Justia Patents US Patent for Performance-enhanced protease variants III Patent (Patent # 11,124,742)
Performance-enhanced protease variants III
Sep 5, 2018 - Henkel AG & Co. KGaA
An amino acid sequence may have at least 70% sequence identity to the amino acid sequence identified in SEQ ID No. 1 over its entire length, and (a) an amino acid substitution N130D on the position corresponding to the position 30 based on the numbering according to SEQ ID No. 1, and (b) an amino acid substitution on at least one of the positions corresponding to the positions 101, 133, 144, 224, 252 or 271, in each case based on the numbering according to SEQ ID No. 1. Such proteases are particularly suitable for having an improved cleaning performance.
Latest Henkel AG & Co. KGaA Patents:
BIS(TRIETHOXYSILYLPROPYL)AMINES COMBINED WITH POYSACCHARIDES FOR CARING FOR AND SHAPING KERATINE FIBRES
TWO-COMPONENT SYSTEM FOR SMOOTHING AND CARE OF HAIR
TWO-COMPONENT SYSTEM FOR ARTIFICIAL HAIR DYEING
COMPOSITION OF ACTIVE INGREDIENTS, FOR CARE AND SURFACE MODIFICATION OF HUMAN HAIR
ACTIVE SUBSTANCE COMPOSITION FOR PROTECTING ARTIFICIALLY COLOURED HAIR
CROSS-REFERENCE TO RELATED APPLICATIONS
The present application is a national stage entry according to 35 U.S.C. § 371 of PCT application No. PCT/EP2018/073882 filed on Sep. 5, 2018; which claims priority to German application No. 10 2017 215 629.5 filed on Sep. 5, 2017; which is incorporated herein by reference in its entirety and for all purposes.
REFERENCE TO A SEQUENCE LISTING SUBMITTED VIA EFS-WEB
The content of the ASCII text file of the sequence listing named "P75332US_sequencelisting_ST25" which is 12 kb in size was created on Sep. 5, 2017 and electronically submitted via EFS-Web herewith. The sequence listing is incorporated herein by reference in its entirety.
Proteases from Bacillus pumilus of which the amino acid sequences have been altered to give them better cleaning performance at low temperatures (e.g. between 20° C. and 40° C.), and also relates to the nucleic acids coding therefor and to the production thereof.
Proteases are some of the most important enzymes. They are the longest established enzymes for washing and cleaning agents, and are contained in virtually all modern, effective washing and cleaning agents. They bring about the decomposition of protein-containing stains on the item to be cleaned. Of these, in turn, proteases of the subtilisin type (subtilases, subtilopeptidases, EC 3.4.21.62) are particularly important, which are serine proteases due to the catalytically active amino acids. They act as non-specific endopeptidases and hydrolyze any acid amide bonds that are inside peptides or proteins. Their optimum pH is usually in the distinctly alkaline range. The article "Subtilases: Subtilisin-like Proteases" by R. Siezen, pages 75-95 in "Subtilisin enzymes," published by R. Bott and C. Betzel, New York, 1996, gives an overview of this family, for example. Subtilases are, naturally, formed from microorganisms. In particular, the subtilisins formed and secreted by Bacillus species are the most significant group of subtilases.
Examples of the subtilisin proteases used in washing and cleaning agents are the subtilisins BPN' and Carlsberg, the protease PB92, the subtilisins 147 and 309, the protease from Bacillus lentus, in particular from Bacillus lentus DSM 5483, the subtilisin DY and the enzymes thermitase, proteinase K and proteases TW3 and TW7, which belong to the subtilases but no longer to the subtilisins in the narrower sense, and variants of said proteases having an amino acid sequence that has been altered with respect to the starting protease. Proteases are altered, selectively or randomly, by methods known from the prior art, and are thereby optimized for use in washing and cleaning agents, for example. These methods include point, deletion or insertion mutagenesis, or fusion with other proteins or protein parts. Appropriately optimized variants are therefore known for the majority of proteases known from the prior art.
European patent application EP 2016175 A1 discloses, for example, a protease from Bacillus pumilus intended for washing and cleaning agents. In general, only selected proteases are suitable for use in liquid, surfactant-containing preparations at all. Many proteases do not exhibit sufficient catalytic performance in such preparations. For the use of proteases in cleaning agents, therefore, a high catalytic activity under conditions as they are during a wash cycle is particularly desirable.
Consequently, protease and surfactant-containing liquid formulations from the prior art are disadvantageous in that the proteases contained, under standard washing conditions (e.g. in a temperature range of from 20° C. to 40° C.), do not have satisfactory proteolytic activity and the formulations therefore do not exhibit optimal cleaning performance on protease-sensitive stains, in particular blood-containing stains.
Surprisingly, it has now been found that a protease from Bacillus pumilus or a sufficiently similar protease (based on the sequence identity) which has (a) the amino acid substitution N130D at the position corresponding to position 130, based on the numbering according to SEQ ID NO:1, and (b) an amino acid substitution at at least one of the positions corresponding to positions 101, 133, 144, 224, 252 or 271, in each case based on the numbering according to SEQ ID NO:1, is improved in terms of proteolytic activity (in particular in terms of cleaning performance on blood-containing stains) under standard washing conditions compared with the wild-type form and is therefore particularly suitable for use in washing or cleaning agents.
The invention therefore relates, in a first aspect, to a protease comprising an amino acid sequence which has at least 70% sequence identity with the amino acid sequence given in SEQ ID NO:1 over its entire length and has (i) the amino acid substitution N130D at the position corresponding to position 130 according to SEQ ID NO:1, and (ii) an amino acid substitution at at least one of the positions corresponding to positions 101, 133, 144, 224, 252 or 271, in each case based on the numbering according to SEQ ID NO:1. In various embodiments, the protease has at least one substitution at position 271, such as Q271E. The protease may have two or three further substitutions at one of positions 101, 133, 144, 224, and 252.
The invention also relates to a method for producing a protease comprising the substitution of amino acids in a starting protease which has at least 70% sequence identity with the amino acid sequence given in SEQ ID NO:1 over its entire length (i) at the position corresponding to position 130 in SEQ ID NO:1 with the amino acid substitution N130D, and (ii) at at least one position corresponding to positions 101, 133, 144, 224, 252 or 271 in SEQ ID NO:1, such that the protease has at least one of the amino acid substitutions D101E, T133R, N144K, S224A, N252T or Q271E.
A protease within the meaning of the present patent application therefore comprises both the protease as such and a protease produced by a method. All statements regarding the protease therefore relate both to the protease as such and to the proteases produced by means of corresponding methods.
Further aspects relate to the nucleic acids coding for these proteases, to non-human host cells containing proteases or nucleic acids, and to agents comprising proteases, in particular washing and cleaning agents, to washing and cleaning methods, and to uses of the proteases in washing or cleaning agents in order to remove protein-containing stains, in particular blood-containing stains.
"At least one," as used herein, means one or more, i.e. 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14 or more.
The inventors discovered that (a) an amino acid substitution at the position corresponding to position 130, based on the numbering according to SEQ ID NO:1, such that the protease comprises the amino acid substitution N130D at the position, and (b) an amino acid substitution at at least one of the positions corresponding to positions 101, 133, 144, 224, 252 or 271 of the protease from Bacillus pumilus according to SEQ ID NO:1, in a protease comprising an amino acid sequence that is at least 70% identical to the amino acid sequence given in SEQ ID NO:1, such that the amino acids 101E, 133R, 144K, 224A, 252T or 271E are present at at least one of the corresponding positions, results in improved catalytic activity and/or improved storage stability of this altered protease in washing and cleaning agents. This is particularly surprising insofar as none of the above-mentioned amino acid substitutions has previously been associated with increased catalytic activity and/or increased storage stability of the protease.
