I have identified a genomic region (CpG island) that is enriched for a characteristic of interest in the vast majority of my samples.After viewing it in the UCSC genome browser, I have confirmed that it does not overlap any annotated gene promoters, gene bodies, or retrotransposons, but am convinced that it is functionally interacting with something long range.Is there a publicly available visualization tool where I can input my genomic region and get a list of topologically associated domains from 3C or other chromatin-chromatin interaction data?
Visualization tools for 3C/Hi-C long-range interaction data?
software recommendation;visualization