Use uv

.python-version

@@ -0,0 +1 @@
+3.10

pre-requirements.txt

@@ -1,2 +0,0 @@
-ragatouille==0.0.8.post2
-spacy==3.7.4

pyproject.toml

@@ -0,0 +1,17 @@
+[project]
+name = "daily-papers"
+version = "0.1.0"
+description = ""
+readme = "README.md"
+requires-python = ">=3.10"
+dependencies = [
+    "datasets>=2.21.0",
+    "gradio-calendar>=0.0.4",
+    "gradio>=4.44.0",
+    "hf-transfer>=0.1.8",
+    "huggingface-hub>=0.24.6",
+    "pandas>=2.2.2",
+    "ragatouille>=0.0.8.post4",
+    "setuptools>=74.1.2",
+    "tqdm>=4.66.5",
+]

requirements.txt

@@ -1,6 +1,570 @@
+# This file was autogenerated by uv via the following command:
+#    uv pip compile pyproject.toml -o requirements.txt
+aiofiles==23.2.1
+    # via gradio
+aiohappyeyeballs==2.4.0
+    # via aiohttp
+aiohttp==3.10.5
+    # via
+    #   datasets
+    #   fsspec
+    #   langchain
+    #   llama-index-core
+    #   llama-index-legacy
+aiosignal==1.3.1
+    # via aiohttp
+annotated-types==0.7.0
+    # via pydantic
+anyio==4.4.0
+    # via
+    #   gradio
+    #   httpx
+    #   openai
+    #   starlette
+async-timeout==4.0.3
+    # via
+    #   aiohttp
+    #   langchain
+attrs==24.2.0
+    # via aiohttp
+beautifulsoup4==4.12.3
+    # via llama-index-readers-file
+bitarray==2.9.2
+    # via colbert-ai
+blinker==1.8.2
+    # via flask
+catalogue==2.0.10
+    # via srsly
+certifi==2024.8.30
+    # via
+    #   httpcore
+    #   httpx
+    #   requests
+charset-normalizer==3.3.2
+    # via requests
+click==8.1.7
+    # via
+    #   flask
+    #   nltk
+    #   typer
+    #   uvicorn
+colbert-ai==0.2.19
+    # via ragatouille
+contourpy==1.3.0
+    # via matplotlib
+cycler==0.12.1
+    # via matplotlib
+dataclasses-json==0.6.7
+    # via
+    #   llama-index-core
+    #   llama-index-legacy
 datasets==2.21.0
+    # via
+    #   daily-papers (pyproject.toml)
+    #   colbert-ai
+deprecated==1.2.14
+    # via
+    #   llama-index-core
+    #   llama-index-legacy
+dill==0.3.8
+    # via
+    #   datasets
+    #   multiprocess
+dirtyjson==1.0.8
+    # via
+    #   llama-index-core
+    #   llama-index-legacy
+distro==1.9.0
+    # via openai
+exceptiongroup==1.2.2
+    # via anyio
+faiss-cpu==1.8.0.post1
+    # via ragatouille
+fast-pytorch-kmeans==0.2.0.1
+    # via ragatouille
+fastapi==0.114.0
+    # via gradio
+ffmpy==0.4.0
+    # via gradio
+filelock==3.16.0
+    # via
+    #   datasets
+    #   huggingface-hub
+    #   torch
+    #   transformers
+    #   triton
+flask==3.0.3
+    # via colbert-ai
+fonttools==4.53.1
+    # via matplotlib
+frozenlist==1.4.1
+    # via
+    #   aiohttp
+    #   aiosignal
+fsspec==2024.6.1
+    # via
+    #   datasets
+    #   gradio-client
+    #   huggingface-hub
+    #   llama-index-core
+    #   llama-index-legacy
+    #   torch
+git-python==1.0.3
+    # via colbert-ai
+gitdb==4.0.11
+    # via gitpython
+gitpython==3.1.43
+    # via git-python
 gradio==4.44.0
-gradio_calendar==0.0.4
-huggingface_hub==0.24.6
+    # via
+    #   daily-papers (pyproject.toml)
+    #   gradio-calendar
+gradio-calendar==0.0.4
+    # via daily-papers (pyproject.toml)
+gradio-client==1.3.0
+    # via gradio
+greenlet==3.1.0