The proteases have increased catalytic activity in washing or cleaning agents. In a wide variety of embodiments, the proteases have a proteolytic activity of at least 110%, at least 115%, at least 120%, at least 125%, at least 130%, at least 135%, at least 140%, at least 145%, at least 150%, at least 155% or at least 160%, based on a wild-type variant of the protease (SEQ ID NO:1). Such performance-enhanced proteases allow improved washing results on proteolytically sensitive stains in various temperature ranges, in particular in a temperature range of from 20° C. to 40° C. In embodiments, the above-mentioned proteolytic activities relate to the cleaning performance on blood-containing stains.
Independently of or in addition to increased catalytic activity, the proteases may also have improved storage stability. They may have increased stability in washing or cleaning agents in comparison with a wild-type variant of the protease (SEQ ID NO:1), in particular when stored for 3 or more days, 4 or more days, 7 or more days, 10 or more days, 12 or more days or 14 or more days. Such performance-enhanced proteases allow improved washing results on proteolytically sensitive stains in various temperature ranges, in particular in a temperature range of from 20° C. to 40° C.
The proteases exhibit enzymatic activity, i.e. they are capable of hydrolyzing peptides and proteins, in particular in a washing or cleaning agent. A protease is therefore an enzyme which catalyzes the hydrolysis of amide/peptide bonds in protein/peptide substrates and is thus able to cleave proteins or peptides. Furthermore, a protease is a mature protease, i.e. the catalytically active molecule without signal peptide(s) and/or propeptide(s). Unless stated otherwise, the sequences given also each refer to mature (processed) enzymes.
In various embodiments, the protease is a free enzyme. This means that the protease can act directly with all the components of an agent and, if the agent is a liquid agent, that the protease is in direct contact with the solvent of the agent (e.g. water). In other embodiments, an agent may contain proteases that form an interaction complex with other molecules or that contain a "coating." In this case, an individual protease molecule or multiple protease molecules may be separated from the other constituents of the agent by a surrounding structure. Such a separating structure may arise from, but is not limited to, vesicles such as a micelle or a liposome. The surrounding structure may also be a virus particle, a bacterial cell or a eukaryotic cell. In various embodiments, an agent may include cells of Bacillus pumilus or Bacillus subtilis which express the proteases, or cell culture supernatants of such cells.
Furthermore, in various embodiments, the protease contains, in addition to the substitution N130D, at least one amino acid substitution selected from the group consisting of D101E, T133R, N144K, 5224A, N252T or Q271E, in each case based on the numbering according to SEQ ID NO:1. In yet further embodiments, the protease contains at least the amino acid substitution Q271E, such as in combination with at least one other of the above-mentioned substitutions. The protease comprises one of the following amino acid substitution variants: (i) D101E, N130D, T133R, S224A and Q271E; (ii) D101E, N130D, N144K, N252T and Q271E; (iii) N130D, N144K, N252T and Q271E; or (iv) N130D, T133R, S224A and Q271E, the numbering being based in each case on the numbering according to SEQ ID NO:1.
In a further embodiment, the protease has an amino acid sequence according to one of SEQ ID Nos. 2-5.
In a further embodiment, the protease comprises an amino acid sequence which, over its entire length, is at least 70%, 71%, 72%, 73%, 74% 75%, 76%, 77%, 78%, 79%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 90.5%, 91%, 91.5%, 92%, 92.5%, 93%, 93.5%, 94%, 94.5%, 95%, 95.5%, 96%, 96.5%, 97%, 97.5%, 98%, 98.5% and 98.8% identical to the amino acid sequence given in SEQ ID NO:1, and, in each case based on the numbering according to SEQ ID NO:1, has (a) an amino acid corresponding to position 130 such that the amino acid substitution is N130D and (b) one or more of the amino acid substitutions 101E, 133R, 144K, 224A, 252T or 271E at at least one of the positions corresponding to positions 101, 133, 144, 224, 252 or 271 in the numbering according to SEQ ID NO:1. In the context, the feature whereby a protease has the stated substitutions means that it contains at least one of the corresponding amino acids at the corresponding positions, i.e. not all of the stated positions are otherwise mutated or deleted, for example by fragmentation of the protease. The amino acid sequences of such proteases are given in SEQ ID Nos: 2-5.
The identity of nucleic acid or amino acid sequences is determined by a sequence comparison. This sequence comparison is based on the BLAST algorithm established and commonly used in the prior art (cf. for example Altschul, S. F., Gish, W., Miller, W., Myers, E. W. & Lipman, D. J. (1990): "Basic local alignment search tool," J. Mol. Biol. 215: 403-410, and Altschul, Stephan F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Hheng Zhang, Webb Miller, and David J. Lipman (1997): "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs," Nucleic Acids Res. 25: 3389-3402) and in principle occurs by associating similar sequences of nucleotides or amino acids in the nucleic acid or amino acid sequences. A tabular association of the positions concerned is referred to as alignment. Another algorithm available in the prior art is the FASTA algorithm. Sequence comparisons (alignments), in particular multiple sequence comparisons, are created using computer programs. The Clustal series (cf. for example Chenna et al. (2003): "Multiple sequence alignment with the Clustal series of programs," Nucleic Acid Research 31: 3497-3500), T-Coffee (cf. for example Notredame et al. (2000): "T-Coffee: A novel method for multiple sequence alignments," J. Mol. Biol. 302: 205-217) or programs based on these programs or algorithms are frequently used, for example. Sequence comparisons (alignments) using the computer program Vector NTI® Suite 10.3 (Invitrogen Corporation, 1600 Faraday Avenue, Carlsbad, Calif., USA) with the predetermined, default parameters, and the AlignX module of which for sequence comparisons is based on ClustalW, are also possible. Unless stated otherwise, the sequence identity given herein is determined by the BLAST algorithm.
Such a comparison also allows a statement regarding the similarity of the compared sequences. It is usually given in percent identity, i.e. the proportion of identical nucleotides or amino acid residues in said sequences or in an alignment of corresponding positions. The broader concept of homology takes conserved amino acid exchanges into account in the case of amino acid sequences, i.e. amino acids having similar chemical activity, since they usually perform similar chemical activities within the protein. Therefore, the similarity between the compared sequences can also be expressed in percent homology or percent similarity. Identity and/or homology information can be provided regarding whole polypeptides or genes or only regarding individual regions. Homologous or identical regions of different nucleic acid or amino acid sequences are therefore defined by matches in the sequences. Such regions often have identical functions. They can be small and comprise only a few nucleotides or amino acids. Often, such small regions perform essential functions for the overall activity of the protein. It may therefore be expedient to relate sequence matches only to individual, optionally small regions. Unless stated otherwise, however, identity or homology information in the present application relates to the entire length of the particular nucleic acid or amino acid sequence indicated.
In the context, the indication that an amino acid position corresponds to a numerically designated position in SEQ ID NO:1 therefore means that the corresponding position is associated with the numerically designated position in SEQ ID NO:1 in an alignment as defined above.
In a further embodiment, the protease is characterized in that the cleaning performance thereof is not significantly reduced compared with that of a protease comprising an amino acid sequence that corresponds to the amino acid sequence given in SEQ ID NO:1, i.e. has at least 80% of the reference washing performance, such as at least 100%, or at least 110% or more. The cleaning performance can be determined in a washing system containing a washing agent in a dosage between 4.5 and 7.0 grams per liter of washing liquor, and the protease, the proteases to be compared being used in the same concentration (based on active protein), and the cleaning performance with respect to a stain on cotton is determined by measuring the degree of cleaning of the washed textiles. For example, the washing process can take place for 60 minutes at a temperature of 40° C. and the water can have a water hardness between 15.5 and 16.5° (German hardness). The concentration of the protease in the washing agent intended for this washing system is 0.001 to 0.1 wt. %, such as 0.01 to 0.06 wt. % based on active, purified protein.
