FastQCFastQC Report
Mon 8 Jul 2024
ES_H3K4me3_IP_T5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameES_H3K4me3_IP_T5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7780648
Sequences flagged as poor quality0
Sequence length36
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN603790.7760150568435945No Hit
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN485860.6244467041819652No Hit
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN365250.4694339083325708No Hit
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN256080.32912425803095063No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN108710.1397184399037201No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)