PULSE-7B / app.py
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Update app.py
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import subprocess
import sys
import os
# from .demo_modelpart import InferenceDemo
import gradio as gr
import os
from threading import Thread
# import time
import cv2
import datetime
# import copy
import torch
import spaces
import numpy as np
from llava import conversation as conversation_lib
from llava.constants import DEFAULT_IMAGE_TOKEN
from llava.constants import (
IMAGE_TOKEN_INDEX,
DEFAULT_IMAGE_TOKEN,
DEFAULT_IM_START_TOKEN,
DEFAULT_IM_END_TOKEN,
)
from llava.conversation import conv_templates, SeparatorStyle
from llava.model.builder import load_pretrained_model
from llava.utils import disable_torch_init
from llava.mm_utils import (
tokenizer_image_token,
process_images,
get_model_name_from_path,
KeywordsStoppingCriteria,
)
from serve_constants import html_header, bibtext, learn_more_markdown, tos_markdown
import requests
from PIL import Image
from io import BytesIO
from transformers import TextStreamer, TextIteratorStreamer
import hashlib
import PIL
import base64
import json
import datetime
import gradio as gr
import gradio_client
from huggingface_hub import HfApi
from huggingface_hub import login
from huggingface_hub import revision_exists
login(token=os.environ["HF_TOKEN"],
write_permission=True)
api = HfApi()
repo_name = os.environ["LOG_REPO"]
external_log_dir = "./logs"
LOGDIR = external_log_dir
VOTEDIR = "./votes"
def install_gradio_4_35_0():
current_version = gr.__version__
if current_version != "4.35.0":
print(f"Current Gradio version: {current_version}")
print("Installing Gradio 4.35.0...")
subprocess.check_call([sys.executable, "-m", "pip", "install", "gradio==4.35.0", "--force-reinstall"])
print("Gradio 4.35.0 installed successfully.")
else:
print("Gradio 4.35.0 is already installed.")
# Call the function to install Gradio 4.35.0 if needed
install_gradio_4_35_0()
import gradio as gr
import gradio_client
print(f"Gradio version: {gr.__version__}")
print(f"Gradio-client version: {gradio_client.__version__}")
def get_conv_log_filename():
t = datetime.datetime.now()
name = os.path.join(LOGDIR, f"{t.year}-{t.month:02d}-{t.day:02d}-user_conv.json")
return name
def get_conv_vote_filename():
t = datetime.datetime.now()
name = os.path.join(VOTEDIR, f"{t.year}-{t.month:02d}-{t.day:02d}-user_vote.json")
if not os.path.isfile(name):
os.makedirs(os.path.dirname(name), exist_ok=True)
return name
def vote_last_response(state, vote_type, model_selector):
with open(get_conv_vote_filename(), "a") as fout:
data = {
"type": vote_type,
"model": model_selector,
"state": state,
}
fout.write(json.dumps(data) + "\n")
api.upload_file(
path_or_fileobj=get_conv_vote_filename(),
path_in_repo=get_conv_vote_filename().replace("./votes/", ""),
repo_id=repo_name,
repo_type="dataset")
def upvote_last_response(state):
vote_last_response(state, "upvote", "PULSE-7B")
gr.Info("Thank you for your voting!")
return state
def downvote_last_response(state):
vote_last_response(state, "downvote", "PULSE-7B")
gr.Info("Thank you for your voting!")