A liquid reference washing agent for such a washing system may be composed as follows (all figures in wt. %): 4.4% alkyl benzene sulfonic acid, 5.6% further anionic surfactants, 2.4% C12-C18 Na salts of fatty acids (soaps), 4.4% non-ionic surfactants, 0.2% phosphonates, 1.4% citric acid, 0.95% NaOH, 0.01% defoamer, 2% glycerol, 0.08% preservatives, 1% ethanol, and the remainder being demineralized water. In a non-limiting embodiment, the dosage of the liquid washing agent is between 4.5 and 6.0 grams per liter of washing liquor, for example 4.7, 4.9 or 5.9 grams per liter of washing liquor. Washing in a pH range between pH 7 and pH 10.5, such as between pH 7.5 and pH 8.5.
In the context, the cleaning performance is determined for example at 20° C. or 40° C. using a liquid washing agent as stated above, the washing process being carried out for 60 minutes at 600 rpm.
The degree of whiteness, i.e. the lightening of stains, as a measure of the cleaning performance is determined by optical measuring methods, such as photometrically. A suitable device for this purpose is for example the Minolta CM508d spectrometer. Usually, the devices used for the measurement are calibrated beforehand with a white standard, such as a supplied white standard.
The activity-equivalent use of the relevant protease ensures that the respective enzymatic properties, for example the cleaning performance on certain stains, are compared even if the ratio of active substance to total protein (the values of the specific activity) diverges. In general, a low specific activity can be compensated for by adding a larger amount of protein.
Otherwise, methods for determining protease activity are well known to, and routinely used by, a person skilled in the art of enzyme technology. For example, such methods are disclosed in Tenside, vol. 7 (1970), p. 125-132. Alternatively, the protease activity can be determined by the release of the chromophore para-nitroaniline (pNA) from the substrate suc-L-Ala-L-Ala-L-Pro-L-Phe-p-nitroanilide (AAPF). The protease cleaves the substrate and releases pNA. The release of the pNA causes an increase in absorbance at 410 nm, the temporal progression of which is a measure of the enzymatic activity (cf. Del Mar et al., 1979). The measurement is carried out at a temperature of 25° C., a pH of 8.6, and a wavelength of 410 nm. The measuring time is 5 min and the measuring interval is 20s to 60s. The protease activity is usually indicated in protease units (PE). Suitable protease activities amount to 2.25, 5 or 10 PE per ml of washing liquor, for example. However, the protease activity is not equal to zero.
An alternative test for establishing the proteolytic activity of the proteases is an optical measuring method, such as a photometric method. The appropriate test involves the protease-dependent cleavage of the substrate protein casein. This is cleaved by the protease into a multitude of smaller partial products. The totality of these partial products has an increased absorption at 290 nm compared with uncleaved casein, it being possible for this increased absorption to be determined using a photometer, and thus for a conclusion to be drawn regarding the enzymatic activity of the protease.
The protein concentration can be determined using known methods, for example the BCA method (bicinchoninic acid; 2,2′-bichinolyl-4,4′-dicarboxylic acid) or the Biuret method (A. G. Gornall, C. S. Bardawill and M. M. David, J. Biol. Chem., 177 (1948), p. 751-766). The active protein concentration can be determined in this regard by titrating the active centers using a suitable irreversible inhibitor and determining the residual activity (cf. M. Bender et al., J. Am. Chem. Soc. 88, 24 (1966), p. 5890-5913).
In addition to the amino acid alterations discussed above, proteases can have other amino acid alterations, in particular amino acid substitutions, insertions or deletions. Such proteases are, for example, developed by targeted genetic alteration, i.e. by mutagenesis methods, and optimized for specific applications or with regard to specific properties (for example with regard to their catalytic activity, stability, etc.). Furthermore, nucleic acids can be introduced into recombination approaches and can thus be used to generate completely novel proteases or other polypeptides.
The aim is to introduce targeted mutations such as substitutions, insertions or deletions into the known molecules in order, for example, to improve the cleaning performance of enzymes. For this purpose, in particular the surface charges and/or the isoelectric point of the molecules and thus their interactions with the substrate can be altered. For instance, the net charge of the enzymes can be altered in order to influence the substrate binding, in particular for use in washing and cleaning agents. Alternatively or additionally, one or more corresponding mutations can increase the stability or catalytic activity of the protease and thus improve its cleaning performance. Advantageous properties of individual mutations, e.g. individual substitutions, can complement one another. A protease which has already been optimized with regard to specific properties, for example with respect to its stability during storage, can therefore also be developed.
For the description of substitutions relating to exactly one amino acid position (amino acid exchanges), the following convention is used herein: first, the naturally occurring amino acid is designated in the form of the internationally used one-letter codes, followed by the associated sequence position and finally the inserted amino acid. Several exchanges within the same polypeptide chain are separated by slashes. For insertions, additional amino acids are named following the sequence position. In the case of deletions, the missing amino acid is replaced by a symbol, for example a star or a dash, or a Δ is indicated before the corresponding position. For example, D101E describes the substitution of aspartic acid at position 101 by glutamic acid, D101EG describes the insertion of glutamic acid after the amino acid aspartic acid at position 101 and D101* or ΔD101 describes the deletion of aspartic acid at position 101. This nomenclature is known to a person skilled in the field of enzyme technology.
A protease may be characterized in that it is obtainable from a protease as described above as the starting molecule by one-time or multiple conservative amino acid substitution, the protease in the numbering according to SEQ ID NO:1 having (a) the amino acid substitution N130D at the position corresponding to position 130 in SEQ ID NO:1, and (b) at least one of the amino acid substitutions at the positions corresponding to positions 101, 133, 144, 224, 252 and 271 in SEQ ID NO:1, as described above. The term "conservative amino acid substitution" means the exchange (substitution) of one amino acid residue for another amino acid residue, with this exchange not resulting in a change to the polarity or charge at the position of the exchanged amino acid, e.g. the exchange of a nonpolar amino acid residue for another nonpolar amino acid residue. Conservative amino acid substitutions include, for example: G=A=S, I=V=L=M, D=E, N=Q, K=R, Y=F, S=T, G=A=I=V=L=M=Y=F=W=P=S=T.
Alternatively or additionally, the protease is characterized in that it is obtainable from a protease as the starting molecule by means of fragmentation or deletion, insertion or substitution mutagenesis and comprises an amino acid sequence which matches the starting molecule over a length of at least 200, 210, 220, 230, 240, 250, 260, 270 or 275 contiguous amino acids, the amino acid substitution(s) that may be contained in the starting molecule still being present at the positions corresponding to positions 101, 133, 144, 224, 252 and 271 in SEQ ID NO:1.
For instance, it is possible to delete individual amino acids at the termini or in the loops of the enzyme without the proteolytic activity being lost or diminished in the process. Furthermore, such fragmentation or deletion, insertion or substitution mutagenesis can also for example reduce the allergenicity of the enzymes concerned and thus improve their overall applicability. Advantageously, the enzymes retain their proteolytic activity even after mutagenesis, i.e. their proteolytic activity corresponds at least to that of the starting enzyme, i.e. in a non-limiting embodiment the proteolytic activity is at least 80%, such as at least 90%, of the activity of the starting enzyme. Other substitutions can also exhibit advantageous effects. Both single and multiple contiguous amino acids can be exchanged for other amino acids.
Alternatively or additionally, the protease is characterized in that it is obtainable from a protease as the starting molecule by one-time or multiple conservative amino acid substitution, the protease having (i) the amino acid substitution N130D at the position corresponding to position 130 according to SEQ ID NO:1, and (ii) at least one of the amino acid substitutions D101E, T133R, N144K, 5224A, N252T or Q271E at the positions corresponding to positions 101, 133, 144, 224, 252 and 271 according to SEQ ID NO:1.
