATAC-seq,RNA-seq,ChIP-seq,3D seq,Other seq
Aeby2020decapping,PRO-seq,M. musculus,Yes,1,No,Yes,No,No,No
Agarwal2021kdm1a,"other, GRO-seq",M. musculus,Yes,1,No,Yes,Yes,No,No
Aho2019displacement,PRO-seq,H. sapiens,Yes,1,No,Yes,Yes,No,No
Akulenko2018transcriptional,GRO-seq,D. melanogaster,Yes,3,No,No,No,No,Yes
Alexander2019imprinted,PRO-seq,M. musculus,No,2,No,No,No,No,No
Alhusini2017genomewide,GRO-seq,S. cerevisiae,Yes,4.5,No,No,No,No,No
Allen2014global,GRO-seq,H. sapiens,Yes,3,No,No,No,No,Yes
Anderson2020defining,PRO-seq,M. musculus,Yes,3,No,No,No,No,No
Andersson2014nuclear,GRO-seq,H. sapiens,Yes,1,No,No,No,No,Yes
Andrade2015dna,other,H. sapiens,Yes,2.5,No,No,No,No,No
Andrysik2017identification,GRO-seq,H. sapiens,Yes,1,No,Yes,Yes,No,Yes
Aoi2020nelf,"PRO-seq, PRO-cap",H. sapiens,Yes,2,No,No,Yes,No,No
Aprile-garcia2019nascent,PRO-seq,H. sapiens,Yes,2.5,No,No,Yes,No,No
Ba2020ctcf,GRO-seq,M. musculus,Yes,1,No,No,Yes,Yes,Yes
Bahat2019targeting,GRO-seq,H. sapiens,Yes,2,No,Yes,No,No,Yes
Barbieri2020rapid,other,H. sapiens,Yes,4,No,Yes,No,No,No
Barucci2020small,PRO-seq,C. elegans,Yes,3,No,Yes,No,No,Yes
Beckedorff2020human,PRO-seq,H. sapiens,Yes,1,Yes,Yes,Yes,No,Yes
Bi2020enhancer,GRO-seq,H. sapiens,Yes,2,Yes,Yes,Yes,No,No
Birkenheuer2018herpes,GRO-seq,H. sapiens,Yes,1,No,Yes,No,No,No
Birkenheuer2020rna,PRO-seq,H. sapiens,Yes,1,No,No,No,No,No
Blumberg2021characterizing,PRO-seq,H. sapiens,Yes,1,No,Yes,No,No,No
Boija2017cbp,PRO-seq,D. melanogaster,Yes,3.5,No,No,Yes,No,Yes
Bonelt2019precocious,GRO-seq,M. musculus,Yes,2,Yes,Yes,Yes,No,No
Booth2016divergence,"PRO-cap, PRO-seq","S. cerevisiae, S. pombe",Yes,4,No,Yes,No,No,No
Booth2018cdk9,PRO-seq,S. pombe,Yes,4,No,No,No,No,No
Bouvyliivrand2017analysis,GRO-seq,H. sapiens,Yes,2,No,No,No,No,No
Boxer2020mecp2,PRO-seq,M. musculus,Yes,2,No,Yes,Yes,Yes,Yes
Busslinger2017cohesin,GRO-seq,M. musculus,Yes,4,No,Yes,Yes,No,No
Cardamone2018mitochondrial,GRO-seq,M. musculus,Yes,3.5,No,Yes,Yes,No,No
Cecere2013zfp1,GRO-seq,C. elegans,Yes,4,No,No,No,No,No
Cecere2014global,GRO-seq,C. elegans,Yes,4,No,No,No,No,No
Chen2014gene,GRO-seq,H. sapiens,Yes,3,No,No,Yes,No,No
Chen2015paf1,"other, GRO-seq",H. sapiens,Yes,2,No,Yes,Yes,No,No
Chen2016cutoff,GRO-seq,D. melanogaster,Yes,5,No,Yes,Yes,No,No
Chen2017rchip,GRO-seq,H. sapiens,Yes,4,No,No,Yes,No,No
Chen2018augmented,GRO-seq,H. sapiens,Yes,3,No,No,Yes,No,No
Chen2018rna,GRO-seq,M. musculus,Yes,4.5,No,No,No,No,Yes
Chivu2020unpublished,ChRO-seq,"H. sapiens, E. caballus",No,0,Yes,No,Yes,No,Yes
Chu2018chromatin,"ChRO-seq, other, PRO-seq",H. sapiens,Yes,1,No,No,No,No,No
Compagno2017phosphatidylinositol,GRO-seq,M. musculus,Yes,1.5,No,No,No,No,Yes