return state
class InferenceDemo(object):
def __init__(
self, args, model_path, tokenizer, model, image_processor, context_len
) -> None:
disable_torch_init()
self.tokenizer, self.model, self.image_processor, self.context_len = (
tokenizer,
model,
image_processor,
context_len,
)
if "llama-2" in model_name.lower():
conv_mode = "llava_llama_2"
elif "v1" in model_name.lower() or "pulse" in model_name.lower():
conv_mode = "llava_v1"
elif "mpt" in model_name.lower():
conv_mode = "mpt"
elif "qwen" in model_name.lower():
conv_mode = "qwen_1_5"
else:
conv_mode = "llava_v0"
if args.conv_mode is not None and conv_mode != args.conv_mode:
print(
"[WARNING] the auto inferred conversation mode is {}, while `--conv-mode` is {}, using {}".format(
conv_mode, args.conv_mode, args.conv_mode
)
)
else:
args.conv_mode = conv_mode
self.conv_mode = conv_mode
self.conversation = conv_templates[args.conv_mode].copy()
self.num_frames = args.num_frames
class ChatSessionManager:
def __init__(self):
self.chatbot_instance = None
def initialize_chatbot(self, args, model_path, tokenizer, model, image_processor, context_len):
self.chatbot_instance = InferenceDemo(args, model_path, tokenizer, model, image_processor, context_len)
print(f"Initialized Chatbot instance with ID: {id(self.chatbot_instance)}")
def reset_chatbot(self):
self.chatbot_instance = None
def get_chatbot(self, args, model_path, tokenizer, model, image_processor, context_len):
if self.chatbot_instance is None:
self.initialize_chatbot(args, model_path, tokenizer, model, image_processor, context_len)
return self.chatbot_instance
def is_valid_video_filename(name):
video_extensions = ["avi", "mp4", "mov", "mkv", "flv", "wmv", "mjpeg"]
ext = name.split(".")[-1].lower()
if ext in video_extensions:
return True
else:
return False
def is_valid_image_filename(name):
image_extensions = ["jpg", "jpeg", "png", "bmp", "gif", "tiff", "webp", "heic", "heif", "jfif", "svg", "eps", "raw"]
ext = name.split(".")[-1].lower()
if ext in image_extensions:
return True
else:
return False
def sample_frames(video_file, num_frames):
video = cv2.VideoCapture(video_file)
total_frames = int(video.get(cv2.CAP_PROP_FRAME_COUNT))
interval = total_frames // num_frames
frames = []
for i in range(total_frames):
ret, frame = video.read()
pil_img = Image.fromarray(cv2.cvtColor(frame, cv2.COLOR_BGR2RGB))
if not ret:
continue
if i % interval == 0:
frames.append(pil_img)
video.release()
return frames
def load_image(image_file):
if image_file.startswith("http") or image_file.startswith("https"):
response = requests.get(image_file)
if response.status_code == 200:
image = Image.open(BytesIO(response.content)).convert("RGB")
else:
print("failed to load the image")
else:
print("Load image from local file")
print(image_file)
image = Image.open(image_file).convert("RGB")
return image
def clear_response(history):
for index_conv in range(1, len(history)):
# loop until get a text response from our model.
conv = history[-index_conv]
if not (conv[0] is None):
break
question = history[-index_conv][0]
history = history[:-index_conv]
return history, question
chat_manager = ChatSessionManager()
def clear_history(history):
chatbot_instance = chat_manager.get_chatbot(args, model_path, tokenizer, model, image_processor, context_len)
chatbot_instance.conversation = conv_templates[chatbot_instance.conv_mode].copy()
return None
def add_message(history, message):
# history=[]
# global our_chatbot
global chat_image_num
if not history:
history = []
our_chatbot = chat_manager.get_chatbot(args, model_path, tokenizer, model, image_processor, context_len)
# our_chatbot = InferenceDemo(
# args, model_path, tokenizer, model, image_processor, context_len
# )
chat_image_num = 0
print("# Add message message",message)
if len(message["files"]) <= 1:
for x in message["files"]:
history.append(((x,), None))
chat_image_num += 1
if chat_image_num > 1:
history = []
chat_manager.reset_chatbot()
our_chatbot = chat_manager.get_chatbot(args, model_path, tokenizer, model, image_processor, context_len)
# our_chatbot = InferenceDemo(
# args, model_path, tokenizer, model, image_processor, context_len
# )
chat_image_num = 0
for x in message["files"]:
history.append(((x,), None))
chat_image_num += 1
if message["text"] is not None:
history.append((message["text"], None))
print("### Not bigger than one history", history)
print("### Not bigger than one conv", our_chatbot.conversation)
print(f"### Chatbot instance ID: {id(our_chatbot)}")
return history, gr.MultimodalTextbox(value=None, interactive=False)#, our_chatbot
else:
for x in message["files"]:
history.append(((x,), None))
if message["text"] is not None:
history.append((message["text"], None))
print("### Bigger than one history", history)
print("### Bigger than one conv", our_chatbot.conversation)
return history, gr.MultimodalTextbox(value=None, interactive=False)#, our_chatbot
@spaces.GPU
def bot(history, temperature, top_p, max_output_tokens):
# global our_chatbot
# if not history:
# gr.Warning("Only one image can be uploaded in a conversation. Please reduce the number of images and start a new conversation.")