+    # via sqlalchemy
+h11==0.14.0
+    # via
+    #   httpcore
+    #   uvicorn
+hf-transfer==0.1.8
+    # via daily-papers (pyproject.toml)
+httpcore==1.0.5
+    # via httpx
+httpx==0.27.2
+    # via
+    #   gradio
+    #   gradio-client
+    #   langsmith
+    #   llama-cloud
+    #   llama-index-core
+    #   llama-index-legacy
+    #   openai
+huggingface-hub==0.24.6
+    # via
+    #   daily-papers (pyproject.toml)
+    #   datasets
+    #   gradio
+    #   gradio-client
+    #   sentence-transformers
+    #   tokenizers
+    #   transformers
+idna==3.8
+    # via
+    #   anyio
+    #   httpx
+    #   requests
+    #   yarl
+importlib-resources==6.4.5
+    # via gradio
+itsdangerous==2.2.0
+    # via flask
+jinja2==3.1.4
+    # via
+    #   flask
+    #   gradio
+    #   torch
+jiter==0.5.0
+    # via openai
+joblib==1.4.2
+    # via
+    #   nltk
+    #   scikit-learn
+jsonpatch==1.33
+    # via langchain-core
+jsonpointer==3.0.0
+    # via jsonpatch
+kiwisolver==1.4.7
+    # via matplotlib
+langchain==0.2.16
+    # via ragatouille
+langchain-core==0.2.39
+    # via
+    #   langchain
+    #   langchain-text-splitters
+    #   ragatouille
+langchain-text-splitters==0.2.4
+    # via langchain
+langsmith==0.1.117
+    # via
+    #   langchain
+    #   langchain-core
+llama-cloud==0.0.17
+    # via llama-index-indices-managed-llama-cloud
+llama-index==0.11.8
+    # via ragatouille
+llama-index-agent-openai==0.3.1
+    # via
+    #   llama-index
+    #   llama-index-llms-openai
+    #   llama-index-program-openai
+llama-index-cli==0.3.1
+    # via llama-index
+llama-index-core==0.11.8
+    # via
+    #   llama-index
+    #   llama-index-agent-openai
+    #   llama-index-cli
+    #   llama-index-embeddings-openai
+    #   llama-index-indices-managed-llama-cloud
+    #   llama-index-llms-openai
+    #   llama-index-multi-modal-llms-openai
+    #   llama-index-program-openai
+    #   llama-index-question-gen-openai
+    #   llama-index-readers-file
+    #   llama-index-readers-llama-parse
+    #   llama-parse
+llama-index-embeddings-openai==0.2.4
+    # via
+    #   llama-index
+    #   llama-index-cli
+llama-index-indices-managed-llama-cloud==0.3.0
+    # via llama-index
+llama-index-legacy==0.9.48.post3
+    # via llama-index
+llama-index-llms-openai==0.2.3
+    # via
+    #   llama-index
+    #   llama-index-agent-openai
+    #   llama-index-cli
+    #   llama-index-multi-modal-llms-openai
+    #   llama-index-program-openai
+    #   llama-index-question-gen-openai
+llama-index-multi-modal-llms-openai==0.2.0
+    # via llama-index
+llama-index-program-openai==0.2.0
+    # via
+    #   llama-index
+    #   llama-index-question-gen-openai
+llama-index-question-gen-openai==0.2.0
+    # via llama-index
+llama-index-readers-file==0.2.1
+    # via llama-index
+llama-index-readers-llama-parse==0.3.0
+    # via llama-index
+llama-parse==0.5.5
+    # via llama-index-readers-llama-parse
+markdown-it-py==3.0.0
+    # via rich
+markupsafe==2.1.5
+    # via
+    #   gradio
+    #   jinja2
+    #   werkzeug
+marshmallow==3.22.0
+    # via dataclasses-json
+matplotlib==3.9.2
+    # via gradio
+mdurl==0.1.2
