FastQCFastQC Report
Mon 8 Jul 2024
ES_H3K27me3_IP_T2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameES_H3K27me3_IP_T2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2471668
Sequences flagged as poor quality0
Sequence length27
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GNNNNNNNNNNNNNNNNNNNNNNNNNN134830.5455020658114277No Hit
ANNNNNNNNNNNNNNNNNNNNNNNNNN129310.5231689692952289No Hit
CNNNNNNNNNNNNNNNNNNNNNNNNNN122390.4951716816336175No Hit
TNNNNNNNNNNNNNNNNNNNNNNNNNN101010.40867139114152873No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)