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Datasets:
imageomics
/
fish-vista

Tasks:
Image Classification
Image Segmentation
Modalities:
Image
Tabular
Text
Formats:
csv
Languages:
English
Size:
100K - 1M
ArXiv:
Tags:
fish
traits
processed
RGB
biology
image
Libraries:
Datasets
pandas
Dataset card Viewer Files Community
8
fish-vista
File size: 3,282 Bytes 
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@dataset{inhs,
    title ={INHS collections data} ,
    journal ={http://biocoll.inhs.illinois.edu/portal/index.php} ,
    year ={2022} 
}

@article{jfbm,
    title ={JFBM Bell Atlas} ,
    journal = {http://bellatlas.umn.edu/index.php} ,
    year = 2022
}

@article{ummz,
    title ={UMMZ University of Michigan Museum of Zoology, Division of Fishes},
    journal = {https://ipt.lsa.umich.edu/resource?r=ummz\_fish}
}

@article{umadison,
    title ={University of Wisconsin-Madison Zoological Museum - Fish} ,
    journal ={http://zoology.wisc.edu/uwzm/}
}

@article{fmnh,
    title ={FMNH Field Museum of Natural History (Zoology) Fish Collection} ,
    journal ={Field Museum. https://fmipt.fieldmuseum.org/ipt/resource?r=fmnh_fishes}
}

@article{osum,
    author ={Daly M, Johnson N} ,
    title ={Ohio State University Fish Division (OSUM)} ,
    journal ={Museum of Biological Diversity, The Ohio State University. Occurrence dataset, https://doi.org/10.15468/subsl8},
    year = 2018
}

@article{fishair,
    title ={Multimedia of Fish Specimen and associated metadata. Fish-AIR},
    journal ={Biology guided Neural Network. Tulane University Biodiversity Research Institute (https://fishair.org).}
}

@article{Morphbank,
    title ={Morphbank: Biological Imaging (https://www.morphbank.net/)} ,
    journal ={Florida State University, Department of Scientific Computing, Tallahassee, FL 32306-4026 USA.}
}
@article{glin,
    title ={Great Lakes Invasives Network Project},
journal = {https://greatlakesinvasives.org/portal/index.php}
}

@article{IDigBio,
    title ={iDigBio } ,
    journal ={http://www.idigbio.org/portal},
    year = {2020}
}

@incollection{mabee2018phenoscape,
  title={Phenoscape: semantic analysis of organismal traits and genes yields insights in evolutionary biology},
  author={Mabee, Paula M and Dahdul, Wasila M and Balhoff, James P and Lapp, Hilmar and Manda, Prashanti and Uyeda, Josef and Vision, Todd and Westerfield, Monte},
  booktitle={Application of Semantic Technology in Biodiversity Science},
  pages={207--224},
  year={2018},
  publisher={IOS Press}
}

@online{fishbase,
  author       = {Froese, R. and Pauly, D.},
  title        = {FishBase},
  year         = {2024},
  note         = {World Wide Web electronic publication. Version 02/2024},
  url          = {http://www.fishbase.org}
}

@article{edmunds2015phenoscape,
  title={Phenoscape: identifying candidate genes for evolutionary phenotypes},
  author={Edmunds, Richard C and Su, Baofeng and Balhoff, James P and Eames, B Frank and Dahdul, Wasila M and Lapp, Hilmar and Lundberg, John G and Vision, Todd J and Dunham, Rex A and Mabee, Paula M and others},
  journal={Molecular Biology and Evolution},
  volume={33},
  number={1},
  pages={13--24},
  year={2015},
  publisher={Society for Molecular Biology and Evolution}
}

@article{mabee2012500,
  title={500,000 fish phenotypes: The new informatics landscape for evolutionary and developmental biology of the vertebrate skeleton},
  author={Mabee, Paula and Balhoff, James P and Dahdul, Wasila M and Lapp, Hilmar and Midford, Peter E and Vision, Todd J and Westerfield, Monte},
  journal={Journal of Applied Ichthyology},
  volume={28},
  number={3},
  pages={300--305},
  year={2012},
  publisher={Wiley Online Library}
}