kbulutozler commited on
Commit
9dcde34
1 Parent(s): 52adaae

Update README.md

Browse files
Files changed (1) hide show
  1. README.md +25 -145
README.md CHANGED
@@ -1,77 +1,32 @@
1
  ---
2
  library_name: transformers
3
- tags: []
 
 
 
 
 
 
 
 
 
4
  ---
5
 
6
  # Model Card for Model ID
7
 
8
- <!-- Provide a quick summary of what the model is/does. -->
9
-
10
 
11
 
12
  ## Model Details
13
 
14
- ### Model Description
15
-
16
- <!-- Provide a longer summary of what this model is. -->
17
-
18
- This is the model card of a 🤗 transformers model that has been pushed on the Hub. This model card has been automatically generated.
19
-
20
- - **Developed by:** [More Information Needed]
21
- - **Funded by [optional]:** [More Information Needed]
22
- - **Shared by [optional]:** [More Information Needed]
23
- - **Model type:** [More Information Needed]
24
- - **Language(s) (NLP):** [More Information Needed]
25
- - **License:** [More Information Needed]
26
- - **Finetuned from model [optional]:** [More Information Needed]
27
 
28
  ### Model Sources [optional]
29
 
30
  <!-- Provide the basic links for the model. -->
31
 
32
- - **Repository:** [More Information Needed]
33
- - **Paper [optional]:** [More Information Needed]
34
- - **Demo [optional]:** [More Information Needed]
35
-
36
- ## Uses
37
-
38
- <!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
39
-
40
- ### Direct Use
41
-
42
- <!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
43
-
44
- [More Information Needed]
45
-
46
- ### Downstream Use [optional]
47
-
48
- <!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
49
-
50
- [More Information Needed]
51
-
52
- ### Out-of-Scope Use
53
-
54
- <!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
55
-
56
- [More Information Needed]
57
-
58
- ## Bias, Risks, and Limitations
59
 
60
- <!-- This section is meant to convey both technical and sociotechnical limitations. -->
61
 
62
- [More Information Needed]
63
-
64
- ### Recommendations
65
-
66
- <!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
67
-
68
- Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
69
-
70
- ## How to Get Started with the Model
71
-
72
- Use the code below to get started with the model.
73
-
74
- [More Information Needed]
75
 
76
  ## Training Details
77
 
@@ -79,121 +34,46 @@ Use the code below to get started with the model.
79
 
80
  <!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
81
 
82
- [More Information Needed]
83
 
84
  ### Training Procedure
85
 
86
  <!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
87
 
88
- #### Preprocessing [optional]
89
-
90
- [More Information Needed]
91
-
92
 
93
  #### Training Hyperparameters
94
 
95
  - **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
96
 
97
- #### Speeds, Sizes, Times [optional]
 
 
 
 
98
 
99
- <!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
100
-
101
- [More Information Needed]
102
 
103
  ## Evaluation
104
 
105
  <!-- This section describes the evaluation protocols and provides the results. -->
106
 
107
- ### Testing Data, Factors & Metrics
108
-
109
  #### Testing Data
110
 
111
  <!-- This should link to a Dataset Card if possible. -->
112
 
113
- [More Information Needed]
114
-
115
- #### Factors
116
-
117
- <!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
118
-
119
- [More Information Needed]
120
-
121
- #### Metrics
122
-
123
- <!-- These are the evaluation metrics being used, ideally with a description of why. -->
124
-
125
- [More Information Needed]
126
 
127
  ### Results
128
 
129
- [More Information Needed]
130
-
131
- #### Summary
132
-
133
-
134
 
135
- ## Model Examination [optional]
136
-
137
- <!-- Relevant interpretability work for the model goes here -->
138
-
139
- [More Information Needed]
140
 
141
  ## Environmental Impact
142
 
143
  <!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
144
 
145
- Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
146
-
147
- - **Hardware Type:** [More Information Needed]
148
- - **Hours used:** [More Information Needed]
149
- - **Cloud Provider:** [More Information Needed]
150
- - **Compute Region:** [More Information Needed]
151
- - **Carbon Emitted:** [More Information Needed]
152
-
153
- ## Technical Specifications [optional]
154
-
155
- ### Model Architecture and Objective
156
-
157
- [More Information Needed]
158
-
159
- ### Compute Infrastructure
160
-
161
- [More Information Needed]
162
-
163
- #### Hardware
164
-
165
- [More Information Needed]
166
-
167
- #### Software
168
-
169
- [More Information Needed]
170
-
171
- ## Citation [optional]
172
-
173
- <!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
174
-
175
- **BibTeX:**
176
-
177
- [More Information Needed]
178
-
179
- **APA:**
180
-
181
- [More Information Needed]
182
-
183
- ## Glossary [optional]
184
-
185
- <!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
186
-
187
- [More Information Needed]
188
-
189
- ## More Information [optional]
190
-
191
- [More Information Needed]
192
-
193
- ## Model Card Authors [optional]
194
-
195
- [More Information Needed]
196
-
197
- ## Model Card Contact
198
 
199
- [More Information Needed]
 
1
  ---
2
  library_name: transformers
3
+ tags:
4
+ - BC2GM
5
+ - NER
6
+ license: apache-2.0
7
+ language:
8
+ - en
9
+ metrics:
10
+ - seqeval
11
+ base_model:
12
+ - distilbert/distilbert-base-uncased
13
  ---
14
 
15
  # Model Card for Model ID
16
 
17
+ Fine-tuned distilbert model. Trained on train set of BC2GM dataset taken from [BLURB](https://microsoft.github.io/BLURB/tasks.html).
 
18
 
19
 
20
  ## Model Details
21
 
 
 
 
 
 
 
 
 
 
 
 
 
 
22
 
23
  ### Model Sources [optional]
24
 
25
  <!-- Provide the basic links for the model. -->
26
 
27
+ - **Repository:** https://github.com/kbulutozler/medical-llm-benchmark
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
28
 
 
29
 
 
 
 
 
 
 
 
 
 
 
 
 
 
30
 
31
  ## Training Details
32
 
 
34
 
35
  <!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
36
 
37
+ Train set of BC2GM dataset.
38
 
39
  ### Training Procedure
40
 
41
  <!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
42
 
43
+ Classical fine-tuning.
 
 
 
44
 
45
  #### Training Hyperparameters
46
 
47
  - **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
48
 
49
+ learning_rate=5e-5
50
+ per_device_train_batch_size=16
51
+ per_device_eval_batch_size=16
52
+ num_train_epochs=3
53
+ weight_decay=0.01
54
 
 
 
 
55
 
56
  ## Evaluation
57
 
58
  <!-- This section describes the evaluation protocols and provides the results. -->
59
 
 
 
60
  #### Testing Data
61
 
62
  <!-- This should link to a Dataset Card if possible. -->
63
 
64
+ Test set of BC2GM dataset.
 
 
 
 
 
 
 
 
 
 
 
 
65
 
66
  ### Results
67
 
68
+ Precision: 0.76
69
+ Recall: 0.79
70
+ Micro-F1: 0.77
 
 
71
 
 
 
 
 
 
72
 
73
  ## Environmental Impact
74
 
75
  <!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
76
 
77
+ - **Hardware Type:** 1xRTX A4000
78
+ - **Hours used:** 00:10:00
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
79