1. A computerized method for image registration, the computerized method comprising: accessing a set of images to be registered through an automatic registration process; selecting an automatic registration process; applying the selected automatic registration process on the acquired set of images; receiving user input; incorporating the received user input into the current stage of the application of the selected registration process on the acquired set of images; and repeating the action of receiving and incorporating until the registration of the acquired set of images is within a predetermined condition.