+    # via markdown-it-py
+mpmath==1.3.0
+    # via sympy
+multidict==6.1.0
+    # via
+    #   aiohttp
+    #   yarl
+multiprocess==0.70.16
+    # via datasets
+mypy-extensions==1.0.0
+    # via typing-inspect
+nest-asyncio==1.6.0
+    # via
+    #   llama-index-core
+    #   llama-index-legacy
+networkx==3.3
+    # via
+    #   llama-index-core
+    #   llama-index-legacy
+    #   torch
+ninja==1.11.1.1
+    # via colbert-ai
+nltk==3.9.1
+    # via
+    #   llama-index
+    #   llama-index-core
+    #   llama-index-legacy
+numpy==1.26.4
+    # via
+    #   contourpy
+    #   datasets
+    #   faiss-cpu
+    #   fast-pytorch-kmeans
+    #   gradio
+    #   langchain
+    #   llama-index-core
+    #   llama-index-legacy
+    #   matplotlib
+    #   onnx
+    #   pandas
+    #   pyarrow
+    #   scikit-learn
+    #   scipy
+    #   sentence-transformers
+    #   transformers
+    #   voyager
+nvidia-cublas-cu12==12.1.3.1
+    # via
+    #   nvidia-cudnn-cu12
+    #   nvidia-cusolver-cu12
+    #   torch
+nvidia-cuda-cupti-cu12==12.1.105
+    # via torch
+nvidia-cuda-nvrtc-cu12==12.1.105
+    # via torch
+nvidia-cuda-runtime-cu12==12.1.105
+    # via torch
+nvidia-cudnn-cu12==9.1.0.70
+    # via torch
+nvidia-cufft-cu12==11.0.2.54
+    # via torch
+nvidia-curand-cu12==10.3.2.106
+    # via torch
+nvidia-cusolver-cu12==11.4.5.107
+    # via torch
+nvidia-cusparse-cu12==12.1.0.106
+    # via
+    #   nvidia-cusolver-cu12
+    #   torch
+nvidia-nccl-cu12==2.20.5
+    # via torch
+nvidia-nvjitlink-cu12==12.6.68
+    # via
+    #   nvidia-cusolver-cu12
+    #   nvidia-cusparse-cu12
+nvidia-nvtx-cu12==12.1.105
+    # via torch
+onnx==1.16.2
+    # via ragatouille
+openai==1.44.1
+    # via
+    #   llama-index-agent-openai
+    #   llama-index-embeddings-openai
+    #   llama-index-legacy
+    #   llama-index-llms-openai
+orjson==3.10.7
+    # via
+    #   gradio
+    #   langsmith
+packaging==24.1
+    # via
+    #   datasets
+    #   faiss-cpu
+    #   gradio
+    #   gradio-client
+    #   huggingface-hub
+    #   langchain-core
+    #   marshmallow
+    #   matplotlib
+    #   transformers
 pandas==2.2.2
+    # via
+    #   daily-papers (pyproject.toml)
+    #   datasets
+    #   gradio
+    #   llama-index-legacy
+    #   llama-index-readers-file
+pillow==10.4.0
+    # via
+    #   gradio
+    #   llama-index-core
+    #   matplotlib
+    #   sentence-transformers
+protobuf==5.28.0
+    # via onnx
+pyarrow==17.0.0
+    # via datasets
+pydantic==2.9.1
+    # via
+    #   fastapi
+    #   gradio
+    #   langchain
+    #   langchain-core
+    #   langsmith
+    #   llama-cloud
+    #   llama-index-core
+    #   openai
+pydantic-core==2.23.3
+    # via pydantic
+pydub==0.25.1
+    # via gradio
+pygments==2.18.0
+    # via rich
+pynvml==11.5.3
+    # via fast-pytorch-kmeans
+pyparsing==3.1.4
+    # via matplotlib
+pypdf==4.3.1
+    # via llama-index-readers-file
+python-dateutil==2.9.0.post0
+    # via
+    #   matplotlib
+    #   pandas
+python-dotenv==1.0.1
+    # via colbert-ai
+python-multipart==0.0.9
+    # via gradio
+pytz==2024.2
+    # via pandas
+pyyaml==6.0.2
+    # via
+    #   datasets
+    #   gradio
