succ1 / file /README.md
jie1's picture
Upload 12 files
e1810a8
|
raw
history blame
1.58 kB
```
1. Sort 模块里,可以进行dlkcat,scores值的排序,选择相关文件,点击对应按钮,即可进行排序
2. Pre Merge 模块里,进行smile 与 seq序列文件的合并,
如若序列文件中的单条序列不是在一行而是分为多行的,需处理换行符,在strip_file上传文件,点击strip按钮,会生成新的序列文件,并且注意文件除了末尾可以有一行空行,其余地方不能有多余的空行
合并smile 与 seq 文件时,有两种情况:
一种是序列格式文件如下所示的:
>1J3U_A/1-468 Crystal structure of aspartase from Bacillus sp. YM55-1 [Bacillus sp. YM55-1]
MNTDVRIEKDFLGEKEIPKDAYYGVQTIRATENFPITGYRIHPELIKSLGIVKKSAALANMEVGLLDKEVGQ
YIVKAADEVIEGKWNDQFIVDPIQGGAGTSINMNANEVIANRALELMGEEKGNYSKISPNSHVNMSQSTNDA
FPTATHIAVLSLLNQLIETTKYMQQEFMKKADEFAGVIKMGRTHLQDAVPILLGQEFEAYARVIARDIERIA
NTRNNLYDINMGATAVGTGLNADPEYISIVTEHLAKFSGHPLRSAQHLVDATQNTDCYTEVSSALKVCMINM
SKIANDLRLMASGPRAGLSEIVLPARQPGSSIMPGKVNPVMPEVMNQVAFQVFGNDLTITSASEAGQFELNV
MEPVLFFNLIQSISIMTNVFKSFTENCLKGIKANEERMKEYVEKSIGIITAINPHVGYETAAKLAREAYLTG
ESIRELCIKYGVLTEEQLNEILNPYEMIHPGIAGRK
>WP_016839137.1/1-468 aspartate ammonia-lyase [Ureibacillus thermosphaericus]
MNTDVRIEKDFLGEKEIPKDAYYGVQTIRATENFPITGYRIHPELIKSLGIVKKSAALANMEVGLLDKEVGQ
YIVKAADEVIEGKWNDQFIVDPIQGGAGTSINMNANEVIANRALELMGEEKGNYSKISPNSHVNMSQSTNDA
合并时需要保存序列的来源这些相关信息,点击Merge All 按钮
另一种点击Merge按钮
3. Merge Dlsc 模块里,进行scores 与 Dlkcat文件的合并,合并时注意两个文件的序列相对应
```