Core2008nascent,GRO-seq,H. sapiens,Yes,4,No,No,No,No,No
Core2012defining,GRO-seq,D. melanogaster,Yes,3,No,No,Yes,No,No
Core2014analysis,"GRO-cap, GRO-seq, PRO-seq",H. sapiens,Yes,3.5,No,No,No,No,No
Cosby2021recurrent,PRO-seq,M. velifer,Yes,4,No,No,Yes,No,No
Cuartero2020control,GRO-seq,M. musculus,Yes,3,Yes,Yes,Yes,Yes,No
Czimmerer2018transcription,GRO-seq,M. musculus,Yes,4,Yes,Yes,Yes,No,No
Dai2020loop,GRO-seq,M. musculus,Yes,1,No,No,Yes,Yes,Yes
Daniel2018nuclear,GRO-seq,M. musculus,Yes,3,Yes,Yes,Yes,No,No
Danko2013signaling,GRO-seq,H. sapiens,Yes,2,No,No,No,No,No
Danko2015identification,PRO-seq,H. sapiens,Yes,3,No,No,No,No,No
Danko2018dynamic,PRO-seq,"H. sapiens, M. mulatta, M. musculus, P. troglodytes, R. norvegicus",Yes,3,No,No,No,No,No
Delgado-benito2018chromatin,GRO-seq,M. musculus,Yes,3,No,Yes,Yes,No,No
Dorighi2017mll3,GRO-seq,M. musculus,Yes,4,Yes,Yes,Yes,No,Yes
Douillet2020uncoupling,PRO-seq,M. musculus,Yes,1,No,Yes,Yes,No,Yes
Duarte2016transcription,PRO-seq,D. melanogaster,Yes,3,No,Yes,No,No,No
Dukler2017nascent,PRO-seq,H. sapiens,Yes,1,No,No,No,No,No
Duttke2015human,"GRO-seq, GRO-cap",H. sapiens,Yes,4,No,No,No,No,No
Duttke2017unpublished,"GRO-seq, GRO-cap",D. melanogaster,No,3.5,No,No,No,No,No
Elkon2015myc,GRO-seq,H. sapiens,Yes,3,No,Yes,No,No,Yes
Elrod2019integrator,PRO-seq,D. melanogaster,Yes,3,Yes,Yes,Yes,No,No
Emmett2017histone,GRO-seq,M. musculus,Yes,3,No,Yes,Yes,No,No
Engreitz2016local,PRO-seq,M. musculus,Yes,2,Yes,Yes,Yes,No,No
Erhard2015nascent,GRO-seq,Z. mays,Yes,2,No,No,No,No,No
Escoubet-lozach2011mechanisms,GRO-seq,M. musculus,Yes,4,No,Yes,Yes,No,No
Esousa2019kinetics,PRO-seq,M. musculus,Yes,1,No,Yes,No,No,No
Estaras2015smad,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
Etchegaray2019histone,PRO-seq,M. musculus,Yes,1,No,No,Yes,No,Yes
Fan2020drb,"PRO-seq, other",H. sapiens,Yes,1,No,Yes,Yes,No,Yes
Fang2014circadian,GRO-seq,M. musculus,Yes,1.5,No,No,Yes,No,Yes
Fant2020tfiid,PRO-seq,"D. melanogaster, H. sapiens",Yes,3.5,No,No,No,No,No
Fei2018ndf,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,No
Fleischer2017dna,GRO-seq,H. sapiens,Yes,3.5,No,No,No,No,Yes
Flynn20167skbaf,GRO-seq,M. musculus,Yes,2,Yes,No,Yes,No,Yes
Fong2014pre,GRO-seq,H. sapiens,Yes,5,No,Yes,No,No,No
Fong2017rna,NET-seq,H. sapiens,Yes,2.5,No,No,Yes,No,No
Fonseca2019diverse,GRO-seq,M. musculus,Yes,3.5,No,Yes,Yes,No,No
Franco2015tnfalpha,GRO-seq,H. sapiens,Yes,1,No,No,Yes,No,No
Franco2018enhancer,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,No
Fuda2012fcp1,GRO-seq,D. melanogaster,Yes,4.5,No,No,No,No,No
Fuda2015gaga,GRO-seq,D. melanogaster,Yes,5,No,No,Yes,No,Yes
Galbraith2013hif1a,GRO-seq,H. sapiens,Yes,4,No,No,Yes,No,Yes