+    #   huggingface-hub
+    #   langchain
+    #   langchain-core
+    #   llama-index-core
+    #   transformers
+ragatouille==0.0.8.post4
+    # via daily-papers (pyproject.toml)
+regex==2024.7.24
+    # via
+    #   nltk
+    #   tiktoken
+    #   transformers
+requests==2.32.3
+    # via
+    #   datasets
+    #   huggingface-hub
+    #   langchain
+    #   langsmith
+    #   llama-index-core
+    #   llama-index-legacy
+    #   tiktoken
+    #   transformers
+rich==13.8.1
+    # via typer
+ruff==0.6.4
+    # via gradio
+safetensors==0.4.5
+    # via transformers
+scikit-learn==1.5.1
+    # via sentence-transformers
+scipy==1.14.1
+    # via
+    #   colbert-ai
+    #   scikit-learn
+    #   sentence-transformers
+semantic-version==2.10.0
+    # via gradio
+sentence-transformers==2.7.0
+    # via ragatouille
+setuptools==74.1.2
+    # via daily-papers (pyproject.toml)
+shellingham==1.5.4
+    # via typer
+six==1.16.0
+    # via python-dateutil
+smmap==5.0.1
+    # via gitdb
+sniffio==1.3.1
+    # via
+    #   anyio
+    #   httpx
+    #   openai
+soupsieve==2.6
+    # via beautifulsoup4
+sqlalchemy==2.0.34
+    # via
+    #   langchain
+    #   llama-index-core
+    #   llama-index-legacy
+srsly==2.4.8
+    # via ragatouille
+starlette==0.38.5
+    # via fastapi
+striprtf==0.0.26
+    # via llama-index-readers-file
+sympy==1.13.2
+    # via torch
+tenacity==8.5.0
+    # via
+    #   langchain
+    #   langchain-core
+    #   llama-index-core
+    #   llama-index-legacy
+threadpoolctl==3.5.0
+    # via scikit-learn
+tiktoken==0.7.0
+    # via
+    #   llama-index-core
+    #   llama-index-legacy
+tokenizers==0.19.1
+    # via transformers
+tomlkit==0.12.0
+    # via gradio
+torch==2.4.1
+    # via
+    #   fast-pytorch-kmeans
+    #   ragatouille
+    #   sentence-transformers
 tqdm==4.66.5
+    # via
+    #   daily-papers (pyproject.toml)
+    #   colbert-ai
+    #   datasets
+    #   huggingface-hub
+    #   llama-index-core
+    #   nltk
+    #   openai
+    #   sentence-transformers
+    #   transformers
+transformers==4.44.2
+    # via
+    #   colbert-ai
+    #   ragatouille
+    #   sentence-transformers
+triton==3.0.0
+    # via torch
+typer==0.12.5
+    # via gradio
+typing-extensions==4.12.2
+    # via
+    #   anyio
+    #   fastapi
+    #   gradio
+    #   gradio-client
+    #   huggingface-hub
+    #   langchain-core
+    #   llama-index-core
+    #   llama-index-legacy
+    #   multidict
+    #   openai
+    #   pydantic
+    #   pydantic-core
+    #   pypdf
+    #   sqlalchemy
+    #   torch
+    #   typer
+    #   typing-inspect
+    #   uvicorn
+typing-inspect==0.9.0
+    # via
+    #   dataclasses-json
+    #   llama-index-core
+    #   llama-index-legacy
+tzdata==2024.1
+    # via pandas
+ujson==5.10.0
+    # via colbert-ai
+urllib3==2.2.2
+    # via
+    #   gradio
+    #   requests
+uvicorn==0.30.6
+    # via gradio
+voyager==2.0.9
+    # via ragatouille
+websockets==12.0
+    # via gradio-client
+werkzeug==3.0.4
+    # via flask
+wrapt==1.16.0
+    # via
+    #   deprecated
+    #   llama-index-core
+xxhash==3.5.0
+    # via datasets
+yarl==1.11.1
+    # via aiohttp