Spaces:
Sleeping
Sleeping
Decrease workload on CPUs
Browse files
app.py
CHANGED
@@ -72,9 +72,10 @@ def save_file(segmentation, path):
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def infer(image_path):
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with tempfile.TemporaryDirectory() as tmpdirname:
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-
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[image_path], tmpdirname, [0, 1, 2, 3, 4], cpu_only=False
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filename = add_postfix(Path(image_path).name, "seg")
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segmentation = sitk.ReadImage(tmpdirname + "/" + filename)
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@@ -124,13 +125,6 @@ with gr.Blocks(css=css, title="MRSegmentator") as iface:
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with gr.Column():
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overlay_image_np = gr.AnnotatedImage(label="Axial View")
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# pred_dict = gr.Label(label="Prediction")
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# explanation= gr.Textbox(label="Classification Decision")
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# with gr.Accordion("Additional Information", open=False):
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# gradcam = gr.Image(label="GradCAM")
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# cropped_boxed_array_disp = gr.Image(label="Bounding Box")
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input_file.change(
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utils.read_and_display,
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inputs=[input_file, image_state, seg_state],
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@@ -149,5 +143,4 @@ with gr.Blocks(css=css, title="MRSegmentator") as iface:
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if __name__ == "__main__":
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iface.queue()
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# iface.launch(server_name='0.0.0.0', server_port=8080)
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iface.launch()
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def infer(image_path):
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with tempfile.TemporaryDirectory() as tmpdirname:
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if torch.cuda.is_available():
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inference.infer([image_path], tmpdirname, [0, 1, 2, 3, 4], cpu_only=False, split_level=1)
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else:
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inference.infer([image_path], tmpdirname, [0], cpu_only=True, split_level=1)
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filename = add_postfix(Path(image_path).name, "seg")
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segmentation = sitk.ReadImage(tmpdirname + "/" + filename)
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with gr.Column():
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overlay_image_np = gr.AnnotatedImage(label="Axial View")
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input_file.change(
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utils.read_and_display,
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inputs=[input_file, image_state, seg_state],
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if __name__ == "__main__":
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iface.queue()
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iface.launch()
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