Gally2020gain,PRO-seq,H. sapiens,Yes,2,Yes,No,No,No,Yes
Gao2017thyroid,GRO-seq,H. sapiens,Yes,4,No,Yes,Yes,No,No
Gao2018jmjd6,GRO-seq,H. sapiens,Yes,3,No,Yes,Yes,No,No
Gardini2014integrator,GRO-seq,H. sapiens,Yes,3,No,Yes,Yes,No,No
Gibson2016chemical,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,Yes
Godfrey2017mll,other,H. sapiens,Yes,1,No,No,Yes,Yes,No
Guan2018diet,GRO-seq,M. musculus,Yes,4,No,No,Yes,No,No
Hah2011rapid,GRO-seq,H. sapiens,Yes,3,No,No,No,No,No
Hah2013enhancer,GRO-seq,H. sapiens,Yes,2,No,No,No,No,No
Hah2015inflammation,GRO-seq,M. musculus,Yes,1.5,No,No,No,No,No
Harman2021invivo,GRO-seq,M. musculus,Yes,1.5,Yes,Yes,No,Yes,No
Heinaniemi2016transcription,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
Heinz2013effect,GRO-seq,M. musculus,Yes,2,No,No,Yes,No,Yes
Herold2019recruitment,GRO-seq,H. sapiens,Yes,4,No,Yes,Yes,No,Yes
Hetzel2016nascent,"GRO-seq, GRO-cap",A. thaliana,Yes,3,No,Yes,No,No,No
Hong2017dissociation,GRO-seq,M. musculus,Yes,1.5,No,Yes,Yes,No,No
Horibata2018erpositive,PRO-seq,H. sapiens,Yes,1,No,No,No,No,No
Hou2019paf1c,PRO-seq,M. musculus,Yes,1,Yes,Yes,Yes,No,Yes
Hu2012dicer,GRO-seq,H. sapiens,Yes,2.5,No,Yes,Yes,No,Yes
Huang2020integrator,PRO-seq,D. melanogaster,Yes,3,No,Yes,Yes,No,No
Ikegami2020phosphorylated,GRO-seq,H. sapiens,Yes,1,Yes,Yes,Yes,No,No
Illingworth2016polycomb,GRO-seq,M. musculus,Yes,3.5,No,No,Yes,No,Yes
Incarnato2017vivo,other,E. coli,Yes,4,No,Yes,No,No,Yes
Jaeger2020selective,"PRO-seq, other",H. sapiens,Yes,1,No,Yes,Yes,Yes,Yes
Jager2016nuclear,GRO-seq,M. musculus,Yes,2,No,No,Yes,No,Yes
Ji2011transcriptional,GRO-seq,M. musculus,Yes,2,No,No,No,No,No
Ji2013sr,GRO-seq,M. musculus,Yes,4,No,No,Yes,No,No
Jiang2018multi,GRO-seq,H. sapiens,Yes,1.5,No,Yes,No,No,Yes
Jin2013high,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,Yes,No
Jin2014chem,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,No
Johnson2017biotin,GRO-seq,M. musculus,Yes,2,No,Yes,No,No,No
Johnston2020nascent,PRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,Yes
Jones2023unpublished,PRO-seq,H. sapiens,No,3,No,No,No,No,No
Jonkers2014genome,GRO-seq,M. musculus,Yes,2,No,No,No,No,No
Judd2020unpublished,"other, PRO-seq",H. sapiens,No,3.5,No,No,No,No,No
Judd2021pioneer,PRO-seq,D. melanogaster,Yes,3,Yes,Yes,Yes,No,Yes
Kaikkonen2013remodeling,GRO-seq,M. musculus,Yes,3,No,No,Yes,No,No
Kaikkonen2014control,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,Yes,No
Kaikkonen2017genome,GRO-seq,S. scrofa,Yes,4,No,No,No,No,No
Kantidakis2016mutation,GRO-seq,M. musculus,Yes,1,No,No,Yes,No,No
Kelly2020unpublished,PRO-seq,M. musculus,No,2,No,No,No,No,Yes
