1. A method for printing a three-dimensional part with an additive manufacturing system, the method comprising: providing a bitslice stack having a plurality of bitslices; printing a plurality of successive layers of the three-dimensional part with the additive manufacturing system based on the bitslices in the bitslice stack; measuring surface heights of the successive layers after each of the successive layers are printed; determining differences between the measured surface heights and predicted stack heights of the bitslices; identifying one or more topographical error regions based on the determined differences, wherein the one or more topographical error regions comprise one or more underfilled regions, one or more overfilled regions, or combinations thereof; and modifying the bitslice stack to compensate for the one or more topographical error regions.