In further embodiments, the protease is characterized in that it is obtainable from a protease as the starting molecule by fragmentation or deletion, insertion or substitution mutagenesis and comprises an amino acid sequence which matches the starting molecule over a length of at least 200, 210, 220, 230, 240, 250, 260, 270 or 275 contiguous amino acids, the protease comprising (i) the amino acid substitution N130D at the position corresponding to position 130 according to SEQ ID NO:1, and (ii) at least one of the amino acid substitutions D101E, T133R, N144K, 5224A, N252T or Q271E at the positions corresponding to positions 101, 133, 144, 224, 252 and 271 according to SEQ ID NO:1.
The further amino acid positions are in this case defined by an alignment of the amino acid sequence of a protease with the amino acid sequence of the protease from Bacillus pumilus, as given in SEQ ID NO:1. Furthermore, the assignment of the positions depends on the mature protein. This assignment is also to be used in particular if the amino acid sequence of a protease comprises a higher number of amino acid residues than the protease from Bacillus pumilus according to SEQ ID NO:1. Proceeding from the above-mentioned positions in the amino acid sequence of the protease from Bacillus pumilus, the alteration positions in a protease are those which are assigned to precisely these positions in an alignment.
Advantageous positions for sequence alterations, in particular substitutions, of the protease from Bacillus pumilus, which are of particular significance when transferred to homologous positions of the proteases and which impart advantageous functional properties to the protease are therefore the positions which correspond to positions 101, 130, 133, 144, 224, 252 and 271 in SEQ ID NO:1 in an alignment, i.e. in the numbering according to SEQ ID NO:1. At the positions mentioned, the following amino acid residues are present in the wild-type molecule of the protease from Bacillus pumilus: D101, N130, T133, N144, S224, N252 and Q271.
Further confirmation of the correct assignment of the amino acids to be altered, i.e. in particular their functional correspondence, can be provided by comparative experiments, according to which the two positions assigned to one another on the basis of an alignment are modified in the same way in both compared proteases, and observations are made as to whether the enzymatic activity is modified in the same way in both cases. If, for example, an amino acid exchange in a specific position of the protease from Bacillus pumilus according to SEQ ID NO:1 is accompanied by an alteration of an enzymatic parameter, for example an increase in the KM value, and a corresponding alteration of the enzymatic parameter, for example likewise an increase in the KM value, is observed in a protease variant of which the amino acid exchange has been achieved by the same introduced amino acid, this can therefore be considered to be confirmation of the correct assignment.
All of these aspects are also applicable to the method for producing a protease. Accordingly, a method further comprises one or more of the following method steps:
a) introducing one-time or multiple conservative amino acid substitution, the protease comprising
(i) the amino acid substitution N130D at the position corresponding to position 130 according to SEQ ID NO:1, and
(ii) at least one of the amino acid substitutions D101E, T133R, N144K, 5224A, N252T or Q271E at the positions corresponding to positions 101, 133, 144, 224, 252 and 271 according to SEQ ID NO:1;
b) altering the amino acid sequence by fragmentation or deletion, insertion or substitution mutagenesis such that the protease comprises an amino acid sequence which matches the starting molecule over a length of at least 200, 210, 220, 230, 240, 250, 260, 270 or 275 contiguous amino acids, the protease comprising
(ii) at least one of the amino acid substitutions D101E, T133R, N144K, 5224A, N252T or Q271E at the positions corresponding to positions 101, 133, 144, 224, 252 and 271 according to SEQ ID NO:1.
All embodiments also apply to the method.
In further embodiments, the protease or the protease produced by means of a method is still at least 70%, 71%, 72%, 73%, 74%, 75%, 76%, 77%, 78%, 79%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 90.5%, 91%, 91.5%, 92%, 92.5%, 93%, 93.5%, 94%, 94.5%, 95%, 95.5%, 96%, 96.5%, 97%, 97.5%, 98%, 98.5%, or 98.8% identical to the amino acid sequence given in SEQ ID NO:1 over its entire length. Alternatively, the protease or the protease produced by means of a method is still at least 70%, 71%, 72%, 73%, 74%, 75%, 76%, 77%, 78%, 79%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 90.5%, 91%, 91.5%, 92%, 92.5%, 93%, 93.5%, 94%, 94.5%, 95%, 95.5%, 96%, 96.5%, 97%, 97.5%, 98%, 98.5% or 98.8% identical to one of the amino acid sequences given in SEQ ID Nos:2-5 over its entire length. The protease or the protease produced by means of a method has an amino acid substitution at position 130 and at at least one of the positions corresponding to positions 101, 133, 144, 224, 252 and 271, in each case based on the numbering according to SEQ ID NO:1. In more embodiments, the amino acid substitution is at least one selected from the group consisting of D101E, N130D, T133R, N144K, S224A, N252T and Q271E, in each case based on the numbering according to SEQ ID NO:1. In further embodiments, the protease comprises one of the following amino acid substitution variants: (i) D101E, N130D, T133R, S224A and Q271E; (ii) D101E, N130D, N144K, N252T and Q271E; (iii) N130D, N144K, N252T and Q271E; or (iv) N130D, T133R, S224A and Q271E, the numbering being based in each case on the numbering according to SEQ ID NO:1.
A protease described above which is additionally stabilized, in particular by one or more mutations, for example substitutions, or by coupling to a polymer. An increase in stability during storage and/or during use, for example in the washing process, leads to longer enzymatic activity and thus improves the cleaning performance. In principle, all stabilization options which are described in the prior art and/or are appropriate are considered. Those stabilizations are achieved by mutations of the enzyme itself, since such stabilizations do not require any further work steps following the recovery of the enzyme. Examples of sequence alterations suitable for this purpose are mentioned above. Further suitable sequence alterations are known from the prior art.
Further possibilities for stabilization are, for example:
altering the binding of metal ions, in particular the calcium binding sites, for example by exchanging one or more of the amino acid(s) that are involved in the calcium binding with one or more negatively charged amino acids and/or by introducing sequence alterations in at least one of the sequences of the two amino acids arginine/glycine;
protecting against the influence of denaturing agents such as surfactants by mutations that cause an alteration of the amino acid sequence on or at the surface of the protein;
exchanging amino acids near the N-terminus with those likely to contact the rest of the molecule via non-covalent interactions, thus contributing to the maintenance of the globular structure.
Non-limiting embodiments are those in which the enzyme is stabilized in several ways, as several stabilizing mutations act additively or synergistically.
A protease as described above, which is characterized in that it has at least one chemical modification. A protease with such an alteration is referred to as a derivative, i.e. the protease is derivatized.
In the context of the present application, derivatives are thus understood to mean those proteins of which the pure amino acid chain has been chemically modified. Such derivatizations can be achieved, for example, in vivo by the host cell that expresses the protein. In this regard, couplings of low-molecular-weight compounds such as lipids or oligosaccharides are particularly noteworthy. However, the derivatizations may also be carried out in vitro, for example by the chemical conversion of a side chain of an amino acid or by covalent bonding of another compound to the protein. For example, it is possible to couple amines to carboxyl groups of an enzyme in order to alter the isoelectric point. Another such compound may also be another protein that is bound to a protein via bifunctional chemical compounds, for example. Derivatization is also understood to mean the covalent bonding to a macromolecular carrier or a non-covalent inclusion in suitable macromolecular cage structures. Derivatizations may, for example, affect the substrate specificity or bonding strength to the substrate or cause a temporary blockage of the enzymatic activity when the coupled substance is an inhibitor. This can be expedient, for example, for the period of storage. Such modifications may further affect the stability or enzymatic activity. They can also be used to reduce the allergenicity and/or immunogenicity of the protein and thus, for example, increase its skin compatibility. For example, couplings with macromolecular compounds, for example polyethylene glycol, can improve the protein in terms of stability and/or skin compatibility.