Khodor2011nascent,other,D. melanogaster,Yes,3,No,Yes,No,No,No
Kim2018pluripotency,PRO-cap,M. musculus,Yes,4.5,Yes,Yes,Yes,No,Yes
Kloetgen2020three,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,Yes,Yes
Komarov2020epigenetic,GRO-seq,D. melanogaster,Yes,3,No,Yes,No,No,No
Korkmaz2019crispr,GRO-seq,H. sapiens,Yes,1,No,Yes,Yes,No,No
Kourtis2018oncogenic,GRO-seq,H. sapiens,Yes,3,No,Yes,Yes,No,Yes
Kriaucionis2019unpublished,"PRO-seq, PRO-cap",H. sapiens,No,2,No,Yes,No,No,Yes
Kristjansdottir2020population,"PRO-seq, PRO-cap",H. sapiens,Yes,4,No,No,No,No,No
Kruesi2013condensin,"GRO-seq, GRO-cap",C. elegans,Yes,3.5,No,No,Yes,No,No
Kuosmanen2018nrf2,GRO-seq,H. sapiens,Yes,2.5,No,Yes,No,No,Yes
Kwak2013precise,"PRO-seq, PRO-cap",D. melanogaster,Yes,4,No,No,No,No,No
Kwon2017locus,GRO-seq,M. musculus,Yes,3,No,Yes,Yes,No,No
Lai2020directed,PRO-seq,M. musculus,Yes,1,No,Yes,No,No,No
Laitem2015cdk9,GRO-seq,H. sapiens,Yes,3,No,No,No,No,No
Lam2013rev,"GRO-cap, GRO-seq",M. musculus,Yes,3.5,No,No,Yes,No,No
Larschan2011x,GRO-seq,D. melanogaster,Yes,3,No,No,No,No,No
Le2013mapping,GRO-seq,H. sapiens,Yes,3,No,No,Yes,No,No
Leroy2019ledgf,PRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,No
Leveille2015genome,GRO-seq,H. sapiens,Yes,3,No,Yes,Yes,Yes,Yes
Li2013functional,GRO-seq,H. sapiens,Yes,1,No,No,Yes,No,Yes
Li2013ncor,GRO-seq,M. musculus,Yes,5,No,No,Yes,No,No
Li2015condensin,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
Li2017grid,GRO-seq,H. sapiens,Yes,4,No,No,No,No,Yes
Li2018lncrna,GRO-seq,H. sapiens,Yes,3,No,Yes,No,No,Yes
Li2020human,PRO-seq,H. sapiens,Yes,3,No,No,No,No,No
Li2020signalosome,PRO-seq,R. norvegicus,Yes,4,No,No,Yes,No,No
Li2021comprehensive,GRO-seq,H. sapiens,Yes,1.5,No,Yes,No,No,No
Liang2018targeting,PRO-seq,H. sapiens,Yes,1,No,Yes,Yes,No,Yes
Lin2012global,GRO-seq,M. musculus,Yes,2.5,No,No,Yes,Yes,No
Link2018analysis,"GRO-seq, GRO-cap",M. musculus,Yes,3,Yes,Yes,Yes,Yes,Yes
Linnakuosmanen2020nrf2,GRO-seq,H. sapiens,Yes,2,No,Yes,No,No,Yes
Liu2013brd4,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
Liu2014enhancer,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
Liu2017dynamic,GRO-seq,H. sapiens,Yes,3,No,No,No,No,No
Liu2017identification,PRO-seq,H. sapiens,Yes,2,No,No,No,No,No
Liu2017transcriptional,GRO-seq,H. sapiens,Yes,1,No,Yes,Yes,No,Yes
Liu2018arabidopsis,GRO-seq,A. thaliana,Yes,4,No,Yes,Yes,No,No
Liu2018rna-directed,GRO-seq,A. thaliana,Yes,2,No,Yes,Yes,No,No
Liu2020immediate,GRO-seq,A. thaliana,Yes,4,No,Yes,No,No,No
Liu2021transcription,PRO-seq,H. sapiens,Yes,1,Yes,No,Yes,No,Yes
Lloret-llinares2018rna,PRO-seq,M. musculus,Yes,1,No,Yes,No,No,Yes
