diff --git "a/Data/estimated_expression_meta.tsv" "b/Data/estimated_expression_meta.tsv" new file mode 100644--- /dev/null +++ "b/Data/estimated_expression_meta.tsv" @@ -0,0 +1,1525 @@ +study_accession run_accession is_paired n_reads n_reads_aligned_0_times n_reads_aligned_1_time n_reads_aligned_mutiple_times overall_alignment_percent run_time +ERP003431 ERR299572 TRUE 32277959 8439967 21862513 1975479 73.85 12339.32 +ERP003431 ERR299574 TRUE 14553444 2897430 10370661 1285353 80.09 8162.323 +ERP003431 ERR299576 TRUE 39402337 7637302 28001893 3763142 80.62 16026.57 +ERP003431 ERR299578 TRUE 71693587 24154937 43078825 4459825 66.31 25363.26 +ERP003431 ERR299580 TRUE 42124871 8098902 31173843 2852126 80.77 16636.04 +ERP003431 ERR299582 TRUE 46489938 9253209 34050438 3186291 80.1 18583.47 +ERP003431 ERR299584 TRUE 46171955 12040332 30561650 3569973 73.92 17337.49 +ERP003431 ERR299586 TRUE 45293245 8402329 33805220 3085696 81.45 18156.66 +ERP003431 ERR299588 TRUE 59381326 17100612 37860638 4420076 71.2 22151.65 +ERP003431 ERR299590 TRUE NA NA NA NA NA NA +ERP003431 ERR299592 TRUE 46169748 11968846 31217304 2983598 74.08 16144.07 +ERP003431 ERR299594 TRUE 23412405 4405033 17425932 1581440 81.19 9663.89 +SRP008146 SRR342865 FALSE 4157976 1614792 2144071 399113 61.16 563.145 +SRP008146 SRR342866 FALSE 3004402 1214608 1501111 288683 59.57 406.73 +SRP008146 SRR342867 FALSE 3548841 1258018 1883601 407222 64.55 493.407 +SRP008146 SRR342868 FALSE 6873217 2437486 3634767 800964 64.54 976.925 +SRP008146 SRR342869 FALSE 4969740 1862946 2623344 483450 62.51 670.555 +SRP008146 SRR342870 FALSE 6718179 2682304 3441403 594472 60.07 888.232 +SRP008146 SRR342871 FALSE 6868552 2558516 3619356 690680 62.75 1141.229 +SRP008146 SRR342872 FALSE 6006069 2219409 3159143 627517 63.05 991.631 +SRP008146 SRR342873 FALSE 5431547 1994159 2874469 562919 63.29 823.956 +SRP008146 SRR342874 FALSE 3543216 1369859 1794026 379331 61.34 455.897 +SRP008146 SRR342875 FALSE 3089252 1175558 1653675 260019 61.95 464.938 +SRP008146 SRR342876 FALSE 5682642 2251869 2952384 478389 60.37 896.366 +SRP008146 SRR342877 FALSE 4236969 1589044 2166712 481213 62.5 673.469 +SRP008146 SRR342878 FALSE 6262251 2318413 3224576 719262 62.98 900.738 +SRP008146 SRR342879 FALSE 4321927 1742410 2210230 369287 59.68 534.392 +SRP008146 SRR342880 FALSE 3094432 1430777 1423273 240382 53.76 436.026 +SRP008146 SRR342881 FALSE 6849546 2452081 3639461 758004 64.2 960.466 +SRP008146 SRR342882 FALSE 6776579 2231318 3677246 868015 67.07 926.78 +SRP008146 SRR342883 FALSE 5336388 1908606 2789703 638079 64.23 736.488 +SRP008146 SRR342884 FALSE 3537545 1361013 1788987 387545 61.53 543.819 +SRP015456 SRR639771 TRUE 4313286 316399 3536630 460257 92.66 1793.748 +SRP015456 SRR563267 TRUE 4482477 302670 3698500 481307 93.25 1939.375 +SRP015456 SRR563176 TRUE 4508275 306571 3717272 484432 93.2 1986.764 +SRP015456 SRR563221 TRUE 4392029 300761 3620241 471027 93.15 1633.782 +SRP015456 SRR649819 TRUE 4362451 322406 3575652 464393 92.61 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