mohdelgaar commited on
Commit
db283f8
1 Parent(s): 438cd32

update labels

Browse files
Files changed (2) hide show
  1. app.py +3 -3
  2. demo_assets.py +7 -7
app.py CHANGED
@@ -537,7 +537,7 @@ with gr.Blocks(head=shortcut_js,
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  title='MedDecXtract', css=css) as demo:
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  gr.Image('assets/logo.png', height=100, container=False, show_download_button=False)
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  gr.Markdown(title)
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- with gr.Tab("Label a Clinical Note"):
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  gr.Markdown(label_desc)
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  with gr.Row():
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  with gr.Column():
@@ -551,7 +551,7 @@ with gr.Blocks(head=shortcut_js,
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  gr.Markdown("## Labeled Summary or Note"),
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  text_out = gr.Highlight(label="", combine_adjacent=True, show_legend=False, color_map=color_map)
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  gr.Examples(text_examples, inputs=text_input)
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- with gr.Tab("Patient History Visualization"):
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  gr.Markdown(vis_desc)
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  with gr.Column():
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  sum_inputs = [gr.Text(label='Clinical Note 1', elem_classes='text-limit')]
@@ -578,7 +578,7 @@ with gr.Blocks(head=shortcut_js,
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  summary_button = gr.Button("Generate Summary")
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  with gr.Accordion('Summary'):
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  summary_output = gr.Markdown(elem_id='sum-out') #gr.Textbox(label="Summary")
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- with gr.Tab("Interactive Text Annotator"):
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  gr.Markdown(annotator_desc)
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  with gr.Row():
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  with gr.Column():
 
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  title='MedDecXtract', css=css) as demo:
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  gr.Image('assets/logo.png', height=100, container=False, show_download_button=False)
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  gr.Markdown(title)
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+ with gr.Tab("Decision Extraction & Classification"):
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  gr.Markdown(label_desc)
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  with gr.Row():
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  with gr.Column():
 
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  gr.Markdown("## Labeled Summary or Note"),
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  text_out = gr.Highlight(label="", combine_adjacent=True, show_legend=False, color_map=color_map)
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  gr.Examples(text_examples, inputs=text_input)
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+ with gr.Tab("Patient Visualization"):
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  gr.Markdown(vis_desc)
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  with gr.Column():
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  sum_inputs = [gr.Text(label='Clinical Note 1', elem_classes='text-limit')]
 
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  summary_button = gr.Button("Generate Summary")
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  with gr.Accordion('Summary'):
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  summary_output = gr.Markdown(elem_id='sum-out') #gr.Textbox(label="Summary")
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+ with gr.Tab("Interactive Narrative Annotator"):
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  gr.Markdown(annotator_desc)
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  with gr.Row():
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  with gr.Column():
demo_assets.py CHANGED
@@ -56,7 +56,7 @@ color_map = {cat: colors[i] for i,cat in enumerate(categories)}
56
 
57
 
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  annotator_desc = """
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- ## Interactive Text Annotator
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  This tool allows you to manually annotate medical text for detailed analysis and model training. Follow these steps:
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@@ -82,7 +82,7 @@ This tool allows you to manually annotate medical text for detailed analysis and
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  """
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  label_desc = """
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- ## Label a Clinical Note
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  This tool allows you to quickly identify and categorize key clinical decisions within a single clinical note.
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@@ -93,7 +93,7 @@ This tool allows you to quickly identify and categorize key clinical decisions w
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  This provides a simplified overview of the patient's history and key decisions at a glance.
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  """
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  vis_desc = """
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- ## Patient History Visualization
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  This tool allows you to visualize the timeline of clinical decisions across multiple clinical notes for a single patient.
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@@ -114,9 +114,9 @@ title = """
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  <h1 style="text-align: center;">Medical Decisions Extraction, Visualization, and Annotation</h1>
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  <p style="font-size:1.2em;">This application offers three interactive tools for working with clinical text data:</p>
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- <p style="font-size:1.2em;">1. <b>Label a Clinical Note:</b> Process individual notes and receive highlighted key clinical decisions.</br>
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- 2. <b>Patient History Visualization:</b> Upload multiple notes to visualize the timeline of decisions.</br>
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- 3. <b>Interactive Text Annotator:</b> Manually annotate text for detailed analysis and model training.</p>
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  """
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  desc = '### Decision Categories\n'
@@ -217,4 +217,4 @@ body {
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  --section-text-size: 16px;
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  --input-background: --neutral-50;
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  }
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- """
 
56
 
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  annotator_desc = """
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+ ## Interactive Narrative Annotator
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  This tool allows you to manually annotate medical text for detailed analysis and model training. Follow these steps:
62
 
 
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  """
83
 
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  label_desc = """
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+ ## Decision Extraction & Classification
86
 
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  This tool allows you to quickly identify and categorize key clinical decisions within a single clinical note.
88
 
 
93
  This provides a simplified overview of the patient's history and key decisions at a glance.
94
  """
95
  vis_desc = """
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+ ## Patient Visualization
97
 
98
  This tool allows you to visualize the timeline of clinical decisions across multiple clinical notes for a single patient.
99
 
 
114
  <h1 style="text-align: center;">Medical Decisions Extraction, Visualization, and Annotation</h1>
115
 
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  <p style="font-size:1.2em;">This application offers three interactive tools for working with clinical text data:</p>
117
+ <p style="font-size:1.2em;">1. <b>Decision Extraction & Classification:</b> Process individual notes and receive highlighted key clinical decisions.</br>
118
+ 2. <b>Patient Visualization:</b> Upload multiple notes to visualize the timeline of decisions.</br>
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+ 3. <b>Interactive Narrative Annotator:</b> Manually annotate text for detailed analysis and model training.</p>
120
  """
121
 
122
  desc = '### Decision Categories\n'
 
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  --section-text-size: 16px;
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  --input-background: --neutral-50;
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  }
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+ """