Lozano2018rna,PRO-seq,"Z. mays, M. esculenta",No,2.5,No,No,No,No,No
Lu2017nascent,other,P. falciparum,Yes,4,No,No,Yes,No,No
Luo2014dynamic,GRO-seq,H. sapiens,Yes,1,No,No,Yes,No,No
Ma2020super,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,Yes
Magnuson2015identifying,other,H. sapiens,Yes,3,No,No,No,No,No
Mahat2016mammalian,PRO-seq,M. musculus,Yes,1,No,No,Yes,No,No
Malinen2017crosstalk,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
Marazzi2012suppression,GRO-seq,H. sapiens,Yes,3,No,Yes,Yes,No,No
Mayer2015native,NET-seq,H. sapiens,Yes,4,No,Yes,No,No,No
Mckinlay2011genome,PRO-seq,S. cerevisiae,Yes,5,No,Yes,No,No,No
Meng2014convergent,GRO-seq,"M. musculus, H. sapiens",Yes,4,No,No,Yes,No,No
Meyerswallen2017xx,ChRO-seq,C. lupus familiaris,Yes,3,No,Yes,No,No,Yes
Miller2015senataxin,GRO-seq,H. sapiens,Yes,5,No,Yes,No,No,No
Min2011regulating,GRO-seq,M. musculus,Yes,5,No,No,No,No,No
Mohn2014rhino,GRO-seq,D. melanogaster,Yes,4.5,No,Yes,Yes,No,Yes
Moreau2018transcriptional,GRO-seq,H. sapiens,Yes,2,No,Yes,No,No,No
Mukai2020chromatin,ChRO-seq,C. lupus familiaris,Yes,4,No,No,No,No,No
Murakami2017dynamic,GRO-seq,H. sapiens,Yes,3,No,No,Yes,No,No
Nair2019phase,GRO-seq,"H. sapiens, M. musculus",Yes,1,Yes,No,Yes,Yes,No
Nelson2018ppar,GRO-seq,M. musculus,Yes,2,No,Yes,Yes,No,No
Ngoc2017human,GRO-seq,H. sapiens,Yes,3,No,No,No,No,No
Nguyen2020dichotomous,GRO-seq,M. musculus,Yes,3,No,Yes,Yes,No,No
Nilson2017oxidative,PRO-seq,H. sapiens,Yes,1.5,No,No,Yes,No,No
Niskanen2015global,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
Niskanen2018endothelial,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,Yes
Nojima2015mammalian,"NET-seq, other",H. sapiens,Yes,2,No,Yes,No,No,No
Oh2021enhancer,GRO-seq,H. sapiens,Yes,2,No,No,Yes,Yes,No
Oittinen2017polycomb,GRO-seq,M. musculus,Yes,2,No,No,Yes,No,No
Orioli2016human,other,H. sapiens,Yes,4.5,No,No,Yes,No,Yes
Parida2019nucleotide,"PRO-seq, PRO-cap",H. sapiens,Yes,3,No,No,No,No,No
Parikh2018critical,GRO-seq,D. melanogaster,Yes,3,No,Yes,No,No,Yes
Park2020global,GRO-seq,H. sapiens,Yes,1.5,No,No,Yes,Yes,No
Parua2018cdk9-pp1,PRO-seq,S. pombe,Yes,4,No,No,Yes,No,No
Patel2020robust,PRO-seq,H. sapiens,Yes,2,No,Yes,No,No,Yes
Perreault2019epigenetic,PRO-seq,H. sapiens,Yes,3.5,No,No,Yes,No,Yes
Phanstiel2017static,PRO-seq,H. sapiens,Yes,4,Yes,Yes,Yes,Yes,No
Puc2015ligand,"GRO-seq, PRO-cap",H. sapiens,Yes,2.5,No,No,Yes,No,No
Rahnamoun2017mutant,GRO-seq,H. sapiens,Yes,1,No,Yes,Yes,No,No
Rao2017cohesin,PRO-seq,H. sapiens,Yes,1,No,No,Yes,Yes,No
Rozhkov2013multiple,GRO-seq,D. melanogaster,Yes,3,No,Yes,Yes,No,No
Salony2016akt,GRO-seq,H. sapiens,Yes,5,No,Yes,No,No,Yes
Santoriello2020rna,PRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,Yes
