Update app.py

app.py

@@ -91,6 +91,7 @@ df3["CHARTDATE_HADM_ID"] = df3["CHARTDATE"].astype(str) +' ('+ df3["HADM_ID"] +'
 df3["DIAGNOSIS"] = df3["DIAGNOSIS"].str.capitalize()
 df3["DISCHARGE_LOCATION"] = df3["DISCHARGE_LOCATION"].str.capitalize()
 
+df3["Diagnosis_Description"] =df3["Diagnosis_Description"].replace(r'\n','  \n ', regex=True)
 df3["TEXT"] =df3["TEXT"].replace(r'\n','  \n ', regex=True)
 df3["TEXT"] =df3["TEXT"].replace(r'#',' ', regex=True) 
 df3["BertSummarizer"] =df3["BertSummarizer"].replace(r'#',' ', regex=True) 
@@ -461,18 +462,30 @@ def DailyNarrative():
         
         #st.table(dailyNoteChange)  # testing to see if data calculate correctly 
         
+        annt_ls = []
+        for sent in dailyNarrativeText_split:
+            if '<br><br>' in sent:
+                break    # one item didn't complete the condition, get out of this loop
+            else:
+                end_index = dailyNarrativeText_split.index(sent) + 1
+                annt_ls.append(sent)
+        
+        non_annt_ls = dailyNarrativeText_split[end_index:]
+        
         with st.expander("See in detail"):
 
                              
                 ls = []
 
-                for sent in dailyNarrativeText_split:
+                for sent in annt_ls:
                     if sent in changeNote_split:
                         sent = sent.replace(str(sent),str(annotation(sent)))
                         ls.append(sent)
                     else:
                         ls.append(sent)
-                highlight = ' '.join(ls)
+                        
+                ls2 = ls + non_annt_ls
+                highlight = ' '.join(ls2)
                 st.markdown(highlight, unsafe_allow_html=True)