Derivatives of a protein can also be understood in the broadest sense to mean preparations of these proteins. Depending on the recovery, processing or preparation, a protein can be combined with various other substances, for example from the culture of the producing microorganisms. A protein may also have been deliberately added to other substances, for example to increase its storage stability. This is also irrespective of whether or not it actually exhibits this enzymatic activity in a particular preparation. This is because it may be desired that it has no or only low activity during storage, and exhibits its enzymatic function only at the time of use. This can be controlled via appropriate accompanying substances, for example. In particular, the joint preparation of proteases with specific inhibitors is possible in this regard.
Of all the proteases or protease variants and/or derivatives described above, in the context, those of which the catalytic activity corresponds to at least one of those of the proteases according to SEQ ID Nos: 2-5, and/or of which the cleaning performance corresponds to at least one of those of the proteases according to SEQ ID Nos: 2-5, the cleaning performance being determined in a washing system as described above.
In a further aspect, a protease which comprises an amino acid sequence may have at least 70% sequence identity with the amino acid sequence given in SEQ ID NO:1 over its entire length and which comprises the amino acid substitution N130D, based on the numbering according to SEQ ID NO:1.
All aspects, objects and embodiments described for above-described proteases and agents containing them are also applicable to this subject matter. Therefore, reference is expressly made at this point to the disclosure at the appropriate point with the note that this disclosure also applies to the above-described use.
A nucleic acid may code for a protease, a vector may contain a nucleic acid, in particular a cloning vector or an expression vector.
These may be DNA or RNA molecules. They can be present as a single strand, as a single strand that is complementary to this single strand, or as a double strand. In particular in the case of DNA molecules, the sequences of the two complementary strands must be taken into account in all three possible reading frames. Furthermore, it should be noted that different codons, i.e. base triplets, can code for the same amino acids such that a particular amino acid sequence can be coded by a plurality of different nucleic acids. Due to this degeneracy of the genetic code, all of the nucleic acid sequences which can code any of the proteases described above are included in this subject matter. A person skilled in the art is able to determine these nucleic acid sequences unequivocally since, despite the degeneracy of the genetic code, defined amino acids can be assigned to individual codons. Therefore, a person skilled in the art proceeding from an amino acid sequence can easily determine nucleic acids coding for said amino acid sequence. Furthermore, in the case of nucleic acids, one or more codons may be replaced by synonymous codons. This aspect relates in particular to the heterologous expression of the enzymes. For instance, every organism, for example a host cell of a production strain, has a particular codon usage. Codon usage is understood to mean the translation of the genetic code into amino acids by the relevant organism. Bottlenecks can occur in the protein biosynthesis if the codons on the nucleic acid in the organism are faced with a comparatively small number of loaded tRNA molecules. Although coding for the same amino acid, this results in a codon being translated less efficiently in the organism than a synonymous codon coding for the same amino acid. Due to the presence of a higher number of tRNA molecules for the synonymous codon, it can be translated more efficiently in the organism.
Using methods which are currently generally known, such as chemical synthesis or the polymerase chain reaction (PCR), in conjunction with molecular-biological and/or protein-chemical standard methods, it is possible for a person skilled in the art to produce the corresponding nucleic acids and even complete genes on the basis of known DNA and/or amino acid sequences. Such methods are known for example from Sambrook, J., Fritsch, EF and Maniatis, T. 2001. Molecular cloning: a laboratory manual, 3. Edition Cold Spring Laboratory Press.
Within the meaning, vectors are understood to mean elements consisting of nucleic acids, which elements contain a nucleic acid as the characteristic nucleic acid region. They are able to establish these as a stable genetic element in a species or cell line over several generations or cell divisions. Vectors are special plasmids, i.e. circular genetic elements, in particular when used in bacteria. In the context, a nucleic acid is cloned into a vector. The vectors include, for example, those originating from bacterial plasmids, viruses or bacteriophages, or predominantly synthetic vectors or plasmids with elements of a wide variety of origins. With the additional genetic elements present in each case, vectors are able to establish themselves as stable units in the corresponding host cells over several generations. They may be present as separate units in an extrachromosomal manner or integrated into a chromosome or chromosomal DNA.
Expression vectors comprise nucleic acid sequences which enable them to replicate in the host cells containing them, such as microorganisms, e.g. bacteria, and to express a contained nucleic acid there. The expression is in particular influenced by the promoter(s) that regulate the transcription. In principle, the expression can take place by the natural promoter originally located before the nucleic acid to be expressed, but also by a promoter of the host cell provided on the expression vector or also by a modified or completely different promoter of another organism or another host cell. In the present case, at least one promoter is provided for the expression of a nucleic acid and used for the expression thereof. Furthermore, expression vectors can be regulatable, for example by modifying the cultivation conditions or when a specific cell density of the host cells containing them is reached or by addition of specific substances, in particular activators of gene expression. An example of such a substance is the galactose derivative isopropyl-β-D-thiogalactopyranoside (IPTG), which is used as an activator of the bacterial lactose operon (lac operon). In contrast with expression vectors, the nucleic acid contained is not expressed in cloning vectors.
A non-human host cell may contain a nucleic acid or a vector or which contains a protease, in particular one which secretes the protease into the medium surrounding the host cell. In a non-limiting embodiment, a nucleic acid or a vector is transformed into a microorganism, which then represents a host cell. Alternatively, individual components, i.e. nucleic acid parts or fragments of a nucleic acid, can be introduced into a host cell such that the resulting host cell contains a nucleic acid or a vector. This procedure is particularly suitable when the host cell already contains one or more constituents of a nucleic acid or a vector and the further constituents are then supplemented accordingly. Methods for transforming cells are established in the prior art and are well known to a person skilled in the art. In principle, all cells, i.e. prokaryotic or eukaryotic cells, are suitable as host cells. Host cells that can be managed in a genetically advantageous manner, for example in terms of the transformation with the nucleic acid or the vector and the stable establishment thereof, are possible, for example unicellular fungi or bacteria. Furthermore, host cells are characterized by good microbiological and biotechnological manageability. This relates, for example, to easy cultivation, high growth rates, low requirements for fermentation media and good production and secretion rates for foreign proteins. Non-limiting host cells secrete the (transgenically) expressed protein into the medium surrounding the host cells. Furthermore, the proteases can be modified by the cells producing them after their production, for example by attachment of sugar molecules, formylations, aminations, etc. Such post-translational modifications can functionally influence the protease.
Other embodiments are those host cells of which the activity can be regulated on account of genetic regulatory elements, which are, for example, made available on the vector but may also be present in these cells from the outset. These host cells may be induced to express for example by the controlled addition of chemical compounds which are used as activators, by modifying the cultivation conditions, or when a specific cell density is reached. This enables economical production of the proteins. An example of such a compound is IPTG, as described above.
Prokaryotic or bacterial cells are host cells. Bacteria are characterized by short generation times and low demands on cultivation conditions. As a result, cost-effective cultivation methods or production methods can be established. In addition, a person skilled in the art has a wealth of experience in the case of bacteria in fermentation technology. For a specific production, gram-negative or gram-positive bacteria may be suitable for a wide variety of reasons to be determined experimentally in individual cases, such as nutrient sources, product formation rate, time requirement, etc.
In the case of gram-negative bacteria, such as Escherichia coli, a large number of proteins are secreted into the periplasmic space, i.e. into the compartment between the two membranes enclosing the cells. This may be advantageous for particular applications. Furthermore, gram-negative bacteria can also be designed such that they eject the expressed proteins not only into the periplasmic space, but into the medium surrounding the bacterium. In contrast, gram-positive bacteria such as bacilli or actinomycetes or other representatives of Actinomycetales have no outer membrane, and therefore secreted proteins are released immediately into the medium surrounding the bacteria, usually the nutrient medium, from which the expressed proteins can be purified. They can be isolated directly from the medium or further processed. In addition, gram-positive bacteria are related or identical to most of the origin organisms for technically significant enzymes and usually even form comparable enzymes, meaning that they have a similar codon usage and the protein synthesizer is naturally aligned accordingly.