Saponaro2014recql5,GRO-seq,H. sapiens,Yes,3.5,No,No,Yes,No,No
Sasse2019nascent,GRO-seq,H. sapiens,Yes,4,No,No,Yes,No,No
Sathyan2019improved,PRO-seq,H. sapiens,Yes,3,No,No,No,No,No
Saunders2013extensive,GRO-seq,D. melanogaster,Yes,5,No,No,No,No,No
Schaaf2013genome,PRO-seq,D. melanogaster,Yes,3,No,No,No,No,Yes
Schaukowitch2017intrinsic,GRO-seq,M. musculus,Yes,3,No,Yes,No,No,No
Schick2021acute,PRO-seq,H. sapiens,Yes,1,Yes,Yes,Yes,No,No
Schoeberl2012biased,GRO-seq,T. thermophila,Yes,5,No,Yes,No,No,No
Sen2019histone,PRO-seq,H. sapiens,Yes,2,No,Yes,No,No,Yes
Sendinc2019pcif1,"PRO-seq, PRO-cap",H. sapiens,Yes,1,No,No,No,No,Yes
Shamie2020unpublished,"GRO-seq, GRO-cap",C. griseus,No,4,Yes,Yes,No,No,No
Sheridan2019widespread,"NET-seq, other, GRO-seq",H. sapiens,Yes,3,No,No,Yes,No,No
Sienski2012transcriptional,GRO-seq,D. melanogaster,Yes,3.5,No,Yes,Yes,No,Yes
Sigova2013divergent,GRO-seq,H. sapiens,Yes,1,No,Yes,No,No,Yes
Sigova2015transcription,GRO-seq,M. musculus,Yes,4,No,Yes,Yes,No,Yes
Skowronskakrawczyk2014required,GRO-seq,R. norvegicus,Yes,2,No,No,Yes,No,No
Slobodin2017transcription,GRO-seq,H. sapiens,Yes,2.5,No,Yes,No,No,Yes
Smith2021peppro,PRO-seq,H. sapiens,Yes,1,No,No,No,No,No
Soccio2015genetic,GRO-seq,M. musculus,Yes,3,No,Yes,Yes,No,No
Steinparzer2019transcriptional,"PRO-seq, GRO-seq","H. sapiens, M. musculus",Yes,3,No,Yes,No,No,No
Stender2017structural,GRO-seq,H. sapiens,Yes,3.5,No,Yes,Yes,No,No
Stengel2019histone,PRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,No
Stengel2020definition,PRO-seq,H. sapiens,Yes,1,No,Yes,Yes,No,Yes
Step2014antidiabetic,GRO-seq,M. musculus,Yes,2.5,No,No,No,No,Yes
Strikoudis2016regulation,GRO-seq,M. musculus,Yes,3,No,Yes,Yes,No,No
Sumida2018ultra,other,H. sapiens,No,5,No,Yes,Yes,No,Yes
Sun2017enhancer,GRO-seq,M. musculus,No,1,No,Yes,No,No,No
Takahashi2020role,PRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,No
Tan2016stress,GRO-seq,H. sapiens,Yes,4,No,Yes,Yes,No,Yes
Tan2018dismissal,"PRO-seq, GRO-seq",H. sapiens,Yes,2,No,No,Yes,Yes,No
Tastemel2017transcription,GRO-seq,M. musculus,Yes,3,Yes,No,No,No,No
Telese2015lrp8,GRO-seq,M. musculus,Yes,2.5,No,Yes,Yes,Yes,No
Tena2020induction,GRO-seq,M. musculus,Yes,1,No,No,No,No,Yes
Teppo2016genome,GRO-seq,H. sapiens,Yes,2,No,No,No,No,No
Thomas2019interaction,PRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,No
Tome2018single,other,"M. musculus, H. sapiens",Yes,3,No,No,No,No,No
Toropainen2016global,GRO-seq,H. sapiens,Yes,1,No,No,Yes,No,No
Trizzino2018tumor,GRO-seq,H. sapiens,Yes,4,Yes,Yes,Yes,No,No
Ueberschar2019ben,PRO-seq,D. melanogaster,Yes,4,No,Yes,Yes,No,Yes
