The best way to find out which layer is correct, is to set the project CRS to EPSG:3857 with on-the-fly-reprojection enabled, then load a Google or Openstreetmap background via the OpenLayers plugin, then add your layers and check their layer CRS.

Then you see which layer ist placed on the right spot, and which might have a wrong CRS.



BTW this page http://gis.ny.gov/gateway/mg/2014/columbia/#sp notes that the data is in New York State Plane NAD 83 (2011), US Survey Feet , which is EPSG:2260 for Eastern New York. Sometimes QGIS misreads the units on guessing the CRS. You can use Set CRS for Layer to correct it.

What's going wrong when I reproject raster in EPSG:32115 in QGIS?
This should be a quick answer that I can't seem to find again.  A while ago, I found out that I can use a one line addition in the preamble to format the document to the IEEE standard. It wasn't a reference to a style sheet or something else, but was integrated into TexLive. What is it again?