Host cells may be altered in terms of their requirements for the culture conditions, may have different or additional selection markers or may express other or additional proteins. In particular, this may also involve those host cells which transgenically express several proteins or enzymes.
All microorganisms, in particular to all fermentable microorganisms, such as those of the genus Bacillus, allow for the production of proteins by the use of such microorganisms. Such microorganisms then represent host cells within the meaning.
In a further embodiment, the host cell is characterized in that it is a bacterium, e.g. one selected from the group of the genera of Escherichia, Klebsiella, Bacillus, Staphylococcus, Corynebacterium, Arthrobacter, Streptomyces, Stenotrophomonas and Pseudomonas, or more specifically one selected from the group of Escherichia coli, Klebsiella planticola, Bacillus licheniformis, Bacillus lentus, Bacillus amyloliquefaciens, Bacillus subtilis, Bacillus alcalophilus, Bacillus globigii, Bacillus gibsonii, Bacillus clausii, Bacillus halodurans, Bacillus pumilus, Staphylococcus carnosus, Corynebacterium glutamicum, Arthrobacter oxidans, Streptomyces lividans, Streptomyces coelicolor and Stenotrophomonas maltophilia.
The host cell may also be a eukaryotic cell, however, which is characterized in that it has a cell nucleus. A host cell may be characterized in that it has a cell nucleus. In contrast with prokaryotic cells, eukaryotic cells are capable of post-translationally modifying the protein formed. Examples thereof are fungi such as actinomycetes or yeasts such as Saccharomyces or Kluyveromyces. This can be particularly advantageous, for example, if the proteins are to undergo specific modifications in connection with their synthesis that make such systems possible. Modifications carried out by eukaryotic systems, in particular in connection with the protein synthesis, include, for example, the binding of low-molecular-weight compounds such as membrane anchors or oligosaccharides. Such oligosaccharide modifications may be desirable, for example, to lower the allergenicity of an expressed protein. Co-expression with the enzymes naturally formed by such cells, such as cellulases, may be advantageous. Furthermore, for example, thermophilic fungal expression systems may be particularly suitable for the expression of temperature-resistant proteins or variants.
The host cells are cultivated and fermented in the conventional way, for example in discontinuous or continuous systems. In the first case, a suitable nutrient medium is inoculated with the host cells and the product is harvested from the medium after a period to be determined experimentally. Continuous fermentations are characterized by the achievement of a flow equilibrium, in which cells partially die over a comparatively long period of time but also grow back and the protein formed can be removed from the medium at the same time.
Host cells are used to produce proteases. A method for producing a protease, may include
a) cultivating a host cell, and
b) isolating the protease from the culture medium or from the host cell.
This subject matter comprises fermentation processes. Fermentation processes are known per se from the prior art and represent the actual large-scale production step, usually followed by a suitable purification method of the prepared product, for example the proteases. All fermentation processes which are based on a corresponding method for producing a protease constitute embodiments of this subject matter.
Fermentation processes which are characterized in that the fermentation is carried out via a feed strategy shall be considered in particular. In this case, the media constituents that are consumed by the continuous cultivation are added. As a result, considerable increases can be achieved both in the cell density and in the cell mass or dry mass and/or in particular in the activity of the protease of interest. Furthermore, the fermentation can also be designed in such a way that undesired metabolic products are filtered out or neutralized by adding buffers or suitable counter ions.
The produced protease can be harvested from the fermentation medium. Such a fermentation process is better than isolation of the protease from the host cell, i.e. product preparation from the cell mass (dry matter), but requires the provision of suitable host cells or one or more suitable secretion markers or mechanisms and/or transport systems for the host cells to secrete the protease into the fermentation medium. Without secretion, the protease can alternatively be isolated from the host cell, i.e. purified from the cell mass, for example by precipitation with ammonium sulphate or ethanol, or by chromatographic purification.
All of the above-mentioned aspects can be combined into methods in order to produce a protease.
An agent may be characterized in that it contains a protease as described above. The agent is a washing or cleaning agent.
This subject matter covers all conceivable types of washing or cleaning agents, both concentrates and undiluted agents, for use on a commercial scale, in washing machines or for hand washing or cleaning. These include washing agents for textiles, carpets, or natural fibers, for which the term washing agent is used. These include, for example, dishwashing detergents for dishwashers or manual dishwashing detergents or cleaners for hard surfaces such as metal, glass, porcelain, ceramics, tiles, stone, painted surfaces, plastics, wood or leather, for which the term cleaning agent is used, i.e. in addition to manual and mechanical dishwashing detergents, also, for example, scouring agents, glass cleaners, WC toilet scenters, etc. The washing and cleaning agents also include auxiliary washing agents which are added to the actual washing agent during manual or automatic textile washing in order to achieve a further effect. Furthermore, washing and cleaning agents also include textile pre-treatment and post-treatment agents, i.e. those agents with which the item of laundry is brought into contact before the actual washing cycle, for example to loosen stubborn soiling, and also those agents which give the laundry further desirable properties such as a pleasant feel, crease resistance or low static charge in a step subsequent to the actual textile wash. Inter alia, softeners are included in the last-mentioned agents.
The washing or cleaning agents, which may be in the form of powdered solids, in further-compacted particulate form, as homogeneous solutions or suspensions, may contain, in addition to a protease, all known ingredients conventional in such agents, with at least one other ingredient being present in the agent. The agents may in particular contain surfactants, builders, peroxygen compounds or bleach activators. They may also contain water-miscible organic solvents, further enzymes, sequestering agents, electrolytes, pH regulators and/or further auxiliaries such as optical brighteners, graying inhibitors, foam regulators, as well as dyes and fragrances, and combinations thereof.
In particular, a combination of a protease with one or more further ingredients of the agent is advantageous, since, in embodiments, such an agent has improved cleaning performance by virtue of resulting synergisms. In particular, combining a protease with a surfactant and/or a builder and/or a peroxygen compound and/or a bleach activator can result in such a synergism. However, in embodiments, the agent may not contain boric acid.
Advantageous ingredients of agents are disclosed in international patent application WO2009/121725, starting at the penultimate paragraph of page 5 and ending after the second paragraph on page 13. Reference is expressly made to this disclosure and the disclosure therein is incorporated in the present patent application by reference.
An agent advantageously contains the protease in an amount of from 2 μg to 20 mg, such as from 5 μg to 17.5 mg, alternatively from 20 μg to 15 mg or from 50 μg to 10 mg per g of the agent. Further, the protease contained in the agent, and/or other ingredients of the agent, may be coated with a substance which is impermeable to the enzyme at room temperature or in the absence of water, and which becomes permeable to the enzyme under conditions of use of the agent. Such an embodiment is thus characterized in that the protease is coated with a substance which is impermeable to the protease at room temperature or in the absence of water. Furthermore, the washing or cleaning agent itself may also be packaged in a container, such as an air-permeable container, from which it is released shortly before use or during the washing process.
In further embodiments, the agent is characterized in that it
(a) is present in solid form, in particular as a flowable powder having a bulk density of from 300 g/l to 1200 g/l, in particular from 500 g/l to 900 g/l, or
(b) is present in pasty or liquid form, and/or
(c) is present in the form of a gel or in the form of dosing pouches, and/or
(d) is present as a single-component system, or
(e) is divided into a plurality of components.
These embodiments include all solid, powdered, liquid, gel or pasty administration forms of agents, which may optionally also consist of a plurality of phases and can be present in compressed or uncompressed form. The agent may be present as a flowable powder, in particular having a bulk density of from 300 g/l to 1200 g/l, in particular from 500 g/l to 900 g/l or from 600 g/l to 850 g/l. The solid administration forms of the agent also include extrudates, granules, tablets or pouches. Alternatively, the agent may also be in liquid, gel or pasty form, for example in the form of a non-aqueous liquid washing agent or a non-aqueous paste or in the form of an aqueous liquid washing agent or a water-containing paste. The agent may also be present as a one-component system. Such agents consist of one phase. Alternatively, an agent may also consist of a plurality of phases. Such an agent is therefore divided into a plurality of components.