Vaid2020release,PRO-seq,D. melanogaster,Yes,3,Yes,Yes,Yes,No,No
Veloso2013genome-wide,other,H. sapiens,Yes,1.5,No,No,No,No,No
Vian2018energetics,"other, GRO-seq",M. musculus,Yes,3,No,Yes,Yes,Yes,Yes
Vihervaara2017transcriptional,PRO-seq,H. sapiens,Yes,1.5,No,No,Yes,No,No
Vihervaara2021stress,PRO-seq,"M. musculus, H. sapiens",Yes,4,Yes,No,No,No,No
Viiri2019extensive,GRO-seq,H. sapiens,Yes,2,No,No,No,No,No
Wan2020h2bg53d,PRO-seq,H. sapiens,Yes,1,Yes,Yes,No,No,Yes
Wang2011reprogramming,GRO-seq,H. sapiens,Yes,3,No,No,Yes,No,No
Wang2014rna,"PRO-seq, GRO-seq",H. sapiens,Yes,2,No,Yes,No,No,Yes
Wang2015epigenetic,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
Wang2015lsd1n,GRO-seq,M. musculus,Yes,3,No,Yes,Yes,No,No
Wang2015molecular,GRO-seq,M. musculus,Yes,3,No,No,No,No,No
Wang2017cell,GRO-seq,M. musculus,Yes,4,No,No,No,No,Yes
Wang2018nascent,PRO-seq,M. musculus,Yes,1,No,No,No,No,No
Wang2019identification,PRO-seq,H. sapiens,Yes,1,Yes,No,No,No,No
Wang2020increased,GRO-seq,H. sapiens,Yes,1,No,No,No,No,Yes
Wang2020proapoptotic,GRO-seq,H. sapiens,Yes,1,No,No,Yes,No,No
Wei2016long,GRO-seq,M. musculus,Yes,2,No,No,No,No,Yes
Wei2016rbfox2,GRO-seq,M. musculus,Yes,3,No,No,Yes,No,Yes
Weissmiller2019inhibition,PRO-seq,H. sapiens,Yes,2,Yes,No,Yes,No,No
Williams2015pausing,GRO-seq,M. musculus,Yes,2,No,Yes,No,No,Yes
Williamson2017uv,GRO-seq,H. sapiens,Yes,1,No,Yes,No,No,Yes
Woo2018ted,PRO-seq,H. sapiens,Yes,1,No,Yes,No,No,Yes
Wu2017indentifying,GRO-seq,M. musculus,Yes,4.5,No,No,No,No,No
Xiao2019pervasive,GRO-seq,H. sapiens,Yes,4,No,No,Yes,Yes,No
Yang2013lncrna,GRO-seq,H. sapiens,Yes,1.5,No,No,Yes,No,Yes
Yang2017glucocorticoid,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
Yu2015panoramix,GRO-seq,D. melanogaster,Yes,5,No,Yes,Yes,No,No
Yu2020negative,PRO-seq,M. musculus,Yes,2,No,Yes,Yes,No,No
Zhang2015enhancer,GRO-seq,M. musculus,Yes,2,No,No,Yes,No,No
Zhang2016regulation,GRO-seq,H. sapiens,Yes,3,No,No,Yes,No,No
Zhang2017hepatic,GRO-seq,M. musculus,Yes,2.5,No,No,Yes,No,Yes
Zhang2018timing,other,H. sapiens,No,2,No,No,No,No,No
Zhang2019arerg,GRO-seq,H. sapiens,Yes,2,No,Yes,No,Yes,No
Zhang2019fundamental,GRO-seq,M. musculus,Yes,1,No,No,Yes,Yes,Yes
Zhang2020bcatenin,GRO-seq,M. musculus,Yes,5,Yes,Yes,No,No,No
Zhang2021physiological,GRO-seq,M. musculus,Yes,1,No,No,No,Yes,Yes
Zhao2016high,PRO-seq,H. sapiens,Yes,1.5,No,Yes,No,No,Yes
Zhao2019myod,PRO-seq,M. musculus,Yes,2,No,Yes,No,No,No
Zhu2017comprehensive,GRO-seq,M. musculus,Yes,3.5,No,Yes,Yes,Yes,Yes
Zhu2018rna,"NET-seq, GRO-seq",A. thaliana,Yes,3,No,Yes,No,No,No
Zhu2019non,GRO-seq,H. sapiens,Yes,1.5,No,Yes,Yes,No,No
Zhu2021calcium,GRO-seq,M. musculus,Yes,3.5,Yes,No,Yes,Yes,No
|