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End of training

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+ ---
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+ license: mit
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+ base_model: microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext
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+ tags:
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+ - generated_from_trainer
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+ metrics:
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+ - precision
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+ - recall
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+ - f1
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+ - accuracy
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+ model-index:
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+ - name: PubMedBERT_BC5CDR_NER_new
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+ results: []
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+ ---
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+
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+ <!-- This model card has been generated automatically according to the information the Trainer had access to. You
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+ should probably proofread and complete it, then remove this comment. -->
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+
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+ # PubMedBERT_BC5CDR_NER_new
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+
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+ This model is a fine-tuned version of [microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext](https://huggingface.co/microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext) on the None dataset.
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+ It achieves the following results on the evaluation set:
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+ - Loss: 0.0805
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+ - Precision: 0.9857
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+ - Recall: 0.9821
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+ - F1: 0.9839
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+ - Accuracy: 0.9769
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+
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+ ## Model description
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+
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+ More information needed
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+
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+ ## Intended uses & limitations
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+
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+ More information needed
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+
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+ ## Training and evaluation data
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+
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+ More information needed
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+
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+ ## Training procedure
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+
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+ ### Training hyperparameters
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+
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+ The following hyperparameters were used during training:
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+ - learning_rate: 2e-05
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+ - train_batch_size: 16
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+ - eval_batch_size: 16
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+ - seed: 42
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+ - optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
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+ - lr_scheduler_type: linear
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+ - num_epochs: 3
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+
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+ ### Training results
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+
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+ | Training Loss | Epoch | Step | Validation Loss | Precision | Recall | F1 | Accuracy |
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+ |:-------------:|:-----:|:----:|:---------------:|:---------:|:------:|:------:|:--------:|
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+ | No log | 1.0 | 286 | 0.0837 | 0.9831 | 0.9782 | 0.9806 | 0.9725 |
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+ | 0.126 | 2.0 | 572 | 0.0824 | 0.9847 | 0.9784 | 0.9815 | 0.9740 |
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+ | 0.126 | 3.0 | 858 | 0.0805 | 0.9857 | 0.9821 | 0.9839 | 0.9769 |
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+
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+
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+ ### Framework versions
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+
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+ - Transformers 4.35.2
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+ - Pytorch 2.1.0+cu121
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+ - Datasets 2.16.1
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+ - Tokenizers 0.15.0