# return history
print("### turn start history",history)
our_chatbot = chat_manager.get_chatbot(args, model_path, tokenizer, model, image_processor, context_len)
print("### turn start conv",our_chatbot.conversation)
print(f"### Chatbot instance ID: {id(our_chatbot)}")
text = history[-1][0]
images_this_term = []
text_this_term = ""
# import pdb;pdb.set_trace()
num_new_images = 0
previous_image = False
for i, message in enumerate(history[:-1]):
if type(message[0]) is tuple:
if previous_image:
gr.Warning("Only one image can be uploaded in a conversation. Please reduce the number of images and start a new conversation.")
our_chatbot.conversation = conv_templates[our_chatbot.conv_mode].copy()
return None
# print("### message[0]",message[0])
# if len(message[0])>1:
# gr.Warning("Only one image can be uploaded in a conversation. Please reduce the number of images and start a new conversation.")
# return history
# else:
images_this_term.append(message[0][0])
if is_valid_video_filename(message[0][0]):
raise ValueError("Video is not supported")
num_new_images += our_chatbot.num_frames
elif is_valid_image_filename(message[0][0]):
print("#### Load image from local file",message[0][0])
num_new_images += 1
else:
raise ValueError("Invalid image file")
previous_image = True
else:
num_new_images = 0
previous_image = False
# for message in history[-i-1:]:
# images_this_term.append(message[0][0])
assert len(images_this_term) > 0, "must have an image"
# image_files = (args.image_file).split(',')
# image = [load_image(f) for f in images_this_term if f]
all_image_hash = []
all_image_path = []
for image_path in images_this_term:
with open(image_path, "rb") as image_file:
image_data = image_file.read()
image_hash = hashlib.md5(image_data).hexdigest()
all_image_hash.append(image_hash)
image = PIL.Image.open(image_path).convert("RGB")
t = datetime.datetime.now()
filename = os.path.join(
LOGDIR,
"serve_images",
f"{t.year}-{t.month:02d}-{t.day:02d}",
f"{image_hash}.jpg",
)
all_image_path.append(filename)
if not os.path.isfile(filename):
os.makedirs(os.path.dirname(filename), exist_ok=True)
print("image save to",filename)
image.save(filename)
image_list = []
for f in images_this_term:
if is_valid_video_filename(f):
image_list += sample_frames(f, our_chatbot.num_frames)
elif is_valid_image_filename(f):
image_list.append(load_image(f))
else:
raise ValueError("Invalid image file")
image_tensor = [
process_images([f], our_chatbot.image_processor, our_chatbot.model.config)[0]
.half()
.to(our_chatbot.model.device)
for f in image_list
]
image_tensor = torch.stack(image_tensor)
image_token = DEFAULT_IMAGE_TOKEN * num_new_images
# if our_chatbot.model.config.mm_use_im_start_end:
# inp = DEFAULT_IM_START_TOKEN + image_token + DEFAULT_IM_END_TOKEN + "\n" + inp
# else:
inp = text
inp = image_token + "\n" + inp
our_chatbot.conversation.append_message(our_chatbot.conversation.roles[0], inp)
# image = None
our_chatbot.conversation.append_message(our_chatbot.conversation.roles[1], None)
prompt = our_chatbot.conversation.get_prompt()
if len(images_this_term) == 0:
gr.Warning("You should upload an image. Please upload the image and try again.")
return history
# if len(images_this_term) > 1:
# gr.Warning("Only one image can be uploaded in a conversation. Please reduce the number of images and start a new conversation.")
