When using version 3.x of PDFlib, you should configure PDFlib with the option --enable-shared-pdflib.
Version 2.20 of pdflib has introduced more changes to its API and support for chinese and japanese fonts. This unfortunately causes some changes of the pdf module of php4 (not php3). If you use pdflib 2.20 handle the in memory generation of PDF documents with care. Until pdflib 3.0 is released it might be unstable. The encoding parameter of pdf_set_font() has changed to a string. This means that instead of e.g. 4 you have to use 'winansi'.