Thomas Chardonnens
baseline, wip
127130c
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"""A local gradio app that detects seizures with EEG using FHE."""
from PIL import Image
import os
import shutil
import subprocess
import time
import gradio as gr
import numpy
import requests
from itertools import chain
from common import (
CLIENT_TMP_PATH,
SERVER_TMP_PATH,
EXAMPLES,
INPUT_SHAPE,
KEYS_PATH,
REPO_DIR,
SERVER_URL,
)
from client_server_interface import FHEClient
# Uncomment here to have both the server and client in the same terminal
subprocess.Popen(["uvicorn", "server:app"], cwd=REPO_DIR)
time.sleep(3)
def shorten_bytes_object(bytes_object, limit=500):
"""Shorten the input bytes object to a given length.
Encrypted data is too large for displaying it in the browser using Gradio. This function
provides a shorten representation of it.
Args:
bytes_object (bytes): The input to shorten
limit (int): The length to consider. Default to 500.
Returns:
str: Hexadecimal string shorten representation of the input byte object.
"""
# Define a shift for better display
shift = 100
return bytes_object[shift : limit + shift].hex()
def get_client(user_id):
"""Get the client API.
Args:
user_id (int): The current user's ID.
Returns:
FHEClient: The client API.
"""
return FHEClient(
key_dir=KEYS_PATH / f"seizure_detection_{user_id}",
)
def get_client_file_path(name, user_id):
"""Get the correct temporary file path for the client.
Args:
name (str): The desired file name.
user_id (int): The current user's ID.
Returns:
pathlib.Path: The file path.
"""
return CLIENT_TMP_PATH / f"{name}_seizure_detection_{user_id}"
def clean_temporary_files(n_keys=20):
"""Clean keys and encrypted images.
A maximum of n_keys keys and associated temporary files are allowed to be stored. Once this
limit is reached, the oldest files are deleted.
Args:
n_keys (int): The maximum number of keys and associated files to be stored. Default to 20.
"""
# Get the oldest key files in the key directory
key_dirs = sorted(KEYS_PATH.iterdir(), key=os.path.getmtime)
# If more than n_keys keys are found, remove the oldest
user_ids = []
if len(key_dirs) > n_keys:
n_keys_to_delete = len(key_dirs) - n_keys
for key_dir in key_dirs[:n_keys_to_delete]:
user_ids.append(key_dir.name)
shutil.rmtree(key_dir)
# Get all the encrypted objects in the temporary folder
client_files = CLIENT_TMP_PATH.iterdir()
server_files = SERVER_TMP_PATH.iterdir()
# Delete all files related to the ids whose keys were deleted
for file in chain(client_files, server_files):
for user_id in user_ids:
if user_id in file.name:
file.unlink()
def keygen():
"""Generate the private key for seizure detection.
Returns:
(user_id, True) (Tuple[int, bool]): The current user's ID and a boolean used for visual display.
"""
# Clean temporary files
clean_temporary_files()
# Create an ID for the current user
user_id = numpy.random.randint(0, 2**32)
# Retrieve the client API
client = get_client(user_id)
# Generate a private key
client.generate_private_and_evaluation_keys(force=True)
# Retrieve the serialized evaluation key
evaluation_key = client.get_serialized_evaluation_keys()
# Save evaluation_key as bytes in a file as it is too large to pass through regular Gradio
# buttons (see https://github.com/gradio-app/gradio/issues/1877)
evaluation_key_path = get_client_file_path("evaluation_key", user_id)
with evaluation_key_path.open("wb") as evaluation_key_file:
evaluation_key_file.write(evaluation_key)
return (user_id, True)
def encrypt(user_id, input_image):
"""Encrypt the given image for seizure detection.
Args:
user_id (int): The current user's ID.
input_image (numpy.ndarray): The image to encrypt.
Returns:
(input_image, encrypted_image_short) (Tuple[bytes]): The encrypted image and one of its
representation.