Washing or cleaning agents may contain only one protease. Alternatively, they may also contain other hydrolytic enzymes or other enzymes in a concentration that is expedient for the effectiveness of the agent. A further embodiment is therefore represented by agents which further comprise one or more further enzymes. Further enzymes which can be used are all enzymes which can exhibit catalytic activity in the agent, in particular a lipase, amylase, cellulase, hemicellulase, mannanase, tannase, xylanase, xanthanase, xyloglucanase, β-glucosidase, glucosidase, pectinase, carrageenase, perhydrolase, oxidase, oxidoreductase or another protease, which may be different from the proteases, as well as mixtures thereof. Further enzymes are advantageously contained in the agent in an amount of from 1×10−8 to 5 wt. % based on active protein. Each further enzyme is contained in agents in an amount of from 1×10−7 to 3 wt. %, such as from 0.00001 to 1 wt. %, alternatively from 0.00005 to 0.5 wt. %, for example from 0.0001 to 0.1 wt. %, or from 0.0001 to 0.05 wt. %, based on active protein. The enzymes exhibit synergistic cleaning performance on specific stains or spots, i.e. the enzymes contained in the agent composition support one another in their cleaning performance. There is such synergism between the protease contained and a further enzyme of an agent, including in particular between said protease and an amylase and/or a lipase and/or a mannanase and/or a cellulase and/or a pectinase. Synergistic effects can arise not only between different enzymes, but also between one or more enzymes and other ingredients of the agent.
In the cleaning agents described herein, the enzymes to be used may furthermore be formulated together with accompanying substances, for example from fermentation. In liquid formulations, the enzymes are used as enzyme liquid formulation(s).
The enzymes are generally not provided in the form of pure protein, but rather in the form of stabilized, storable and transportable preparations. These ready-made preparations include, for example, the solid preparations obtained through granulation, extrusion, or lyophilization or, particularly in the case of liquid or gel agents, solutions of the enzymes, which are advantageously maximally concentrated, have a low water content, and/or are supplemented with stabilizers or other auxiliaries.
Alternatively, the enzymes can also be encapsulated, for both the solid and the liquid administration form, for example by spray-drying or extrusion of the enzyme solution together with a natural polymer or in the form of capsules, for example those in which the enzymes are enclosed in a set gel, or in those of the core-shell type, in which an enzyme-containing core is coated with a water-, air-, and/or chemical-impermeable protective layer. In the case of overlaid layers, other active ingredients, such as stabilizers, emulsifiers, pigments, bleaching agents, or dyes, can be additionally applied. Such capsules are applied using inherently known methods, for example by shaking or roll granulation or in fluidized bed processes. Such granules are advantageously low in dust, for example due to the application of polymeric film-formers, and stable in storage due to the coating.
Moreover, it is possible to formulate two or more enzymes together, such that a single granule exhibits a plurality of enzyme activities.
The enzymes can also be incorporated in water-soluble films, such as those used in the formulation of washing and cleaning agents in a unit dosage form. Such a film allows the release of the enzymes following contact with water. As used herein, "water-soluble" refers to a film structure that is completely water-soluble. In a non-limiting embodiment, such a film consists of (fully or partially hydrolyzed) polyvinyl alcohol (PVA).
A method for cleaning textiles or hard surfaces may be characterized in that an agent is used in at least one method step, or in that a protease becomes catalytically active in at least one method step, in particular such that the protease is used in an amount of from 40 μg to 4 g, such as from 50 μg to 3 g, particularly alternatively from 100 μg to 2 g, or from 200 μg to 1 g.
In various embodiments, the method described above is characterized in that the protease is used at a temperature of 0-100° C., such as 0-60° C., alternatively 20-40° C. or at a temperature of 20° C.
These include both manual and mechanical methods. Methods for cleaning textiles are generally characterized by the fact that, in a plurality of method steps, various cleaning-active substances are applied to the material to be cleaned and washed off after the exposure time, or in that the material to be cleaned is otherwise treated with a washing agent or a solution or dilution of this agent. The same applies to methods for cleaning all materials other than textiles, in particular hard surfaces. All conceivable washing or cleaning methods can be enhanced in at least one of the method steps by the use of a washing or cleaning agent or a protease, and then represent various embodiments. All aspects, objects and embodiments described for the protease and agents containing it are also applicable to this subject matter. Therefore, reference is expressly made at this point to the disclosure at the appropriate point with the note that this disclosure also applies to the above-described methods.
Since proteases naturally already have hydrolytic activity and also exhibit this in media which otherwise have no cleaning power, for example in a simple buffer, a single and/or the sole step of such a method can consist in a protease, which is the only cleaning-active component, being brought into contact with the stain, such as in a buffer solution or in water. This constitutes a further embodiment of this subject matter.
Alternative embodiments of this subject matter are also represented by methods for treating textile raw materials or for textile care, in which a protease becomes active in at least one method step. Among these, methods for textile raw materials, fibers or textiles with natural constituents are suitable, such as those with wool or silk.
Finally, the embodiments also encompass the use of the proteases described herein in washing or cleaning agents, for example as described above, for the (improved) removal of protein-containing stains, in particular blood-containing stains, for example from textiles or hard surfaces.
All aspects, objects and embodiments described for the protease and agents containing it are also applicable to this subject matter. Therefore, reference is expressly made at this point to the disclosure at the appropriate point with the note that this disclosure also applies to the above-described use.
Overview of the Mutations:
A subtilisin-type alkaline protease from Bacillus pumilus may be useable herein. From this protease HP388, variants were produced by random mutagenesis, which were then screened, inter alia for improved washing performance. Some mutations were found to be particularly advantageous. Said mutations lead to significantly improved performance.
Based on the best variants of several rounds of directed and undirected evolution special mutation variants were produced.
Variant Sequenc SEQ ID NO:
Wild type 1 Mutant 1 D101E N130D T133R S224A Q271E 2 Mutant 2 D101E N130D N144K N252T Q271E 3 Mutant 3 N130D N144K N252T Q271E 4 Mutant 4 N130D T133R S224A Q271E 5
Washing Agent Matrix used
The following washing agent matrix (commercially available, without enzymes, opt. brighteners, perfume and dyes) was the matrix used for the washing test:
Wt. % of active Wt. % of active substance in the substance in the Chemical name raw material formulation
Demineralized water 100 Remainder Alkyl benzene sulfonic 96 4.4 acid Anionic surfactants 70 5.6 C12-C18 fatty 30 2.4 acid Na salt Non-ionic surfactants 100 4.4 Phosphonates 40 0.2 Citric acid 100 1.4 NaOH 50 0.95 Defoamer t.q. 0.01 Glycerol 100 2 Preservatives 100 0.08 Ethanol 93 1 Without opt. brighteners, perfume, dye and enzymes. Dosage 4.7 g/L
Protease Activity Assays
The activity of the protease is determined by the release of the chromophore para-nitroaniline from the substrate succinyl alanine-alanine-proline-phenylalanine-para-nitroanilide (AAPFpNA; Bachem L-1400). The release of the pNA causes an increase in absorbance at 410 nm, the temporal progression of which is a measure of the enzymatic activity.
The measurement was carried out at a temperature of 25° C., a pH of 8.6, and a wavelength of 410 nm. The measuring time was 5 minutes with a measuring interval of from 20 to 60 seconds.
Measurement Approach:
10 μL AAPF solution (70 mg/mL)
1000 μL Tris/HCl (0.1 M, pH 8.6 with 0.1% Brij 35)
10 μL diluted protease solution
Kinetics created over 5 min at 25° C. (410 nm)
Washing Test and Results
Washing test with Bacillus subtilis culture supernatants containing the screened protease mutants by heterologous expression. The supernatants are used in washing agents in the equivalent activity to the benchmark=wild type HP388 (according to SEQ ID NO:1) at a market-standard concentration for proteases.