# return history
input_ids = tokenizer_image_token(
prompt, our_chatbot.tokenizer, IMAGE_TOKEN_INDEX, return_tensors="pt"
).unsqueeze(0).to(our_chatbot.model.device)
stop_str = (
our_chatbot.conversation.sep
if our_chatbot.conversation.sep_style != SeparatorStyle.TWO
else our_chatbot.conversation.sep2
)
keywords = [stop_str]
stopping_criteria = KeywordsStoppingCriteria(
keywords, our_chatbot.tokenizer, input_ids
)
streamer = TextIteratorStreamer(
our_chatbot.tokenizer, skip_prompt=True, skip_special_tokens=True
)
print(our_chatbot.model.device)
print(input_ids.device)
print(image_tensor.device)
# our_chatbot.conversation.messages[-1][-1] = outputs
# history[-1] = [text, outputs]
# return history
generate_kwargs = dict(
inputs=input_ids,
streamer=streamer,
images=image_tensor,
do_sample=True,
temperature=temperature,
top_p=top_p,
max_new_tokens=max_output_tokens,
use_cache=False,
stopping_criteria=[stopping_criteria],
)
t = Thread(target=our_chatbot.model.generate, kwargs=generate_kwargs)
t.start()
outputs = []
for stream_token in streamer:
outputs.append(stream_token)
# print("### stream_token",stream_token)
# our_chatbot.conversation.messages[-1][-1] = "".join(outputs)
history[-1] = [text, "".join(outputs)]
yield history
our_chatbot.conversation.messages[-1][-1] = "".join(outputs)
print("### turn end history", history)
print("### turn end conv",our_chatbot.conversation)
with open(get_conv_log_filename(), "a") as fout:
data = {
"type": "chat",
"model": "PULSE-7b",
"state": history,
"images": all_image_hash,
"images_path": all_image_path
}
print("#### conv log",data)
fout.write(json.dumps(data) + "\n")
for upload_img in all_image_path:
api.upload_file(
path_or_fileobj=upload_img,
path_in_repo=upload_img.replace("./logs/", ""),
repo_id=repo_name,
repo_type="dataset",
# revision=revision,
# ignore_patterns=["data*"]
)
# upload json
api.upload_file(
path_or_fileobj=get_conv_log_filename(),
path_in_repo=get_conv_log_filename().replace("./logs/", ""),
repo_id=repo_name,
repo_type="dataset")
txt = gr.Textbox(
scale=4,
show_label=False,
placeholder="Enter text and press enter.",
container=False,
)
with gr.Blocks(
css=".message-wrap.svelte-1lcyrx4>div.svelte-1lcyrx4 img {min-width: 40px}",
) as demo:
cur_dir = os.path.dirname(os.path.abspath(__file__))
# gr.Markdown(title_markdown)
gr.HTML(html_header)
with gr.Column():
with gr.Accordion("Parameters", open=False) as parameter_row:
temperature = gr.Slider(
minimum=0.05,
maximum=1.0,
value=0.05,
step=0.1,
interactive=True,
label="Temperature",
)
top_p = gr.Slider(
minimum=0.0,
maximum=1.0,
value=1,
step=0.1,
interactive=True,
label="Top P",
)
max_output_tokens = gr.Slider(
minimum=0,
maximum=8192,
value=4096,
step=256,
interactive=True,
label="Max output tokens",
)
with gr.Row():
chatbot = gr.Chatbot([], elem_id="PULSE", bubble_full_width=False, height=750)
# our_chatbot = None
# our_chatbot = gr.Variable(None)
# our_chatbot = gr.State(None)
with gr.Row():
upvote_btn = gr.Button(value="πŸ‘ Upvote", interactive=True)
downvote_btn = gr.Button(value="πŸ‘Ž Downvote", interactive=True)
flag_btn = gr.Button(value="⚠️ Flag", interactive=True)