"""
if user_id == "":
raise gr.Error("Please generate the private key first.")
if input_image is None:
raise gr.Error("Please choose an image first.")
if input_image.shape[-1] != 3:
raise ValueError(f"Input image must have 3 channels (RGB). Current shape: {input_image.shape}")
# Resize the image if it hasn't the shape (224, 224, 3)
if input_image.shape != (224, 224, 3):
input_image_pil = Image.fromarray(input_image)
input_image_pil = input_image_pil.resize((224, 224))
input_image = numpy.array(input_image_pil)
# Retrieve the client API
client = get_client(user_id)
# Pre-process, encrypt and serialize the image
encrypted_image = client.encrypt_serialize(input_image)
# Save encrypted_image to bytes in a file, since too large to pass through regular Gradio
# buttons, https://github.com/gradio-app/gradio/issues/1877
encrypted_image_path = get_client_file_path("encrypted_image", user_id)
with encrypted_image_path.open("wb") as encrypted_image_file:
encrypted_image_file.write(encrypted_image)
# Create a truncated version of the encrypted image for display
encrypted_image_short = shorten_bytes_object(encrypted_image)
return (resize_img(input_image), encrypted_image_short)
def send_input(user_id):
"""Send the encrypted input image as well as the evaluation key to the server.
Args:
user_id (int): The current user's ID.
"""
# Get the evaluation key path
evaluation_key_path = get_client_file_path("evaluation_key", user_id)
if user_id == "" or not evaluation_key_path.is_file():
raise gr.Error("Please generate the private key first.")
encrypted_input_path = get_client_file_path("encrypted_image", user_id)
if not encrypted_input_path.is_file():
raise gr.Error("Please generate the private key and then encrypt an image first.")
# Define the data and files to post
data = {
"user_id": user_id,
}
files = [
("files", open(encrypted_input_path, "rb")),
("files", open(evaluation_key_path, "rb")),
]
# Send the encrypted input image and evaluation key to the server
url = SERVER_URL + "send_input"
with requests.post(
url=url,
data=data,
files=files,
) as response:
return response.ok
def run_fhe(user_id):
"""Apply the seizure detection model on the encrypted image previously sent using FHE.
Args:
user_id (int): The current user's ID.
"""
data = {
"user_id": user_id,
}
# Trigger the FHE execution on the encrypted image previously sent
url = SERVER_URL + "run_fhe"
with requests.post(
url=url,
data=data,
) as response:
if response.ok:
return response.json()
else:
raise gr.Error("Please wait for the input image to be sent to the server.")
def get_output(user_id):
"""Retrieve the encrypted output (boolean).
Args:
user_id (int): The current user's ID.
Returns:
encrypted_output_short (bytes): A representation of the encrypted result.
"""
data = {
"user_id": user_id,
}
# Retrieve the encrypted output
url = SERVER_URL + "get_output"
with requests.post(
url=url,
data=data,
) as response:
if response.ok:
encrypted_output = response.content
# Save the encrypted output to bytes in a file as it is too large to pass through regular
# Gradio buttons (see https://github.com/gradio-app/gradio/issues/1877)
encrypted_output_path = get_client_file_path("encrypted_output", user_id)
with encrypted_output_path.open("wb") as encrypted_output_file:
encrypted_output_file.write(encrypted_output)
# Create a truncated version of the encrypted output for display
encrypted_output_short = shorten_bytes_object(encrypted_output)
return encrypted_output_short
else:
raise gr.Error("Please wait for the FHE execution to be completed.")
def decrypt_output(user_id):
"""Decrypt the result.
Args:
user_id (int): The current user's ID.
Returns:
bool: The decrypted output (True if seizure detected, False otherwise)
"""
if user_id == "":
raise gr.Error("Please generate the private key first.")
# Get the encrypted output path
encrypted_output_path = get_client_file_path("encrypted_output", user_id)
if not encrypted_output_path.is_file():
raise gr.Error("Please run the FHE execution first.")
