qanastek commited on
Commit
62496cc
1 Parent(s): 6f5614c

Upload 3 files

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Files changed (2) hide show
  1. Biosses-BLUE.py +11 -8
  2. test_dataset.py +4 -4
Biosses-BLUE.py CHANGED
@@ -63,13 +63,13 @@ class Biosses(datasets.GeneratorBasedBuilder):
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  BUILDER_CONFIGS = [
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  datasets.BuilderConfig(
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- name = "default",
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  version = datasets.Version("0.2.0"),
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  description = f"The Biosses corpora",
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  )
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  ]
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- DEFAULT_CONFIG_NAME = "default"
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  def _info(self):
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  return datasets.DatasetInfo(
@@ -92,31 +92,34 @@ class Biosses(datasets.GeneratorBasedBuilder):
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  def _split_generators(self, dl_manager):
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  """Returns SplitGenerators."""
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- data_dir = dl_manager.download_and_extract(_URL)
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  return [
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  datasets.SplitGenerator(
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  name=datasets.Split.TRAIN,
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  gen_kwargs={
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- "corpus_path": Path(data_dir) / "data/BIOSSES/train.tsv",
 
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  },
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  ),
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  datasets.SplitGenerator(
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  name=datasets.Split.VALIDATION,
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  gen_kwargs={
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- "corpus_path": Path(data_dir) / "data/BIOSSES/dev.tsv",
 
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  },
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  ),
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  datasets.SplitGenerator(
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  name=datasets.Split.TEST,
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  gen_kwargs={
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- "corpus_path": Path(data_dir) / "data/BIOSSES/test.tsv",
 
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  },
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  ),
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  ]
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- def _generate_examples(self, corpus_path: Path):
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- df = pd.read_csv(corpus_path, sep="\t")
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  for index, r in df.iterrows():
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  BUILDER_CONFIGS = [
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  datasets.BuilderConfig(
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+ name = "biosses",
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  version = datasets.Version("0.2.0"),
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  description = f"The Biosses corpora",
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  )
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  ]
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+ DEFAULT_CONFIG_NAME = "biosses"
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  def _info(self):
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  return datasets.DatasetInfo(
 
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  def _split_generators(self, dl_manager):
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  """Returns SplitGenerators."""
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+ archive = dl_manager.download_and_extract(_URL)
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  return [
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  datasets.SplitGenerator(
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  name=datasets.Split.TRAIN,
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  gen_kwargs={
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+ "corpus_path": archive,
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+ "split": "train",
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  },
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  ),
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  datasets.SplitGenerator(
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  name=datasets.Split.VALIDATION,
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  gen_kwargs={
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+ "corpus_path": archive,
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+ "split": "dev",
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  },
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  ),
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  datasets.SplitGenerator(
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  name=datasets.Split.TEST,
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  gen_kwargs={
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+ "corpus_path": archive,
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+ "split": "test",
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  },
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  ),
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  ]
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+ def _generate_examples(self, corpus_path: Path, split: str):
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+ df = pd.read_csv(f"{corpus_path}/data/BIOSSES/{split}.tsv", sep="\t")
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  for index, r in df.iterrows():
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test_dataset.py CHANGED
@@ -5,13 +5,13 @@ from datasets import load_dataset, set_caching_enabled
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  # If you need to force clear the cache
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  # set_caching_enabled(False)
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- source = "Biosses.py"
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- # source = "qanastek/Biosses"
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  dataset = load_dataset(source)
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  # dataset = load_dataset(source, "default")
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  print(dataset)
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- f = dataset["validation"][0]
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- print(f)
 
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  # If you need to force clear the cache
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  # set_caching_enabled(False)
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+ source = "Biosses-BLUE.py"
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+ # source = "qanastek/Biosses-BLUE"
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  dataset = load_dataset(source)
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  # dataset = load_dataset(source, "default")
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  print(dataset)
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+ # f = dataset["validation"][0]
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+ # print(f)