The Hotel New Otani Tokyo served as the outside for Osato Chemicals and the hotel 's gardens was used for scenes of the ninja training . Bōnotsu in Kagoshima served as the fishing village , the Kobe harbour was used for the dock fight and Mount Shinmoe @-@ dake in Kyūshū was used for the exteriors of SPECTRE 's headquarters . Large crowds was present in Japan to see the shooting . A Japanese fan began following Sean Connery with a camera , and the police was called several times to prevent invasions during shooting .