judithrosell commited on
Commit
2ee01d0
1 Parent(s): ff72a1e

Training in progress, epoch 1

Browse files
config.json ADDED
@@ -0,0 +1,51 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "_name_or_path": "microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext",
3
+ "architectures": [
4
+ "BertForTokenClassification"
5
+ ],
6
+ "attention_probs_dropout_prob": 0.1,
7
+ "classifier_dropout": null,
8
+ "hidden_act": "gelu",
9
+ "hidden_dropout_prob": 0.1,
10
+ "hidden_size": 768,
11
+ "id2label": {
12
+ "0": "B-DNA",
13
+ "1": "B-RNA",
14
+ "2": "B-cell_line",
15
+ "3": "B-cell_type",
16
+ "4": "B-protein",
17
+ "5": "I-DNA",
18
+ "6": "I-RNA",
19
+ "7": "I-cell_line",
20
+ "8": "I-cell_type",
21
+ "9": "I-protein",
22
+ "10": "O"
23
+ },
24
+ "initializer_range": 0.02,
25
+ "intermediate_size": 3072,
26
+ "label2id": {
27
+ "B-DNA": 0,
28
+ "B-RNA": 1,
29
+ "B-cell_line": 2,
30
+ "B-cell_type": 3,
31
+ "B-protein": 4,
32
+ "I-DNA": 5,
33
+ "I-RNA": 6,
34
+ "I-cell_line": 7,
35
+ "I-cell_type": 8,
36
+ "I-protein": 9,
37
+ "O": 10
38
+ },
39
+ "layer_norm_eps": 1e-12,
40
+ "max_position_embeddings": 512,
41
+ "model_type": "bert",
42
+ "num_attention_heads": 12,
43
+ "num_hidden_layers": 12,
44
+ "pad_token_id": 0,
45
+ "position_embedding_type": "absolute",
46
+ "torch_dtype": "float32",
47
+ "transformers_version": "4.35.2",
48
+ "type_vocab_size": 2,
49
+ "use_cache": true,
50
+ "vocab_size": 30522
51
+ }
model.safetensors ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:518fd62735b66a0d78a03a198323eab3c45be037d16a7e7e854faefd8ebeab9d
3
+ size 435623772
runs/Dec24_21-55-03_a50f05eccd3d/events.out.tfevents.1703454904.a50f05eccd3d.688.0 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ccd3232056c0fe741b4f6ca6b28eb04b8caad1bd580de038ccdf94e88c58fa01
3
+ size 5330
special_tokens_map.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "cls_token": "[CLS]",
3
+ "mask_token": "[MASK]",
4
+ "pad_token": "[PAD]",
5
+ "sep_token": "[SEP]",
6
+ "unk_token": "[UNK]"
7
+ }
tokenizer.json ADDED
The diff for this file is too large to render. See raw diff
 
tokenizer_config.json ADDED
@@ -0,0 +1,57 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "added_tokens_decoder": {
3
+ "0": {
4
+ "content": "[PAD]",
5
+ "lstrip": false,
6
+ "normalized": false,
7
+ "rstrip": false,
8
+ "single_word": false,
9
+ "special": true
10
+ },
11
+ "1": {
12
+ "content": "[UNK]",
13
+ "lstrip": false,
14
+ "normalized": false,
15
+ "rstrip": false,
16
+ "single_word": false,
17
+ "special": true
18
+ },
19
+ "2": {
20
+ "content": "[CLS]",
21
+ "lstrip": false,
22
+ "normalized": false,
23
+ "rstrip": false,
24
+ "single_word": false,
25
+ "special": true
26
+ },
27
+ "3": {
28
+ "content": "[SEP]",
29
+ "lstrip": false,
30
+ "normalized": false,
31
+ "rstrip": false,
32
+ "single_word": false,
33
+ "special": true
34
+ },
35
+ "4": {
36
+ "content": "[MASK]",
37
+ "lstrip": false,
38
+ "normalized": false,
39
+ "rstrip": false,
40
+ "single_word": false,
41
+ "special": true
42
+ }
43
+ },
44
+ "clean_up_tokenization_spaces": true,
45
+ "cls_token": "[CLS]",
46
+ "do_basic_tokenize": true,
47
+ "do_lower_case": true,
48
+ "mask_token": "[MASK]",
49
+ "model_max_length": 1000000000000000019884624838656,
50
+ "never_split": null,
51
+ "pad_token": "[PAD]",
52
+ "sep_token": "[SEP]",
53
+ "strip_accents": null,
54
+ "tokenize_chinese_chars": true,
55
+ "tokenizer_class": "BertTokenizer",
56
+ "unk_token": "[UNK]"
57
+ }
training_args.bin ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4610c5f99e02e666a677c7306a9ff40cd02c8533d3da7ddb2ac44c5203ebc2d1
3
+ size 4600
vocab.txt ADDED
The diff for this file is too large to render. See raw diff