# stop_btn = gr.Button(value="⏹️ Stop Generation", interactive=True)
regenerate_btn = gr.Button(value="πŸ”„ Regenerate", interactive=True)
clear_btn = gr.Button(value="πŸ—‘οΈ Clear history", interactive=True)
chat_input = gr.MultimodalTextbox(
interactive=True,
file_types=["image"],
placeholder="Enter message or upload file...",
show_label=False,
submit_btn="πŸš€"
)
print(cur_dir)
gr.Examples(
examples_per_page=5,
examples=[
[
{
"files": [
f"{cur_dir}/examples/ecg_example2.png",
],
"text": "What are the main features in this ECG image?",
},
],
[
{
"files": [
f"{cur_dir}/examples/ecg_example1.jpg",
],
"text": "What can be inferred from the pattern of the qR complexes and rS complexes in the leads of this ECG image?",
},
]
],
inputs=[chat_input],
label="Image",
)
gr.Markdown(tos_markdown)
gr.Markdown(learn_more_markdown)
gr.Markdown(bibtext)
# chat_msg =
# chat_input.submit(
# add_message, [chatbot, chat_input], [chatbot, chat_input]
# ).then(bot, [chatbot,temperature, top_p, max_output_tokens], chatbot, api_name="bot_response").then(lambda: gr.MultimodalTextbox(interactive=True), None, [chat_input])
chat_input.submit(
add_message, [chatbot, chat_input], [chatbot, chat_input]
).then(bot, [chatbot, temperature, top_p, max_output_tokens], chatbot, api_name="bot_response").then(lambda: gr.MultimodalTextbox(interactive=True), None, [chat_input])
# chatbot.like(print_like_dislike, None, None)
clear_btn.click(
fn=clear_history, inputs=[chatbot], outputs=[chatbot], api_name="clear_all"
)
upvote_btn.click(
fn=upvote_last_response, inputs=chatbot, outputs=chatbot, api_name="upvote_last_response"
)
downvote_btn.click(
fn=downvote_last_response, inputs=chatbot, outputs=chatbot, api_name="downvote_last_response"
)
demo.queue()
if __name__ == "__main__":
import argparse
argparser = argparse.ArgumentParser()
argparser.add_argument("--server_name", default="0.0.0.0", type=str)
argparser.add_argument("--port", default="6123", type=str)
argparser.add_argument(
"--model_path", default="PULSE-ECG/PULSE-7B", type=str
)
# argparser.add_argument("--model-path", type=str, default="facebook/opt-350m")
argparser.add_argument("--model-base", type=str, default=None)
argparser.add_argument("--num-gpus", type=int, default=1)
argparser.add_argument("--conv-mode", type=str, default=None)
argparser.add_argument("--temperature", type=float, default=0.05)
argparser.add_argument("--max-new-tokens", type=int, default=1024)
argparser.add_argument("--num_frames", type=int, default=16)
argparser.add_argument("--load-8bit", action="store_true")
argparser.add_argument("--load-4bit", action="store_true")
argparser.add_argument("--debug", action="store_true")
args = argparser.parse_args()
model_path = args.model_path
filt_invalid = "cut"
model_name = get_model_name_from_path(args.model_path)
tokenizer, model, image_processor, context_len = load_pretrained_model(args.model_path, args.model_base, model_name, args.load_8bit, args.load_4bit)
print("### image_processor",image_processor)
# print("### model",model)
chat_image_num = 0
print("### tokenzier",tokenizer)
model=model.to(torch.device('cuda'))
# our_chatbot = None
demo.launch()