FastQCFastQC Report
Mon 8 Jul 2024
ES_H3K36me3_IP_T1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameES_H3K36me3_IP_T1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11012847
Sequences flagged as poor quality0
Sequence length27
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ANNNNNNNNNNNNNNNNNNNNNNNNNN358940.3259284361255541No Hit
GNNNNNNNNNNNNNNNNNNNNNNNNNN289730.2630836513028829No Hit
TNNNNNNNNNNNNNNNNNNNNNNNNNN148750.13506952380251902No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNN130560.11855245060609669No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)