Conditions: 40° C., 16° dH water, 1 h
Stains:
1. CFT CS038
2. CFT PC-10
3. WfK 10N
4. CFT C-03
5. EMPA 112
Punched-out pieces of fabric (diameter=10 mm) were placed in a microtiter plate, washing liquor was preheated to 40° C., with a final concentration of 4.7 g/L, the liquor and enzyme were added to the stain and incubated for 1 h at 40° C. and 600 rpm, then the stain was rinsed several times with clear water and left to dry and the brightness was determined using a color-measuring device. The lighter the fabric, the better the cleaning performance. The L value=brightness is measured here, and the higher the brighter. The sum of the 6 stains is given in % based on the wild type HP388 according to SEQ ID NO:1.
Catalytic activity (based on catalytic activity of wild type HP388 (SEQ ID NO: 1))
Variant 40° C. 20° C. Wild type 100% 100% Mutant 1 106% nd Mutant 2 98% nd Mutant 3 98% 122% Mutant 4 110% 127%
Some variants exhibit increased washing performance in comparison with the wild type according to SEQ ID NO:1. Mutant 3 is improved only at 20° C.
The cleaning performance on blood can be demonstrated in particular on the stain CFT C-05 at 40° C. What is given below is again the performance in % based on the WT according to SEQ ID NO:1.
Catalytic activity (based on catalytic activity of wild type (SEQ ID NO: 1)) Variant 40° C.
Wild type 100% Mutant 1 118% Mutant 2 118% Mutant 3 112% Mutant 4 118%
All variants exhibit increased cleaning performance on blood by comparison with the wild type (according to SEQ ID NO:1). The improvements are produced at 40° C.
1. A protease comprising:
an amino acid sequence having at least 95% sequence identity with the amino acid sequence given in SEQ ID NO:1 over its entire length and having, in each case based on the numbering according to SEQ ID NO:1,
(a) an amino acid substitution N130D at the position corresponding to position 130, based on the numbering according to SEQ ID NO:1, and
(b) an amino acid substitution at at least one of the positions corresponding to positions 101, 133, 144, 224, 252, 271, or combinations thereof, in each case based on the numbering according to SEQ ID NO:1.
2. The protease according to claim 1, wherein the at least one amino acid substitution according to (b) is selected from the group consisting of D101E, T133R, N144K, S224A, N252T, Q271E, or combinations thereof in each case based on the numbering according to SEQ ID NO:1.
3. The protease according to claim 1, wherein the protease comprises:
(A) one of the following amino acid substitution variants, in each case based on the numbering according to SEQ ID NO:1: (i) D101E, N130D, T133R, S224A, and Q271E; (ii) D101E, N130D, N144K, N252T, and Q271E; (iii) N130D, N144K, N252T, and Q271E; or (iv) N130D, T133R, S224A, and Q271E; and/or
(B) an amino acid sequence according to one of SEQ ID Nos. 2-5.
4. A protease according to claim 1 as a starting molecule by one-time or multiple conservative amino acid substitution, wherein the protease comprises:
(i) an amino acid substitution N130D at the position corresponding to position 130 based on the numbering according to SEQ ID NO:1, and
(ii) at least one of the amino acid substitutions D101E, T133R, N144K, S224A, N252T or Q271E at the positions corresponding to positions 101, 133, 144, 224, 252 and 271 based on the numbering according to SEQ ID NO:1; and/or
(iii) wherein the protease optionally comprises an amino acid sequence matching the starting molecule over a length of at least 200, 210, 220, 230, 240, 250, 260, 270, or 275 contiguous amino acids.
5. A method for producing a protease, comprising:
(i) substituting an amino acid at the position corresponding to position 130 in SEQ ID NO:1 with the amino acid substitution 130D in a starting protease having at least 95% sequence identity with the amino acid sequence given in SEQ ID NO:1 over its entire length, and
(ii) substituting an amino acid at at least one of the positions corresponding to positions 101, 133, 144, 224, 252, or 271 in SEQ ID NO:1 in a starting protease having at least 95% sequence identity with the amino acid sequence given in SEQ ID NO:1 over its entire length.
6. The method according to claim 5,
wherein the substituting the at least one amino acid at the position corresponding to position 130 is N130D based on the numbering according to SEQ ID NO: 1 and occurs by one-time or multiple conservative amino acid substitution; and wherein the substituting the amino acid at at least one of the positions corresponding to positions 101, 133, 144, 224, 252, or 271 in SEQ ID NO:1 is D101E, T133R, N144K, S224A, N252T, or Q271E, respectively and
optionally altering the amino acid sequence by fragmentation or deletion, insertion or substitution mutagenesis such that the protease comprises an amino acid sequence matching the starting molecule over a length of at least 200, 210, 220, 230, 240, 250, 260, 270, or 275 contiguous amino acids.
7. A nucleic acid coding for a protease according to claim 1.
8. A vector containing a nucleic acid according to claim 7.
9. A non-human host cell containing a nucleic acid according to claim 7.
10. A method for producing a protease, comprising
a) cultivating a host cell according to claim 9; and
11. A composition comprising:
at least one protease according to claim 1;
an agent comprising a washing agent, a cleaning agent, or combinations thereof; and
one or more surfactants.
12. The composition according to claim 11, wherein the at least one amino acid substitution according to (b) is selected from the group consisting of D101E, T133R, N144K, S224A, N252T, Q271E, or combinations thereof in each case based on the numbering according to SEQ ID NO: 1.
13. The composition of claim 11, wherein the protease comprises:
(A) one of the following amino acid substitution variants, in each case based on the numbering according to SEQ ID NO:1: (v) D101E, N130D, T133R, S224A, and Q271E; (vi) D101E, N130D, N144K, N252T, and Q271E; (vii) N130D, N144K, N252T and Q271E; or (viii) N130D, T133R, S224A and Q271E; and/or
14. A nucleic acid coding for a protease that can be obtained by a method according to claim 5.
15. An expression vector containing a nucleic acid according to claim 7.
16. A non-human host cell containing a vector according to claim 8.
17. A non-human host cell containing a protease according to claim 1.
18. A non-human host cell containing a protease obtainable by the method of claim 5.
10767142 September 8, 2020 Mussmann
20090170745 July 2, 2009 Merkel et al.
9628566 September 1996 WO
2007131656 November 2007 WO
2017162429 September 2017 WO
"Subtilisin Carlsberg; EC=3.4.21.62", Uniprot, Jul. 21, 1986, 3 pages.
Bryan, "Protein engineering of subtilisin", Biochimica et Biophysica Acta, 2000, pp. 203-222, vol. 1543, Issue 2.
Von Der Osten et al., "Protein engineering of subtilisins to improve stability in detergent formulations", Journal of Biotechnology, 1993, pp. 55-68, vol. 28, Issue 1.
Vojcic et al., "Advances in protease engineering for laundry detergents", New Biotechnology, 2015, pp. 629-634, vol. 32, No. 6.
International search report from parallel PCT Patent Application PCT/EP2018/073882 dated Nov. 14, 2018, 11 pages (for reference purposes only).
Office Action from parallel European patent application No. 18 765 857.0 dated Jun. 11, 2021 (33 pages).
Filed: Sep 5, 2018
Date of Patent: Sep 21, 2021
Assignee: Henkel AG & Co. KGaA (Duesseldorf)
Inventors: Nina Mussmann (Willich), Susanne Wieland (Dormagen/Zons), Daniela Herbst (Duesseldorf), Inken Prueser (Duesseldorf)
Primary Examiner: Tekchand Saidha
International Classification: C12N 9/54 (20060101); C11D 3/386 (20060101);