# Load the encrypted output as bytes
with encrypted_output_path.open("rb") as encrypted_output_file:
encrypted_output = encrypted_output_file.read()
# Retrieve the client API
client = get_client(user_id)
# Deserialize, decrypt and post-process the encrypted output
decrypted_output = client.deserialize_decrypt_post_process(encrypted_output)
return "Seizure detected" if decrypted_output else "No seizure detected"
def resize_img(img, width=256, height=256):
"""Resize the image."""
if img.dtype != numpy.uint8:
img = img.astype(numpy.uint8)
img_pil = Image.fromarray(img)
# Resize the image
resized_img_pil = img_pil.resize((width, height))
# Convert back to a NumPy array
return numpy.array(resized_img_pil)
demo = gr.Blocks()
print("Starting the demo...")
with demo:
gr.Markdown(
"""
<h1 align="center">Seizure Detection on Encrypted EEG Data Using Fully Homomorphic Encryption</h1>
"""
)
gr.Markdown("## Client side")
gr.Markdown("### Step 1: Upload an EEG image. ")
gr.Markdown(
f"The image will automatically be resized to shape (224x224). "
"The image here, however, is displayed in its original resolution."
)
with gr.Row():
input_image = gr.Image(
value=None, label="Upload an EEG image here.", height=256,
width=256, sources="upload", interactive=True,
)
examples = gr.Examples(
examples=EXAMPLES, inputs=[input_image], examples_per_page=5, label="Examples to use."
)
gr.Markdown("### Step 2: Generate the private key.")
keygen_button = gr.Button("Generate the private key.")
with gr.Row():
keygen_checkbox = gr.Checkbox(label="Private key generated:", interactive=False)
user_id = gr.Textbox(label="", max_lines=2, interactive=False, visible=False)
gr.Markdown("### Step 3: Encrypt the image using FHE.")
encrypt_button = gr.Button("Encrypt the image using FHE.")
with gr.Row():
encrypted_input = gr.Textbox(
label="Encrypted input representation:", max_lines=2, interactive=False
)
gr.Markdown("## Server side")
gr.Markdown(
"The encrypted value is received by the server. The server can then compute the seizure "
"detection directly over encrypted values. Once the computation is finished, the server returns "
"the encrypted results to the client."
)
gr.Markdown("### Step 4: Send the encrypted image to the server.")
send_input_button = gr.Button("Send the encrypted image to the server.")
send_input_checkbox = gr.Checkbox(label="Encrypted image sent.", interactive=False)
gr.Markdown("### Step 5: Run FHE execution.")
execute_fhe_button = gr.Button("Run FHE execution.")
fhe_execution_time = gr.Textbox(
label="Total FHE execution time (in seconds):", max_lines=1, interactive=False
)
gr.Markdown("### Step 6: Receive the encrypted output from the server.")
get_output_button = gr.Button("Receive the encrypted output from the server.")
with gr.Row():
encrypted_output = gr.Textbox(
label="Encrypted output representation:",
max_lines=2,
interactive=False
)
gr.Markdown("## Client side")
gr.Markdown(
"The encrypted output is sent back to the client, who can finally decrypt it with the "
"private key. Only the client is aware of the original image and the detection result."
)
gr.Markdown("### Step 7: Decrypt the output.")
decrypt_button = gr.Button("Decrypt the output")
with gr.Row():
decrypted_output = gr.Textbox(
label="Seizure detection result:",
interactive=False
)
# Button to generate the private key
keygen_button.click(
keygen,
outputs=[user_id, keygen_checkbox],
)
# Button to encrypt inputs on the client side
encrypt_button.click(
encrypt,
inputs=[user_id, input_image],
outputs=[input_image, encrypted_input],
)
# Button to send the encodings to the server using post method
send_input_button.click(
send_input, inputs=[user_id], outputs=[send_input_checkbox]
)
# Button to send the encodings to the server using post method
execute_fhe_button.click(run_fhe, inputs=[user_id], outputs=[fhe_execution_time])
# Button to send the encodings to the server using post method
get_output_button.click(
get_output,
inputs=[user_id],
outputs=[encrypted_output]
)
# Button to decrypt the output on the client side
decrypt_button.click(
decrypt_output,
inputs=[user_id],
outputs=[decrypted_output],
)
gr.Markdown(
"The app was built with [Concrete-ML](https://github.com/zama-ai/concrete-ml), a "
"Privacy-Preserving Machine Learning (PPML) open-source set of tools by [Zama](https://zama.ai/). "
"Try it yourself and don't forget to star on Github &#11088;."
)
demo.launch(share=False)