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README.md
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@@ -57,25 +57,37 @@ In the "image" folder, it contains 2 subfolders: "Fractured" and "Non-fractured"
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In the "Annotations" folder, it contains 4 subfolders: "COCO JSON", "PASCAL VOC", "VGG JSON", and "YOLO". Annotations are stored in their corresponding folders. More details can be read in ### Annotations section.
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In the "utilities" folder, it contains several programming scripts that could be used to convert the raw files to a more readable format. None of them were used in this dataset loader.
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The "dataset.csv" contains many basic variables for each image: <br />
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- **image_id
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- hand
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### Updated Dataset Schema
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In this dataset loader, certain existed variables are modified into specific Huggingface feature,
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- Image_path [string]: A string representing the file path for its corresponding image \
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- segmentation [list]: A list object contains the segmentation info for each fractured image \
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- bbox [list]: A list object contains the bounding box info for each fractured image \
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In the "Annotations" folder, it contains 4 subfolders: "COCO JSON", "PASCAL VOC", "VGG JSON", and "YOLO". Annotations are stored in their corresponding folders. More details can be read in ### Annotations section.
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In the "utilities" folder, it contains several programming scripts that could be used to convert the raw files to a more readable format. None of them were used in this dataset loader.
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The "dataset.csv" contains many basic variables for each image: <br />
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- **image_id [string]:** The unique identifier for each radiograph image in the dataset. <br />
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- **hand[int]:** A binary indicators (1 or 0) marking the presence of hand in the radiograph <br />
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- **leg [int]:** A binary indicators (1 or 0) marking the presence of leg in the radiograph <br />
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- **hip [int]:** A binary indicators (1 or 0) marking the presence of hip in the radiograph <br />
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- **shoulder [int]:** A binary indicator (1 or 0) marking the shoulder in the radiograph <br />
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- **mixed [int]:** A binary indicator of whether the image contains multiple body parts <br />
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- **hardware [int]:** A binary indicator marking the presence of medical hardware (i.e. screws or plates) in the image <br />
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- **multiscan [int]:** A binary indicator signifies whether the image is part of a set of multiple scans <br />
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- **fractured [int]:** A binary indicator of whether there is a fracture present in the image <br />
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- **fracture_count [int]:** The number of fractures present in the image <br />
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- **frontal [int]:** A binary indicator denoting the front orientation of the radiograph <br />
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- **lateral[int]:** A binary indicator denoting the side orientation of the radiograph <br />
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- **oblique [int]:** A binary indicator denoting denoting the angled orientation of the radiograph <br />
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### Updated Dataset Schema
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In this dataset loader, certain existed variables are extracted from the orginal "dataset.csv" and then modified into specific Huggingface feature class for clarity, for instance <em>ClassLabel<em>.
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Other important variables are extracted from other downloaded files in the "FracAtlas" zip file to present a more systematic and clean FracAtlas dataset.
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The full schema of the HuggingFace dataset loader is below:
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- **image_id [string]:** The unique identifier for each radiograph image in the dataset. <br />
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- **Image [image]:** A PIL image object denoting each X-ray image. This can be used to load the image file directly. <br />
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- **hand[ClassLabel]:** A binary indicators (1 or 0) marking the presence of hand in the radiograph <br />
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- **leg [ClassLabel]:** A binary indicators (1 or 0) marking the presence of leg in the radiograph <br />
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- **hip [int]:** A binary indicators (1 or 0) marking the presence of hip in the radiograph <br />
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- **shoulder [int]:** A binary indicator (1 or 0) marking the shoulder in the radiograph <br />
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- **mixed [int]:** A binary indicator of whether the image contains multiple body parts <br />
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- **hardware [int]:** A binary indicator marking the presence of medical hardware (i.e. screws or plates) in the image <br />
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- **multiscan [int]:** A binary indicator signifies whether the image is part of a set of multiple scans <br />
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- **fractured [int]:** A binary indicator of whether there is a fracture present in the image <br />
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- **fracture_count [int]:** The number of fractures present in the image <br />
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- Image_path [string]: A string representing the file path for its corresponding image \
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- segmentation [list]: A list object contains the segmentation info for each fractured image \
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- bbox [list]: A list object contains the bounding box info for each fractured image \
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