Spaces:
Sleeping
Sleeping
Merge pull request #3 from andreped/ui-fixes
Browse filesShow annotation objects in left sidebar; add zoom and position info to right sidebar; fix bug for certain annotation types
- index.html +111 -7
index.html
CHANGED
@@ -2,6 +2,8 @@
|
|
2 |
<head>
|
3 |
<title>Whole Slide Image Annotation</title>
|
4 |
|
|
|
|
|
5 |
<link rel="stylesheet" href="node_modules/@recogito/annotorious/dist/annotorious.min.css">
|
6 |
<link rel="stylesheet" href="node_modules/@recogito/annotorious-selector-pack/dist/annotorious-selector-pack.min.css">
|
7 |
|
@@ -12,21 +14,28 @@
|
|
12 |
<script src="https://cdn.jsdelivr.net/npm/@recogito/[email protected]/dist/annotorious-selector-pack.min.js"></script>
|
13 |
</head>
|
14 |
<body>
|
15 |
-
<div style="padding: 0 0em; height:
|
16 |
<div class="sidebar-left" style="float: left; width: 10%;">
|
17 |
-
<h1 style="color: white; font-size:
|
18 |
|
19 |
-
<hr style="border:
|
20 |
|
21 |
-
<div
|
22 |
-
|
|
|
|
|
|
|
23 |
</div>
|
24 |
<div id="wsi-canvas" style="float: left; width: 80%; height: 100%; background: white;"></div>
|
25 |
<div id="annotation-toolbar"></div>
|
26 |
|
27 |
<div class="sidebar-right" style="float: right; width: 10%;">
|
28 |
-
<
|
29 |
-
<
|
|
|
|
|
|
|
|
|
30 |
</div>
|
31 |
|
32 |
<div id="annotation_list" style="display: none;"></div>
|
@@ -70,6 +79,101 @@
|
|
70 |
document.getElementById('annotation-toolbar').addEventListener('click', function(event) {
|
71 |
event.preventDefault();
|
72 |
});
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
73 |
</script>
|
74 |
</body>
|
75 |
</html>
|
|
|
2 |
<head>
|
3 |
<title>Whole Slide Image Annotation</title>
|
4 |
|
5 |
+
<meta name="viewport" content="width=device-width, initial-scale=1.0, maximum-scale=1.0, user-scalable=no">
|
6 |
+
|
7 |
<link rel="stylesheet" href="node_modules/@recogito/annotorious/dist/annotorious.min.css">
|
8 |
<link rel="stylesheet" href="node_modules/@recogito/annotorious-selector-pack/dist/annotorious-selector-pack.min.css">
|
9 |
|
|
|
14 |
<script src="https://cdn.jsdelivr.net/npm/@recogito/[email protected]/dist/annotorious-selector-pack.min.js"></script>
|
15 |
</head>
|
16 |
<body>
|
17 |
+
<div style="padding: 0 0em; height: 100%; background: #303030">
|
18 |
<div class="sidebar-left" style="float: left; width: 10%;">
|
19 |
+
<h1 style="color: white; font-size: 16px; padding: 0 1.5em;">Whole Slide Image Annotation Demo</h1>
|
20 |
|
21 |
+
<hr style="border: 2px solid white;">
|
22 |
|
23 |
+
<div id="annotations-container">
|
24 |
+
<h2 style="color: white; padding: 0 0.5em; font-size: 14px;">Annotations</h2>
|
25 |
+
<hr style="border: 0.25px solid white;">
|
26 |
+
<div id="annotations-list"></div>
|
27 |
+
</div>
|
28 |
</div>
|
29 |
<div id="wsi-canvas" style="float: left; width: 80%; height: 100%; background: white;"></div>
|
30 |
<div id="annotation-toolbar"></div>
|
31 |
|
32 |
<div class="sidebar-right" style="float: right; width: 10%;">
|
33 |
+
<h2 style="color: white; padding: 0 0.5em; font-size: 14px;">Info</h2>
|
34 |
+
<hr style="border: 0.25px solid white;">
|
35 |
+
|
36 |
+
<div class="position" style="color: white; padding: 0 0.5em; font-size: 14px;"></div>
|
37 |
+
<hr style="border: 0.25px solid white;">
|
38 |
+
<div class="zoom" style="color: white; padding: 0 0.5em; font-size: 14px;"></div>
|
39 |
</div>
|
40 |
|
41 |
<div id="annotation_list" style="display: none;"></div>
|
|
|
79 |
document.getElementById('annotation-toolbar').addEventListener('click', function(event) {
|
80 |
event.preventDefault();
|
81 |
});
|
82 |
+
|
83 |
+
// Listen for annotation creation event
|
84 |
+
anno.on('createAnnotation', function(annotation) {
|
85 |
+
// Create a new div element for the annotation
|
86 |
+
var annotationItem = document.createElement('div');
|
87 |
+
annotationItem.className = 'annotation-item';
|
88 |
+
annotationItem.style.color = 'white';
|
89 |
+
annotationItem.style.padding = '10px';
|
90 |
+
annotationItem.style.border = '1px solid white';
|
91 |
+
annotationItem.style.marginTop = '10px';
|
92 |
+
annotationItem.style.cursor = 'pointer';
|
93 |
+
annotationItem.style.fontSize = '12px'; // Set font size in pixels
|
94 |
+
annotationItem.dataset.annotationId = annotation.id;
|
95 |
+
|
96 |
+
// Add annotation details to the item
|
97 |
+
annotationItem.innerHTML = `
|
98 |
+
${annotation.body[0].value}
|
99 |
+
`;
|
100 |
+
|
101 |
+
// Add click event to make the annotation active
|
102 |
+
annotationItem.addEventListener('click', function() {
|
103 |
+
anno.selectAnnotation(annotation.id);
|
104 |
+
});
|
105 |
+
|
106 |
+
// Append the annotation item to the annotations list in the sidebar
|
107 |
+
document.getElementById('annotations-list').appendChild(annotationItem);
|
108 |
+
});
|
109 |
+
|
110 |
+
// Listen for annotation deletion event
|
111 |
+
anno.on('deleteAnnotation', function(annotation) {
|
112 |
+
// Find the corresponding annotation item in the sidebar
|
113 |
+
var annotationItems = document.querySelectorAll('.annotation-item');
|
114 |
+
annotationItems.forEach(function(item) {
|
115 |
+
if (item.dataset.annotationId === annotation.id) {
|
116 |
+
item.remove();
|
117 |
+
}
|
118 |
+
});
|
119 |
+
});
|
120 |
+
|
121 |
+
// Disable panning when polygon tool is active
|
122 |
+
anno.on('startSelection', function(event) {
|
123 |
+
if (event.tool === 'polygon') {
|
124 |
+
viewer.setMouseNavEnabled(false);
|
125 |
+
}
|
126 |
+
});
|
127 |
+
|
128 |
+
// Re-enable panning when polygon tool is deactivated
|
129 |
+
anno.on('cancelSelection', function(event) {
|
130 |
+
if (event.tool === 'polygon') {
|
131 |
+
viewer.setMouseNavEnabled(true);
|
132 |
+
}
|
133 |
+
});
|
134 |
+
|
135 |
+
anno.on('createAnnotation', function(event) {
|
136 |
+
if (event.tool === 'polygon') {
|
137 |
+
viewer.setMouseNavEnabled(true);
|
138 |
+
}
|
139 |
+
});
|
140 |
+
|
141 |
+
// Add a listener to the viewer to update the position and zoom info
|
142 |
+
var positionEl = document.querySelectorAll('.sidebar-right .position')[0];
|
143 |
+
var zoomEl = document.querySelectorAll('.sidebar-right .zoom')[0];
|
144 |
+
|
145 |
+
// Default values
|
146 |
+
positionEl.innerHTML = 'Web:<br> (NA) <br><br>Viewport:<br> (NA) <br><br>Image:<br> (NA)';
|
147 |
+
zoomEl.innerHTML = 'Zoom:<br> NA <br><br>Image Zoom:<br> NA';
|
148 |
+
|
149 |
+
var updateZoom = function() {
|
150 |
+
var zoom = viewer.viewport.getZoom(true);
|
151 |
+
var imageZoom = viewer.viewport.viewportToImageZoom(zoom);
|
152 |
+
|
153 |
+
zoomEl.innerHTML = 'Zoom:<br>' + (Math.round(zoom * 100) / 100) +
|
154 |
+
'<br><br>Image Zoom:<br>' + (Math.round(imageZoom * 100) / 100);
|
155 |
+
}
|
156 |
+
|
157 |
+
viewer.addHandler('open', function() {
|
158 |
+
var tracker = new OpenSeadragon.MouseTracker({
|
159 |
+
element: viewer.container,
|
160 |
+
moveHandler: function(event) {
|
161 |
+
var webPoint = event.position;
|
162 |
+
var viewportPoint = viewer.viewport.pointFromPixel(webPoint);
|
163 |
+
var imagePoint = viewer.viewport.viewportToImageCoordinates(viewportPoint);
|
164 |
+
var zoom = viewer.viewport.getZoom(true);
|
165 |
+
var imageZoom = viewer.viewport.viewportToImageZoom(zoom);
|
166 |
+
|
167 |
+
positionEl.innerHTML = 'Web:<br>' + webPoint.toString() +
|
168 |
+
'<br><br>Viewport:<br>' + viewportPoint.toString() +
|
169 |
+
'<br><br>Image:<br>' + imagePoint.toString();
|
170 |
+
|
171 |
+
updateZoom();
|
172 |
+
}
|
173 |
+
});
|
174 |
+
tracker.setTracking(true);
|
175 |
+
viewer.addHandler('animation', updateZoom);
|
176 |
+
});
|
177 |
</script>
|
178 |
</body>
|
179 |
</html>
|